RNA–Protein interactions for RNA: ENST00000566095.6

SF3B3-207, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-207ENST00000566095 TFAP4Q01664 338 aa11.51□□□□□ -0.57
SF3B3-207ENST00000566095 NBPF9Q3BBW0 867 aa11.51□□□□□ -0.57
SF3B3-207ENST00000566095 IFIT1BQ5T764 474 aaKnown RBP11.51□□□□□ -0.57
SF3B3-207ENST00000566095 DGKHQ86XP1 1220 aa11.51□□□□□ -0.57
SF3B3-207ENST00000566095 ZNF274Q96GC6 653 aaPredicted RBP11.51□□□□□ -0.57
SF3B3-207ENST00000566095 ZSCAN10Q96SZ4 725 aaPredicted RBP11.51□□□□□ -0.57
SF3B3-207ENST00000566095 ANP32EQ9BTT0 268 aa11.51□□□□□ -0.57
SF3B3-207ENST00000566095 NBPF3Q9H094 633 aa11.51□□□□□ -0.57
SF3B3-207ENST00000566095 SLKQ9H2G2 1235 aaPredicted RBP11.51□□□□□ -0.57
SF3B3-207ENST00000566095 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.51□□□□□ -0.57
SF3B3-207ENST00000566095 ZSWIM5Q9P217 1185 aa11.51□□□□□ -0.57
SF3B3-207ENST00000566095 PLIN4Q96Q06 1357 aa11.51□□□□□ -0.57
SF3B3-207ENST00000566095 CDKL5O76039 1030 aa11.5□□□□□ -0.57
SF3B3-207ENST00000566095 CYP2D6P10635 497 aa11.5□□□□□ -0.57
SF3B3-207ENST00000566095 PDCP20941 246 aa11.5□□□□□ -0.57
SF3B3-207ENST00000566095 EPS15P42566 896 aa11.5□□□□□ -0.57
SF3B3-207ENST00000566095 PLCD1P51178 756 aa11.5□□□□□ -0.57
SF3B3-207ENST00000566095 CACNB3P54284 484 aa11.5□□□□□ -0.57
SF3B3-207ENST00000566095 GABPAQ06546 454 aa11.5□□□□□ -0.57
SF3B3-207ENST00000566095 RASA3Q14644 834 aa11.5□□□□□ -0.57
SF3B3-207ENST00000566095 RAB3GAP1Q15042 981 aa11.5□□□□□ -0.57
SF3B3-207ENST00000566095 CERKLQ49MI3 558 aaPredicted RBP11.5□□□□□ -0.57
SF3B3-207ENST00000566095 CATIPQ7Z7H3 387 aa11.5□□□□□ -0.57
SF3B3-207ENST00000566095 METTL16Q86W50 562 aaKnown RBP11.5□□□□□ -0.57
SF3B3-207ENST00000566095 NEDD1Q8NHV4 660 aa11.5□□□□□ -0.57
SF3B3-207ENST00000566095 BRF1Q92994 677 aa11.5□□□□□ -0.57
SF3B3-207ENST00000566095 DEFB129Q9H1M3 183 aa11.5□□□□□ -0.57
SF3B3-207ENST00000566095 SH2D4AQ9H788 454 aa11.5□□□□□ -0.57
SF3B3-207ENST00000566095 KAT14Q9H8E8 782 aa11.5□□□□□ -0.57
SF3B3-207ENST00000566095 GGA3Q9NZ52 723 aa11.5□□□□□ -0.57
SF3B3-207ENST00000566095 NAP1L2Q9ULW6 460 aaPredicted RBP11.5□□□□□ -0.57
SF3B3-207ENST00000566095 SYNPO2Q9UMS6 1093 aa11.5□□□□□ -0.57
SF3B3-207ENST00000566095 SLC12A7Q9Y666 1083 aa11.5□□□□□ -0.57
SF3B3-207ENST00000566095 ADAMTSL1Q8N6G6 1762 aa11.49□□□□□ -0.57
SF3B3-207ENST00000566095 CYP2D7A0A087X1C5 515 aa11.49□□□□□ -0.57
SF3B3-207ENST00000566095 MPHOSPH10O00566 681 aaKnown RBP11.49□□□□□ -0.57
SF3B3-207ENST00000566095 SH2B2O14492 632 aaPredicted RBP11.49□□□□□ -0.57
SF3B3-207ENST00000566095 CPLX1O14810 134 aa11.49□□□□□ -0.57
SF3B3-207ENST00000566095 DDAH1O94760 285 aa11.49□□□□□ -0.57
SF3B3-207ENST00000566095 VEGFAP15692 232 aaPredicted RBP11.49□□□□□ -0.57
SF3B3-207ENST00000566095 RASA1P20936 1047 aa11.49□□□□□ -0.57
SF3B3-207ENST00000566095 ANGEL2Q5VTE6 544 aaKnown RBP11.49□□□□□ -0.57
SF3B3-207ENST00000566095 TMEM179Q6ZVK1 233 aa11.49□□□□□ -0.57
SF3B3-207ENST00000566095 SGMS1Q86VZ5 419 aa11.49□□□□□ -0.57
SF3B3-207ENST00000566095 STK11IPQ8N1F8 1099 aa11.49□□□□□ -0.57
SF3B3-207ENST00000566095 GBP4Q96PP9 640 aa11.49□□□□□ -0.57
SF3B3-207ENST00000566095 ZNF341Q9BYN7 854 aa11.49□□□□□ -0.57
SF3B3-207ENST00000566095 PCDHAC2Q9Y5I4 1007 aa11.49□□□□□ -0.57
SF3B3-207ENST00000566095 TNKSO95271 1327 aa11.49□□□□□ -0.57
SF3B3-207ENST00000566095 WDR90Q96KV7 1748 aa11.49□□□□□ -0.57
SF3B3-207ENST00000566095 KLF18A0A0U1RQI7 1052 aa11.48□□□□□ -0.57
SF3B3-207ENST00000566095 DDTLA6NHG4 134 aaPredicted RBP11.48□□□□□ -0.57
SF3B3-207ENST00000566095 ZBTB43O43298 467 aa11.48□□□□□ -0.57
SF3B3-207ENST00000566095 PRDM1O75626 825 aa11.48□□□□□ -0.57
SF3B3-207ENST00000566095 KIF5BP33176 963 aa11.48□□□□□ -0.57
SF3B3-207ENST00000566095 GNAQP50148 359 aa11.48□□□□□ -0.57
SF3B3-207ENST00000566095 ABCB5Q2M3G0 1257 aa11.48□□□□□ -0.57
SF3B3-207ENST00000566095 SLC4A8Q2Y0W8 1093 aa11.48□□□□□ -0.57
SF3B3-207ENST00000566095 TATDN1Q6P1N9 297 aa11.48□□□□□ -0.57
SF3B3-207ENST00000566095 USP48Q86UV5 1035 aa11.48□□□□□ -0.57
SF3B3-207ENST00000566095 TRPM4Q8TD43 1214 aa11.48□□□□□ -0.57
SF3B3-207ENST00000566095 DYNLL2Q96FJ2 89 aa11.48□□□□□ -0.57
SF3B3-207ENST00000566095 TAF1DQ9H5J8 278 aaPredicted RBP11.48□□□□□ -0.57
SF3B3-207ENST00000566095 KANSL2Q9H9L4 492 aa11.48□□□□□ -0.57
SF3B3-207ENST00000566095 RBM28Q9NW13 759 aaKnown RBP11.48□□□□□ -0.57
SF3B3-207ENST00000566095 TAF6LQ9Y6J9 622 aa11.48□□□□□ -0.57
SF3B3-207ENST00000566095 CNTNAP1P78357 1384 aa11.48□□□□□ -0.57
SF3B3-207ENST00000566095 MYH8P13535 1937 aa11.47□□□□□ -0.57
SF3B3-207ENST00000566095 GOLGA8BA8MQT2 603 aa11.47□□□□□ -0.57
SF3B3-207ENST00000566095 PPP1R12BO60237 982 aaPredicted RBP11.47□□□□□ -0.57
SF3B3-207ENST00000566095 TTLL1O95922 423 aa11.47□□□□□ -0.57
SF3B3-207ENST00000566095 ASNSP08243 561 aa11.47□□□□□ -0.57
SF3B3-207ENST00000566095 TOP1P11387 765 aaKnown RBP11.47□□□□□ -0.57
SF3B3-207ENST00000566095 CPA1P15085 419 aa11.47□□□□□ -0.57
SF3B3-207ENST00000566095 SLC4A3P48751 1232 aa11.47□□□□□ -0.57
SF3B3-207ENST00000566095 METAP2P50579 478 aaKnown RBP eCLIP11.47□□□□□ -0.57
SF3B3-207ENST00000566095 HMGN5P82970 282 aaKnown RBP11.47□□□□□ -0.57
SF3B3-207ENST00000566095 TOB2Q14106 344 aaPredicted RBP11.47□□□□□ -0.57
SF3B3-207ENST00000566095 NOL8Q76FK4 1167 aaKnown RBP11.47□□□□□ -0.57
SF3B3-207ENST00000566095 CYB5R4Q7L1T6 521 aa11.47□□□□□ -0.57
SF3B3-207ENST00000566095 CDC37L1Q7L3B6 337 aa11.47□□□□□ -0.57
SF3B3-207ENST00000566095 KRT26Q7Z3Y9 468 aa11.47□□□□□ -0.57
SF3B3-207ENST00000566095 CTCFLQ8NI51 663 aaPredicted RBP11.47□□□□□ -0.57
SF3B3-207ENST00000566095 IGDCC4Q8TDY8 1250 aa11.47□□□□□ -0.57
SF3B3-207ENST00000566095 ANKS1AQ92625 1134 aa11.47□□□□□ -0.57
SF3B3-207ENST00000566095 MAP3K14Q99558 947 aa11.47□□□□□ -0.57
SF3B3-207ENST00000566095 TMEM39BQ9GZU3 492 aa11.47□□□□□ -0.57
SF3B3-207ENST00000566095 LY9Q9HBG7 655 aa11.47□□□□□ -0.57
SF3B3-207ENST00000566095 ARHGEF10LQ9HCE6 1279 aa11.47□□□□□ -0.57
SF3B3-207ENST00000566095 RBM27Q9P2N5 1060 aaKnown RBP11.47□□□□□ -0.57
SF3B3-207ENST00000566095 ATP6V1DQ9Y5K8 247 aa11.47□□□□□ -0.57
SF3B3-207ENST00000566095 NID2Q14112 1375 aa11.46□□□□□ -0.57
SF3B3-207ENST00000566095 WDR33Q9C0J8 1336 aaKnown RBP11.46□□□□□ -0.57
SF3B3-207ENST00000566095 SHTN1A0MZ66 631 aa11.46□□□□□ -0.57
SF3B3-207ENST00000566095 DDX11L8A8MPP1 907 aa11.46□□□□□ -0.57
SF3B3-207ENST00000566095 PFKFB2O60825 505 aa11.46□□□□□ -0.57
SF3B3-207ENST00000566095 SHMT1P34896 483 aa11.46□□□□□ -0.57
SF3B3-207ENST00000566095 ANTXR2P58335 489 aa11.46□□□□□ -0.57
SF3B3-207ENST00000566095 MAP3K10Q02779 954 aa11.46□□□□□ -0.57
SF3B3-207ENST00000566095 APOBRQ0VD83 1088 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms