RNA–Protein interactions for RNA: ENST00000567188.5

CNOT1-211, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best)

Gene CNOT1, Length 7,830 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-211ENST00000567188 LRP6O75581 1613 aa6.73□□□□□ -1.33
CNOT1-211ENST00000567188 FSD2A1L4K1 749 aa6.73□□□□□ -1.33
CNOT1-211ENST00000567188 IL6STP40189 918 aaPredicted RBP6.73□□□□□ -1.33
CNOT1-211ENST00000567188 UBE2HP62256 183 aa6.73□□□□□ -1.33
CNOT1-211ENST00000567188 TNNI3KQ59H18 835 aa6.73□□□□□ -1.33
CNOT1-211ENST00000567188 NIM1KQ8IY84 436 aa6.73□□□□□ -1.33
CNOT1-211ENST00000567188 ARHGAP18Q8N392 663 aa6.73□□□□□ -1.33
CNOT1-211ENST00000567188 DONSONQ9NYP3 566 aa6.73□□□□□ -1.33
CNOT1-211ENST00000567188 HMG20BQ9P0W2 317 aa6.73□□□□□ -1.33
CNOT1-211ENST00000567188 FPGT-TNNI3KV9GXZ4 949 aa6.73□□□□□ -1.33
CNOT1-211ENST00000567188 TOP1P11387 765 aaKnown RBP6.73□□□□□ -1.33
CNOT1-211ENST00000567188 HIBADHP31937 336 aaKnown RBP6.73□□□□□ -1.33
CNOT1-211ENST00000567188 TMOD2Q9NZR1 351 aa6.73□□□□□ -1.33
CNOT1-211ENST00000567188 SAMD15Q9P1V8 674 aa6.73□□□□□ -1.33
CNOT1-211ENST00000567188 SUFUQ9UMX1 484 aa6.73□□□□□ -1.33
CNOT1-211ENST00000567188 MYO1BO43795 1136 aa6.73□□□□□ -1.33
CNOT1-211ENST00000567188 ACTN2P35609 894 aa6.73□□□□□ -1.33
CNOT1-211ENST00000567188 ZAP70P43403 619 aa6.73□□□□□ -1.33
CNOT1-211ENST00000567188 GBP5Q96PP8 586 aa6.73□□□□□ -1.33
CNOT1-211ENST00000567188 RIOK3O14730 519 aaKnown RBP6.73□□□□□ -1.33
CNOT1-211ENST00000567188 MAP3K12Q12852 859 aa6.73□□□□□ -1.33
CNOT1-211ENST00000567188 TERF2Q15554 542 aa6.73□□□□□ -1.33
CNOT1-211ENST00000567188 TGFBRAP1Q8WUH2 860 aa6.73□□□□□ -1.33
CNOT1-211ENST00000567188 PDRG1Q9NUG6 133 aa6.73□□□□□ -1.33
CNOT1-211ENST00000567188 HDAC9Q9UKV0 1011 aa6.73□□□□□ -1.33
CNOT1-211ENST00000567188 M0R2C6 588 aa6.73□□□□□ -1.33
CNOT1-211ENST00000567188 PFDN1O60925 122 aa6.73□□□□□ -1.33
CNOT1-211ENST00000567188 PCK1P35558 622 aa6.73□□□□□ -1.33
CNOT1-211ENST00000567188 ALS2CR12Q96Q35 445 aa6.73□□□□□ -1.33
CNOT1-211ENST00000567188 ZC3H12CQ9C0D7 883 aaKnown RBP6.73□□□□□ -1.33
CNOT1-211ENST00000567188 USO1O60763 962 aaKnown RBP6.72□□□□□ -1.33
CNOT1-211ENST00000567188 BEND3Q5T5X7 828 aa6.72□□□□□ -1.33
CNOT1-211ENST00000567188 ACTR5Q9H9F9 607 aaPredicted RBP6.72□□□□□ -1.33
CNOT1-211ENST00000567188 APBA1Q02410 837 aa6.72□□□□□ -1.33
CNOT1-211ENST00000567188 PPFIA1Q13136 1202 aa6.72□□□□□ -1.33
CNOT1-211ENST00000567188 LARP1BQ659C4 914 aaKnown RBP6.72□□□□□ -1.33
CNOT1-211ENST00000567188 NAA16Q6N069 864 aaPredicted RBP6.72□□□□□ -1.33
CNOT1-211ENST00000567188 NFAT5O94916 1531 aa6.72□□□□□ -1.33
CNOT1-211ENST00000567188 ARMC9Q7Z3E5 817 aa6.72□□□□□ -1.33
CNOT1-211ENST00000567188 PHLDB2Q86SQ0 1253 aa6.72□□□□□ -1.33
CNOT1-211ENST00000567188 LIMCH1Q9UPQ0 1083 aa6.72□□□□□ -1.33
CNOT1-211ENST00000567188 LDHBP07195 334 aaKnown RBP6.72□□□□□ -1.33
CNOT1-211ENST00000567188 OAS2P29728 719 aaKnown RBP6.72□□□□□ -1.33
CNOT1-211ENST00000567188 ALDH1B1P30837 517 aa6.72□□□□□ -1.33
CNOT1-211ENST00000567188 DBNDD2Q9BQY9 259 aa6.72□□□□□ -1.33
CNOT1-211ENST00000567188 ODF2LQ9ULJ1 636 aa6.72□□□□□ -1.33
CNOT1-211ENST00000567188 TNS2Q63HR2 1409 aa6.72□□□□□ -1.33
CNOT1-211ENST00000567188 SLIT3O75094 1523 aa6.72□□□□□ -1.33
CNOT1-211ENST00000567188 FGFR1OPO95684 399 aaKnown RBP6.72□□□□□ -1.33
CNOT1-211ENST00000567188 NLRP10Q86W26 655 aa6.72□□□□□ -1.33
CNOT1-211ENST00000567188 IRAK4Q9NWZ3 460 aa6.72□□□□□ -1.33
CNOT1-211ENST00000567188 MYO1CO00159 1063 aa6.72□□□□□ -1.33
CNOT1-211ENST00000567188 CHUKO15111 745 aa6.72□□□□□ -1.33
CNOT1-211ENST00000567188 SETDB1Q15047 1291 aa6.72□□□□□ -1.33
CNOT1-211ENST00000567188 PUM3Q15397 648 aaKnown RBP6.72□□□□□ -1.33
CNOT1-211ENST00000567188 TTC22Q5TAA0 569 aa6.72□□□□□ -1.33
CNOT1-211ENST00000567188 GMNNO75496 209 aa6.71□□□□□ -1.33
CNOT1-211ENST00000567188 MYCP01106 439 aaPredicted RBP6.71□□□□□ -1.33
CNOT1-211ENST00000567188 SNAP25P60880 206 aa6.71□□□□□ -1.33
CNOT1-211ENST00000567188 SLC9C2Q5TAH2 1124 aa6.71□□□□□ -1.33
CNOT1-211ENST00000567188 TAOK3Q9H2K8 898 aa6.71□□□□□ -1.33
CNOT1-211ENST00000567188 CXorf56Q9H5V9 222 aa6.71□□□□□ -1.33
CNOT1-211ENST00000567188 HMGB3O15347 200 aaKnown RBP6.71□□□□□ -1.33
CNOT1-211ENST00000567188 KIAA0825Q8IV33 1275 aa6.71□□□□□ -1.33
CNOT1-211ENST00000567188 ZNF444Q8N0Y2 327 aaPredicted RBP6.71□□□□□ -1.33
CNOT1-211ENST00000567188 GPR161Q8N6U8 529 aaKnown RBP6.71□□□□□ -1.33
CNOT1-211ENST00000567188 FAM71BQ8TC56 605 aa6.71□□□□□ -1.33
CNOT1-211ENST00000567188 ANKRD2Q9GZV1 360 aa6.71□□□□□ -1.33
CNOT1-211ENST00000567188 PPFIA2O75334 1257 aa6.71□□□□□ -1.34
CNOT1-211ENST00000567188 DPEP1P16444 411 aa6.71□□□□□ -1.34
CNOT1-211ENST00000567188 DYNLL1P63167 89 aaKnown RBP6.71□□□□□ -1.34
CNOT1-211ENST00000567188 LZICQ8WZA0 190 aa6.71□□□□□ -1.34
CNOT1-211ENST00000567188 MRFAP1L1Q96HT8 127 aa6.71□□□□□ -1.34
CNOT1-211ENST00000567188 NAPBQ9H115 298 aa6.71□□□□□ -1.34
CNOT1-211ENST00000567188 DNAI1Q9UI46 699 aa6.71□□□□□ -1.34
CNOT1-211ENST00000567188 RGS12O14924 1447 aa6.71□□□□□ -1.34
CNOT1-211ENST00000567188 YEATS4O95619 227 aa6.71□□□□□ -1.34
CNOT1-211ENST00000567188 SPATA5Q8NB90 893 aa6.71□□□□□ -1.34
CNOT1-211ENST00000567188 ATRIPQ8WXE1 791 aa6.71□□□□□ -1.34
CNOT1-211ENST00000567188 TCEANC2Q96MN5 208 aa6.71□□□□□ -1.34
CNOT1-211ENST00000567188 NHSL1Q5SYE7 1610 aa6.71□□□□□ -1.34
CNOT1-211ENST00000567188 NBPF26B4DH59 902 aa6.71□□□□□ -1.34
CNOT1-211ENST00000567188 NDUFAB1O14561 156 aa6.71□□□□□ -1.34
CNOT1-211ENST00000567188 MXRA7P84157 204 aa6.71□□□□□ -1.34
CNOT1-211ENST00000567188 KANK3Q6NY19 840 aa6.71□□□□□ -1.34
CNOT1-211ENST00000567188 NBPF10Q6P3W6 841 aaKnown RBP6.71□□□□□ -1.34
CNOT1-211ENST00000567188 MAPKAPK5Q8IW41 473 aa6.71□□□□□ -1.34
CNOT1-211ENST00000567188 NBPF15Q8N660 670 aa6.71□□□□□ -1.34
CNOT1-211ENST00000567188 RGS22Q8NE09 1264 aa6.71□□□□□ -1.34
CNOT1-211ENST00000567188 USP6NLQ92738 828 aa6.71□□□□□ -1.34
CNOT1-211ENST00000567188 RPGRIP1Q96KN7 1286 aa6.71□□□□□ -1.34
CNOT1-211ENST00000567188 OSBPL9Q96SU4 736 aa6.71□□□□□ -1.34
CNOT1-211ENST00000567188 RPS6KA4O75676 772 aa6.71□□□□□ -1.34
CNOT1-211ENST00000567188 ALDH1L1O75891 902 aa6.71□□□□□ -1.34
CNOT1-211ENST00000567188 SPA17Q15506 151 aa6.71□□□□□ -1.34
CNOT1-211ENST00000567188 CCDC110Q8TBZ0 833 aa6.71□□□□□ -1.34
CNOT1-211ENST00000567188 RNF181Q9P0P0 153 aa6.71□□□□□ -1.34
CNOT1-211ENST00000567188 ALS2Q96Q42 1657 aa6.71□□□□□ -1.34
CNOT1-211ENST00000567188 SH3TC1Q8TE82 1336 aa6.71□□□□□ -1.34
CNOT1-211ENST00000567188 C5P01031 1676 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms