RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 TBC1D8O95759 1140 aa24.64■■□□□ 1.53
SPSB3-208ENST00000566339 SART3Q15020 963 aaKnown RBP24.64■■□□□ 1.53
SPSB3-208ENST00000566339 MUM1L1Q5H9M0 696 aa24.64■■□□□ 1.53
SPSB3-208ENST00000566339 RAB11FIP4Q86YS3 637 aa24.64■■□□□ 1.53
SPSB3-208ENST00000566339 SEPT12Q8IYM1 358 aa24.64■■□□□ 1.53
SPSB3-208ENST00000566339 CEP112Q8N8E3 955 aa24.64■■□□□ 1.53
SPSB3-208ENST00000566339 LRP5O75197 1615 aa24.63■■□□□ 1.53
SPSB3-208ENST00000566339 ZNF532Q9HCE3 1301 aa24.63■■□□□ 1.53
SPSB3-208ENST00000566339 SLC20A2Q08357 652 aa24.63■■□□□ 1.53
SPSB3-208ENST00000566339 LDHAL6AQ6ZMR3 332 aa24.63■■□□□ 1.53
SPSB3-208ENST00000566339 SLC26A6Q9BXS9 759 aa24.63■■□□□ 1.53
SPSB3-208ENST00000566339 A0A0G2JS52 829 aa24.62■■□□□ 1.53
SPSB3-208ENST00000566339 APPP05067 770 aa24.62■■□□□ 1.53
SPSB3-208ENST00000566339 FECHP22830 423 aa24.62■■□□□ 1.53
SPSB3-208ENST00000566339 TXLNAP40222 546 aa24.62■■□□□ 1.53
SPSB3-208ENST00000566339 FAM98CQ17RN3 349 aaKnown RBP24.62■■□□□ 1.53
SPSB3-208ENST00000566339 DIS3L2Q8IYB7 885 aaKnown RBP24.62■■□□□ 1.53
SPSB3-208ENST00000566339 AIDAQ96BJ3 306 aa24.62■■□□□ 1.53
SPSB3-208ENST00000566339 IFIT3O14879 490 aaKnown RBP24.62■■□□□ 1.53
SPSB3-208ENST00000566339 PDE8BO95263 885 aa24.62■■□□□ 1.53
SPSB3-208ENST00000566339 SPATA1Q5VX52 437 aa24.62■■□□□ 1.53
SPSB3-208ENST00000566339 GIGYF2Q6Y7W6 1299 aaKnown RBP24.62■■□□□ 1.53
SPSB3-208ENST00000566339 STAG1Q8WVM7 1258 aa24.62■■□□□ 1.53
SPSB3-208ENST00000566339 PIH1D3Q9NQM4 214 aaKnown RBP24.62■■□□□ 1.53
SPSB3-208ENST00000566339 AATFQ9NY61 560 aaKnown RBP eCLIP24.62■■□□□ 1.53
SPSB3-208ENST00000566339 IQSEC3Q9UPP2 1182 aaPredicted RBP24.62■■□□□ 1.53
SPSB3-208ENST00000566339 ITIH6Q6UXX5 1313 aa24.61■■□□□ 1.53
SPSB3-208ENST00000566339 DOCK2Q92608 1830 aa24.61■■□□□ 1.53
SPSB3-208ENST00000566339 ACTN4O43707 911 aaKnown RBP24.61■■□□□ 1.53
SPSB3-208ENST00000566339 TOB1P50616 345 aaPredicted RBP24.61■■□□□ 1.53
SPSB3-208ENST00000566339 AKNAD1Q5T1N1 836 aa24.61■■□□□ 1.53
SPSB3-208ENST00000566339 TTLL11Q8NHH1 800 aa24.61■■□□□ 1.53
SPSB3-208ENST00000566339 SYTL4Q96C24 671 aaPredicted RBP24.61■■□□□ 1.53
SPSB3-208ENST00000566339 AK7Q96M32 723 aa24.61■■□□□ 1.53
SPSB3-208ENST00000566339 TULP2O00295 520 aa24.6■■□□□ 1.53
SPSB3-208ENST00000566339 EVA1CP58658 441 aa24.6■■□□□ 1.53
SPSB3-208ENST00000566339 RTN1Q16799 776 aa24.6■■□□□ 1.53
SPSB3-208ENST00000566339 SRGAP1Q7Z6B7 1085 aa24.6■■□□□ 1.53
SPSB3-208ENST00000566339 IFNL3Q8IZI9 196 aa24.6■■□□□ 1.53
SPSB3-208ENST00000566339 PDILTQ8N807 584 aa24.6■■□□□ 1.53
SPSB3-208ENST00000566339 WDR24Q96S15 920 aa24.6■■□□□ 1.53
SPSB3-208ENST00000566339 NAPBQ9H115 298 aa24.6■■□□□ 1.53
SPSB3-208ENST00000566339 ST7Q9NRC1 585 aa24.6■■□□□ 1.53
SPSB3-208ENST00000566339 SERTAD1Q9UHV2 236 aa24.6■■□□□ 1.53
SPSB3-208ENST00000566339 BRWD3Q6RI45 1802 aa24.6■■□□□ 1.53
SPSB3-208ENST00000566339 ITGA6P23229 1130 aa24.59■■□□□ 1.53
SPSB3-208ENST00000566339 CTSWP56202 376 aa24.59■■□□□ 1.53
SPSB3-208ENST00000566339 FMR1Q06787 632 aaKnown RBP eCLIP24.59■■□□□ 1.53
SPSB3-208ENST00000566339 PYM1Q9BRP8 204 aaKnown RBP24.59■■□□□ 1.53
SPSB3-208ENST00000566339 RNF41Q9H4P4 317 aaPredicted RBP24.59■■□□□ 1.53
SPSB3-208ENST00000566339 MYO1AQ9UBC5 1043 aa24.59■■□□□ 1.53
SPSB3-208ENST00000566339 SPATA31A5Q5VU36 1347 aa24.59■■□□□ 1.53
SPSB3-208ENST00000566339 MROH5Q6ZUA9 1318 aa24.59■■□□□ 1.53
SPSB3-208ENST00000566339 PNPLA7Q6ZV29 1317 aa24.59■■□□□ 1.53
SPSB3-208ENST00000566339 SPATA31A7Q8IWB4 1347 aa24.59■■□□□ 1.53
SPSB3-208ENST00000566339 CHD4Q14839 1912 aa24.59■■□□□ 1.53
SPSB3-208ENST00000566339 POLR2DO15514 142 aaKnown RBP24.59■■□□□ 1.53
SPSB3-208ENST00000566339 ONECUT3O60422 494 aaPredicted RBP24.59■■□□□ 1.53
SPSB3-208ENST00000566339 PBX1P40424 430 aa24.59■■□□□ 1.53
SPSB3-208ENST00000566339 USP5P45974 858 aa24.59■■□□□ 1.53
SPSB3-208ENST00000566339 MAP3K12Q12852 859 aa24.59■■□□□ 1.53
SPSB3-208ENST00000566339 SMC1AQ14683 1233 aaKnown RBP24.59■■□□□ 1.53
SPSB3-208ENST00000566339 FILIP1LQ4L180 1135 aa24.59■■□□□ 1.53
SPSB3-208ENST00000566339 LPIN2Q92539 896 aa24.59■■□□□ 1.53
SPSB3-208ENST00000566339 EXOC4Q96A65 974 aa24.59■■□□□ 1.53
SPSB3-208ENST00000566339 CNNM1Q9NRU3 951 aa24.59■■□□□ 1.53
SPSB3-208ENST00000566339 ZSWIM5Q9P217 1185 aa24.59■■□□□ 1.53
SPSB3-208ENST00000566339 BTBD18B2RXH4 712 aa24.58■■□□□ 1.53
SPSB3-208ENST00000566339 IDH1O75874 414 aaKnown RBP24.58■■□□□ 1.53
SPSB3-208ENST00000566339 XBP1P17861 261 aa24.58■■□□□ 1.53
SPSB3-208ENST00000566339 PI16Q6UXB8 463 aa24.58■■□□□ 1.53
SPSB3-208ENST00000566339 TOGARAM2Q6ZUX3 1019 aa24.58■■□□□ 1.53
SPSB3-208ENST00000566339 SH3RF1Q7Z6J0 888 aa24.58■■□□□ 1.53
SPSB3-208ENST00000566339 PPFIBP1Q86W92 1011 aa24.58■■□□□ 1.53
SPSB3-208ENST00000566339 GSDMAQ96QA5 445 aa24.58■■□□□ 1.53
SPSB3-208ENST00000566339 PARD6BQ9BYG5 372 aa24.58■■□□□ 1.53
SPSB3-208ENST00000566339 NACAP1Q9BZK3 213 aa24.58■■□□□ 1.53
SPSB3-208ENST00000566339 ERICH2A1L162 156 aa24.57■■□□□ 1.52
SPSB3-208ENST00000566339 MAP2K7O14733 419 aa24.57■■□□□ 1.52
SPSB3-208ENST00000566339 KIF5CO60282 957 aa24.57■■□□□ 1.52
SPSB3-208ENST00000566339 PUM3Q15397 648 aaKnown RBP24.57■■□□□ 1.52
SPSB3-208ENST00000566339 MFSD6Q6ZSS7 791 aa24.57■■□□□ 1.52
SPSB3-208ENST00000566339 CNGA4Q8IV77 575 aa24.57■■□□□ 1.52
SPSB3-208ENST00000566339 CRACR2BQ8N4Y2 399 aaPredicted RBP24.57■■□□□ 1.52
SPSB3-208ENST00000566339 MSANTD4Q8NCY6 345 aa24.57■■□□□ 1.52
SPSB3-208ENST00000566339 FAM89AQ96GI7 184 aa24.57■■□□□ 1.52
SPSB3-208ENST00000566339 RNF26Q9BY78 433 aaPredicted RBP24.57■■□□□ 1.52
SPSB3-208ENST00000566339 FUT8Q9BYC5 575 aa24.57■■□□□ 1.52
SPSB3-208ENST00000566339 CDC23Q9UJX2 597 aa24.57■■□□□ 1.52
SPSB3-208ENST00000566339 RAB21Q9UL25 225 aa24.57■■□□□ 1.52
SPSB3-208ENST00000566339 TTF2Q9UNY4 1162 aaKnown RBP24.57■■□□□ 1.52
SPSB3-208ENST00000566339 FGFR2P21802 821 aa24.57■■□□□ 1.52
SPSB3-208ENST00000566339 RASGRP2Q7LDG7 609 aa24.57■■□□□ 1.52
SPSB3-208ENST00000566339 FERMT2Q96AC1 680 aa24.57■■□□□ 1.52
SPSB3-208ENST00000566339 ADGRG1Q9Y653 693 aa24.57■■□□□ 1.52
SPSB3-208ENST00000566339 WNK3Q9BYP7 1800 aa24.56■■□□□ 1.52
SPSB3-208ENST00000566339 ERLIN1O75477 346 aa24.56■■□□□ 1.52
SPSB3-208ENST00000566339 STARD3NLO95772 234 aa24.56■■□□□ 1.52
SPSB3-208ENST00000566339 OAS2P29728 719 aaKnown RBP24.56■■□□□ 1.52
SPSB3-208ENST00000566339 TRIM14Q14142 442 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms