RNA–Protein interactions for RNA: ENST00000566239.1

HACD3-208, Transcript of 3-hydroxyacyl-CoA dehydratase 3, humanhuman

TSL 2

Gene HACD3, Length 393 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3-208ENST00000566239 TMOD4Q9NZQ9 345 aa16.24■□□□□ 0.19
HACD3-208ENST00000566239 C19orf81C9J6K1 198 aa16.23■□□□□ 0.19
HACD3-208ENST00000566239 CCL5P13501 91 aa16.23■□□□□ 0.19
HACD3-208ENST00000566239 FLT3LGP49771 235 aa16.23■□□□□ 0.19
HACD3-208ENST00000566239 IRF5Q13568 498 aa16.23■□□□□ 0.19
HACD3-208ENST00000566239 MTMR2Q13614 643 aa16.23■□□□□ 0.19
HACD3-208ENST00000566239 PXYLP1Q8TE99 480 aa16.23■□□□□ 0.19
HACD3-208ENST00000566239 RNF208Q9H0X6 261 aa16.23■□□□□ 0.19
HACD3-208ENST00000566239 ANTXR1Q9H6X2 564 aa16.23■□□□□ 0.19
HACD3-208ENST00000566239 DNAJC18Q9H819 358 aa16.23■□□□□ 0.19
HACD3-208ENST00000566239 COG6Q9Y2V7 657 aa16.23■□□□□ 0.19
HACD3-208ENST00000566239 NDUFB9Q9Y6M9 179 aa16.23■□□□□ 0.19
HACD3-208ENST00000566239 PLXNB2O15031 1838 aa16.22■□□□□ 0.19
HACD3-208ENST00000566239 USP17L10C9JJH3 530 aa16.22■□□□□ 0.19
HACD3-208ENST00000566239 APBB1O00213 710 aa16.22■□□□□ 0.19
HACD3-208ENST00000566239 GDF11O95390 407 aa16.22■□□□□ 0.19
HACD3-208ENST00000566239 GJB1P08034 283 aa16.22■□□□□ 0.19
HACD3-208ENST00000566239 BACE1P56817 501 aa16.22■□□□□ 0.19
HACD3-208ENST00000566239 IRX3P78415 501 aaPredicted RBP16.22■□□□□ 0.19
HACD3-208ENST00000566239 TTC6Q86TZ1 520 aa16.22■□□□□ 0.19
HACD3-208ENST00000566239 ASCC2Q9H1I8 757 aaPredicted RBP16.22■□□□□ 0.19
HACD3-208ENST00000566239 ZBTB21Q9ULJ3 1066 aa16.22■□□□□ 0.19
HACD3-208ENST00000566239 IFIT2P09913 472 aaKnown RBP16.21■□□□□ 0.19
HACD3-208ENST00000566239 GJA8P48165 433 aa16.21■□□□□ 0.19
HACD3-208ENST00000566239 ZBTB40Q9NUA8 1239 aa16.21■□□□□ 0.19
HACD3-208ENST00000566239 RCAN3Q9UKA8 241 aa16.21■□□□□ 0.19
HACD3-208ENST00000566239 TAOK2Q9UL54 1235 aa16.21■□□□□ 0.19
HACD3-208ENST00000566239 BAZ2AQ9UIF9 1905 aaKnown RBP16.2■□□□□ 0.18
HACD3-208ENST00000566239 RAB11FIP3O75154 756 aa16.2■□□□□ 0.18
HACD3-208ENST00000566239 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.2■□□□□ 0.18
HACD3-208ENST00000566239 SHISA4Q96DD7 197 aa16.2■□□□□ 0.18
HACD3-208ENST00000566239 EHD4Q9H223 541 aa16.2■□□□□ 0.18
HACD3-208ENST00000566239 SERPINB13Q9UIV8 391 aa16.2■□□□□ 0.18
HACD3-208ENST00000566239 BRCA2P51587 3418 aa16.19■□□□□ 0.18
HACD3-208ENST00000566239 MAGEB6P1A0A0J9YX57 407 aa16.19■□□□□ 0.18
HACD3-208ENST00000566239 INHAP05111 366 aa16.19■□□□□ 0.18
HACD3-208ENST00000566239 ELNP15502 786 aa16.19■□□□□ 0.18
HACD3-208ENST00000566239 CAPN2P17655 700 aa16.19■□□□□ 0.18
HACD3-208ENST00000566239 HOXA7P31268 230 aaPredicted RBP16.19■□□□□ 0.18
HACD3-208ENST00000566239 JAG1P78504 1218 aa16.19■□□□□ 0.18
HACD3-208ENST00000566239 SLC9C2Q5TAH2 1124 aa16.19■□□□□ 0.18
HACD3-208ENST00000566239 TATDN1Q6P1N9 297 aa16.19■□□□□ 0.18
HACD3-208ENST00000566239 BCL11AQ9H165 835 aa16.19■□□□□ 0.18
HACD3-208ENST00000566239 UNC93B1Q9H1C4 597 aa16.19■□□□□ 0.18
HACD3-208ENST00000566239 GH2P01242 217 aa16.18■□□□□ 0.18
HACD3-208ENST00000566239 U2AF1L4Q8WU68 220 aaKnown RBP16.18■□□□□ 0.18
HACD3-208ENST00000566239 DNAJC2Q99543 621 aaKnown RBP16.18■□□□□ 0.18
HACD3-208ENST00000566239 FEZ1Q99689 392 aa16.18■□□□□ 0.18
HACD3-208ENST00000566239 CRNKL1Q9BZJ0 848 aaKnown RBP16.18■□□□□ 0.18
HACD3-208ENST00000566239 MORF4L1Q9UBU8 362 aa16.18■□□□□ 0.18
HACD3-208ENST00000566239 GOLIM4O00461 696 aa16.17■□□□□ 0.18
HACD3-208ENST00000566239 SGPL1O95470 568 aa16.17■□□□□ 0.18
HACD3-208ENST00000566239 POLR3DP05423 398 aaPredicted RBP16.17■□□□□ 0.18
HACD3-208ENST00000566239 PDE6AP16499 860 aa16.17■□□□□ 0.18
HACD3-208ENST00000566239 SHROOM1Q2M3G4 852 aaPredicted RBP16.17■□□□□ 0.18
HACD3-208ENST00000566239 CERKLQ49MI3 558 aaPredicted RBP16.17■□□□□ 0.18
HACD3-208ENST00000566239 USP17L2Q6R6M4 530 aa16.17■□□□□ 0.18
HACD3-208ENST00000566239 SIRT2Q8IXJ6 389 aa16.17■□□□□ 0.18
HACD3-208ENST00000566239 GTF3C2Q8WUA4 911 aaPredicted RBP16.17■□□□□ 0.18
HACD3-208ENST00000566239 RIOK1Q9BRS2 568 aaKnown RBP16.17■□□□□ 0.18
HACD3-208ENST00000566239 HTATIP2Q9BUP3 242 aa16.17■□□□□ 0.18
HACD3-208ENST00000566239 CABP5Q9NP86 173 aa16.17■□□□□ 0.18
HACD3-208ENST00000566239 MKI67P46013 3256 aaKnown RBP16.16■□□□□ 0.18
HACD3-208ENST00000566239 HERVK_113P62684 666 aa16.16■□□□□ 0.18
HACD3-208ENST00000566239 RAB3GAP1Q15042 981 aa16.16■□□□□ 0.18
HACD3-208ENST00000566239 ABCB5Q2M3G0 1257 aa16.16■□□□□ 0.18
HACD3-208ENST00000566239 HABP4Q5JVS0 413 aaKnown RBP16.16■□□□□ 0.18
HACD3-208ENST00000566239 GPRC5AQ8NFJ5 357 aa16.16■□□□□ 0.18
HACD3-208ENST00000566239 DPF3Q92784 378 aa16.16■□□□□ 0.18
HACD3-208ENST00000566239 P2RX7Q99572 595 aaKnown RBP16.16■□□□□ 0.18
HACD3-208ENST00000566239 ZNF532Q9HCE3 1301 aa16.16■□□□□ 0.18
HACD3-208ENST00000566239 FARP2O94887 1054 aaPredicted RBP16.15■□□□□ 0.18
HACD3-208ENST00000566239 TFRCP02786 760 aaKnown RBP16.15■□□□□ 0.18
HACD3-208ENST00000566239 HMGCRP04035 888 aa16.15■□□□□ 0.18
HACD3-208ENST00000566239 USP14P54578 494 aa16.15■□□□□ 0.18
HACD3-208ENST00000566239 PDE3AQ14432 1141 aa16.15■□□□□ 0.18
HACD3-208ENST00000566239 CCAR1Q8IX12 1150 aaKnown RBP16.15■□□□□ 0.18
HACD3-208ENST00000566239 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.15■□□□□ 0.18
HACD3-208ENST00000566239 EMILIN3Q9NT22 766 aa16.15■□□□□ 0.18
HACD3-208ENST00000566239 PAG1Q9NWQ8 432 aa16.15■□□□□ 0.18
HACD3-208ENST00000566239 MCM9Q9NXL9 1143 aa16.15■□□□□ 0.18
HACD3-208ENST00000566239 PCDH10Q9P2E7 1040 aa16.15■□□□□ 0.18
HACD3-208ENST00000566239 MAPK4P31152 587 aa16.14■□□□□ 0.17
HACD3-208ENST00000566239 PLCD1P51178 756 aa16.14■□□□□ 0.17
HACD3-208ENST00000566239 ZYXQ15942 572 aaKnown RBP16.14■□□□□ 0.17
HACD3-208ENST00000566239 C12orf42Q96LP6 360 aa16.14■□□□□ 0.17
HACD3-208ENST00000566239 DEFB118Q96PH6 123 aa16.14■□□□□ 0.17
HACD3-208ENST00000566239 PAK6Q9NQU5 681 aaPredicted RBP16.14■□□□□ 0.17
HACD3-208ENST00000566239 GJD2Q9UKL4 321 aa16.14■□□□□ 0.17
HACD3-208ENST00000566239 ALPK3Q96L96 1907 aa16.13■□□□□ 0.17
HACD3-208ENST00000566239 USP17L15C9J2P7 530 aa16.13■□□□□ 0.17
HACD3-208ENST00000566239 USP17L13C9JLJ4 530 aa16.13■□□□□ 0.17
HACD3-208ENST00000566239 USP17L11C9JVI0 530 aa16.13■□□□□ 0.17
HACD3-208ENST00000566239 USP17L18D6R9N7 530 aa16.13■□□□□ 0.17
HACD3-208ENST00000566239 USP17L22D6RA61 530 aa16.13■□□□□ 0.17
HACD3-208ENST00000566239 USP17L17D6RBQ6 530 aa16.13■□□□□ 0.17
HACD3-208ENST00000566239 USP17L19D6RCP7 530 aa16.13■□□□□ 0.17
HACD3-208ENST00000566239 USP17L20D6RJB6 530 aa16.13■□□□□ 0.17
HACD3-208ENST00000566239 H0YGN5 161 aa16.13■□□□□ 0.17
HACD3-208ENST00000566239 ATP5JP18859 108 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms