RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 TTI1O43156 1089 aa5.62□□□□□ -1.51
SMG1-211ENST00000565324 RSAD2Q8WXG1 361 aa5.62□□□□□ -1.51
SMG1-211ENST00000565324 BRF1Q92994 677 aa5.62□□□□□ -1.51
SMG1-211ENST00000565324 TRIM6Q9C030 488 aaPredicted RBP5.62□□□□□ -1.51
SMG1-211ENST00000565324 CCDC8Q9H0W5 538 aaPredicted RBP5.62□□□□□ -1.51
SMG1-211ENST00000565324 A0A1B0GW55 424 aa5.62□□□□□ -1.51
SMG1-211ENST00000565324 DUX4L2P0CJ85 424 aa5.62□□□□□ -1.51
SMG1-211ENST00000565324 DUX4L3P0CJ86 424 aa5.62□□□□□ -1.51
SMG1-211ENST00000565324 DUX4L4P0CJ87 422 aa5.62□□□□□ -1.51
SMG1-211ENST00000565324 DUX4L5P0CJ88 424 aa5.62□□□□□ -1.51
SMG1-211ENST00000565324 DUX4L6P0CJ89 424 aa5.62□□□□□ -1.51
SMG1-211ENST00000565324 DUX4L7P0CJ90 424 aa5.62□□□□□ -1.51
SMG1-211ENST00000565324 P4HA1P13674 534 aa5.62□□□□□ -1.51
SMG1-211ENST00000565324 IL9RQ01113 521 aa5.62□□□□□ -1.51
SMG1-211ENST00000565324 NMIQ13287 307 aaPredicted RBP5.62□□□□□ -1.51
SMG1-211ENST00000565324 CCDC13Q8IYE1 715 aa5.62□□□□□ -1.51
SMG1-211ENST00000565324 MYD88Q99836 296 aa5.62□□□□□ -1.51
SMG1-211ENST00000565324 DUX4Q9UBX2 424 aa5.62□□□□□ -1.51
SMG1-211ENST00000565324 TEKT2Q9UIF3 430 aa5.62□□□□□ -1.51
SMG1-211ENST00000565324 A0A087WUV0 522 aaPredicted RBP5.61□□□□□ -1.51
SMG1-211ENST00000565324 DCAF17Q5H9S7 520 aaPredicted RBP5.61□□□□□ -1.51
SMG1-211ENST00000565324 HAUS3Q68CZ6 603 aa5.61□□□□□ -1.51
SMG1-211ENST00000565324 PPWD1Q96BP3 646 aaKnown RBP5.61□□□□□ -1.51
SMG1-211ENST00000565324 MAP3K1Q13233 1512 aa5.61□□□□□ -1.51
SMG1-211ENST00000565324 ZNF500O60304 480 aaPredicted RBP5.61□□□□□ -1.51
SMG1-211ENST00000565324 PAXIP1Q6ZW49 1069 aaPredicted RBP5.61□□□□□ -1.51
SMG1-211ENST00000565324 RABGGTAQ92696 567 aa5.61□□□□□ -1.51
SMG1-211ENST00000565324 LRGUKQ96M69 825 aa5.61□□□□□ -1.51
SMG1-211ENST00000565324 GDAP1L1Q96MZ0 367 aa5.61□□□□□ -1.51
SMG1-211ENST00000565324 CARD10Q9BWT7 1032 aa5.61□□□□□ -1.51
SMG1-211ENST00000565324 SOS1Q07889 1333 aaPredicted RBP5.61□□□□□ -1.51
SMG1-211ENST00000565324 PPP2R5BQ15173 497 aa5.61□□□□□ -1.51
SMG1-211ENST00000565324 LDHAL6AQ6ZMR3 332 aa5.61□□□□□ -1.51
SMG1-211ENST00000565324 UBE3BQ7Z3V4 1068 aa5.61□□□□□ -1.51
SMG1-211ENST00000565324 CCHCR1Q8TD31 782 aa5.61□□□□□ -1.51
SMG1-211ENST00000565324 TRIM15Q9C019 465 aa5.61□□□□□ -1.51
SMG1-211ENST00000565324 TRAF5O00463 557 aa5.61□□□□□ -1.51
SMG1-211ENST00000565324 CREB3O43889 395 aa5.61□□□□□ -1.51
SMG1-211ENST00000565324 TCP1P17987 556 aaKnown RBP5.61□□□□□ -1.51
SMG1-211ENST00000565324 Q6ZUG5 572 aa5.61□□□□□ -1.51
SMG1-211ENST00000565324 CABP1Q9NZU7 370 aa5.61□□□□□ -1.51
SMG1-211ENST00000565324 BZW2Q9Y6E2 419 aaKnown RBP5.61□□□□□ -1.51
SMG1-211ENST00000565324 CACNA1FO60840 1977 aa5.61□□□□□ -1.51
SMG1-211ENST00000565324 NOP14P78316 857 aaKnown RBP5.61□□□□□ -1.51
SMG1-211ENST00000565324 HSP90AA4PQ58FG1 418 aa5.61□□□□□ -1.51
SMG1-211ENST00000565324 ANKRD44Q8N8A2 993 aa5.61□□□□□ -1.51
SMG1-211ENST00000565324 DCTN3O75935 186 aa5.61□□□□□ -1.51
SMG1-211ENST00000565324 PSMD7P51665 324 aa5.61□□□□□ -1.51
SMG1-211ENST00000565324 SFMBT2Q5VUG0 894 aa5.61□□□□□ -1.51
SMG1-211ENST00000565324 NXNQ6DKJ4 435 aa5.61□□□□□ -1.51
SMG1-211ENST00000565324 TTC19Q6DKK2 380 aaPredicted RBP5.61□□□□□ -1.51
SMG1-211ENST00000565324 JADE1Q6IE81 842 aa5.61□□□□□ -1.51
SMG1-211ENST00000565324 CCDC197Q8NCU1 140 aa5.61□□□□□ -1.51
SMG1-211ENST00000565324 IWS1Q96ST2 819 aa5.61□□□□□ -1.51
SMG1-211ENST00000565324 LZTS2Q9BRK4 669 aa5.61□□□□□ -1.51
SMG1-211ENST00000565324 WWC3Q9ULE0 1092 aa5.61□□□□□ -1.51
SMG1-211ENST00000565324 SDSP20132 328 aa5.61□□□□□ -1.51
SMG1-211ENST00000565324 FANCCQ00597 558 aa5.61□□□□□ -1.51
SMG1-211ENST00000565324 GABPAQ06546 454 aa5.61□□□□□ -1.51
SMG1-211ENST00000565324 MAP7D3Q8IWC1 876 aa5.61□□□□□ -1.51
SMG1-211ENST00000565324 TMCO5AQ8N6Q1 288 aa5.61□□□□□ -1.51
SMG1-211ENST00000565324 CDKL2Q92772 493 aa5.61□□□□□ -1.51
SMG1-211ENST00000565324 CEP19Q96LK0 163 aa5.61□□□□□ -1.51
SMG1-211ENST00000565324 TPCN1Q9ULQ1 816 aa5.61□□□□□ -1.51
SMG1-211ENST00000565324 PASKQ96RG2 1323 aa5.61□□□□□ -1.51
SMG1-211ENST00000565324 GFAPP14136 432 aa5.61□□□□□ -1.51
SMG1-211ENST00000565324 MMEL1Q495T6 779 aa5.61□□□□□ -1.51
SMG1-211ENST00000565324 ZNF804AQ7Z570 1209 aa5.61□□□□□ -1.51
SMG1-211ENST00000565324 N4BP2L2Q92802 583 aaPredicted RBP5.61□□□□□ -1.51
SMG1-211ENST00000565324 SH3GL3Q99963 347 aa5.61□□□□□ -1.51
SMG1-211ENST00000565324 VPS37BQ9H9H4 285 aa5.61□□□□□ -1.51
SMG1-211ENST00000565324 MAD1L1Q9Y6D9 718 aa5.61□□□□□ -1.51
SMG1-211ENST00000565324 ANKRD36BQ8N2N9 1353 aa5.61□□□□□ -1.51
SMG1-211ENST00000565324 A0A1B0GVL5 298 aa5.61□□□□□ -1.51
SMG1-211ENST00000565324 OCA2Q04671 838 aa5.61□□□□□ -1.51
SMG1-211ENST00000565324 TMED1Q13445 227 aa5.61□□□□□ -1.51
SMG1-211ENST00000565324 SCYL3Q8IZE3 742 aa5.61□□□□□ -1.51
SMG1-211ENST00000565324 CNPY4Q8N129 248 aa5.61□□□□□ -1.51
SMG1-211ENST00000565324 CFAP61Q8NHU2 1237 aa5.61□□□□□ -1.51
SMG1-211ENST00000565324 RNF34Q969K3 372 aa5.61□□□□□ -1.51
SMG1-211ENST00000565324 CCDC138Q96M89 665 aa5.61□□□□□ -1.51
SMG1-211ENST00000565324 PAG1Q9NWQ8 432 aa5.61□□□□□ -1.51
SMG1-211ENST00000565324 NUB1Q9Y5A7 615 aa5.61□□□□□ -1.51
SMG1-211ENST00000565324 TNFAIP3P21580 790 aa5.6□□□□□ -1.51
SMG1-211ENST00000565324 SESN3P58005 492 aa5.6□□□□□ -1.51
SMG1-211ENST00000565324 CASC4Q6P4E1 433 aa5.6□□□□□ -1.51
SMG1-211ENST00000565324 PDZD4Q76G19 769 aaPredicted RBP5.6□□□□□ -1.51
SMG1-211ENST00000565324 TRIM56Q9BRZ2 755 aaKnown RBP5.6□□□□□ -1.51
SMG1-211ENST00000565324 POLR3CQ9BUI4 534 aaPredicted RBP5.6□□□□□ -1.51
SMG1-211ENST00000565324 VAT1LQ9HCJ6 419 aa5.6□□□□□ -1.51
SMG1-211ENST00000565324 CCDC61Q9Y6R9 512 aa5.6□□□□□ -1.51
SMG1-211ENST00000565324 ATP5HO75947 161 aa5.6□□□□□ -1.51
SMG1-211ENST00000565324 BRD2P25440 801 aaKnown RBP5.6□□□□□ -1.51
SMG1-211ENST00000565324 NLRP12P59046 1061 aa5.6□□□□□ -1.51
SMG1-211ENST00000565324 GNGT1P63211 74 aa5.6□□□□□ -1.51
SMG1-211ENST00000565324 RAD51AP2Q09MP3 1159 aa5.6□□□□□ -1.51
SMG1-211ENST00000565324 SND1Q7KZF4 910 aaKnown RBP eCLIP5.6□□□□□ -1.51
SMG1-211ENST00000565324 OGFOD1Q8N543 542 aa5.6□□□□□ -1.51
SMG1-211ENST00000565324 NCOA1Q15788 1441 aa5.6□□□□□ -1.51
SMG1-211ENST00000565324 VGLL3A8MV65 326 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms