RNA–Protein interactions for RNA: ENST00000565298.5

IFT140-206, Transcript of intraflagellar transport 140, humanhuman

TSL 2

Gene IFT140, Length 4,727 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-206ENST00000565298 DALRD3Q5D0E6 543 aaKnown RBP21.45■■□□□ 1.02
IFT140-206ENST00000565298 CCDC113Q9H0I3 377 aa21.45■■□□□ 1.02
IFT140-206ENST00000565298 SEC31BQ9NQW1 1179 aa21.45■■□□□ 1.02
IFT140-206ENST00000565298 DBNLQ9UJU6 430 aaKnown RBP21.45■■□□□ 1.02
IFT140-206ENST00000565298 IQGAP3Q86VI3 1631 aa21.45■■□□□ 1.02
IFT140-206ENST00000565298 TNKSO95271 1327 aa21.45■■□□□ 1.02
IFT140-206ENST00000565298 UBXN1Q04323 297 aa21.45■■□□□ 1.02
IFT140-206ENST00000565298 CETN3O15182 167 aa21.45■■□□□ 1.02
IFT140-206ENST00000565298 KIF5AQ12840 1032 aa21.45■■□□□ 1.02
IFT140-206ENST00000565298 WDR44Q5JSH3 913 aa21.45■■□□□ 1.02
IFT140-206ENST00000565298 PAGR1Q9BTK6 254 aa21.45■■□□□ 1.02
IFT140-206ENST00000565298 GINS2Q9Y248 185 aa21.45■■□□□ 1.02
IFT140-206ENST00000565298 SMCO2A6NFE2 343 aa21.44■■□□□ 1.02
IFT140-206ENST00000565298 FGAP02671 866 aa21.44■■□□□ 1.02
IFT140-206ENST00000565298 GRAPQ13588 217 aa21.44■■□□□ 1.02
IFT140-206ENST00000565298 GRAPLQ8TC17 118 aaPredicted RBP21.44■■□□□ 1.02
IFT140-206ENST00000565298 SELENOOQ9BVL4 669 aa21.44■■□□□ 1.02
IFT140-206ENST00000565298 LUC7L2Q9Y383 392 aaKnown RBP21.44■■□□□ 1.02
IFT140-206ENST00000565298 ABCB5Q2M3G0 1257 aa21.44■■□□□ 1.02
IFT140-206ENST00000565298 SWAP70Q9UH65 585 aa21.44■■□□□ 1.02
IFT140-206ENST00000565298 PRAMEF22A3QJZ6 481 aa21.44■■□□□ 1.02
IFT140-206ENST00000565298 HARSP12081 509 aaKnown RBP21.44■■□□□ 1.02
IFT140-206ENST00000565298 CEP135Q66GS9 1140 aa21.44■■□□□ 1.02
IFT140-206ENST00000565298 FANCBQ8NB91 859 aa21.44■■□□□ 1.02
IFT140-206ENST00000565298 STAP2Q9UGK3 403 aa21.44■■□□□ 1.02
IFT140-206ENST00000565298 SRP68Q9UHB9 627 aaKnown RBP21.44■■□□□ 1.02
IFT140-206ENST00000565298 CCDC66A2RUB6 948 aa21.43■■□□□ 1.02
IFT140-206ENST00000565298 SKILP12757 684 aa21.43■■□□□ 1.02
IFT140-206ENST00000565298 ARID5AQ03989 594 aa21.43■■□□□ 1.02
IFT140-206ENST00000565298 CKAP4Q07065 602 aaKnown RBP21.43■■□□□ 1.02
IFT140-206ENST00000565298 MCF2L2Q86YR7 1114 aa21.43■■□□□ 1.02
IFT140-206ENST00000565298 ATF5Q9Y2D1 282 aaPredicted RBP21.43■■□□□ 1.02
IFT140-206ENST00000565298 KRT86O43790 486 aa21.43■■□□□ 1.02
IFT140-206ENST00000565298 PPM1FP49593 454 aaPredicted RBP21.43■■□□□ 1.02
IFT140-206ENST00000565298 SLC8A3P57103 927 aa21.43■■□□□ 1.02
IFT140-206ENST00000565298 DCAF17Q5H9S7 520 aaPredicted RBP21.43■■□□□ 1.02
IFT140-206ENST00000565298 SLFN13Q68D06 897 aa21.43■■□□□ 1.02
IFT140-206ENST00000565298 NARFQ9UHQ1 456 aa21.43■■□□□ 1.02
IFT140-206ENST00000565298 CDC42BPAQ5VT25 1732 aa21.43■■□□□ 1.02
IFT140-206ENST00000565298 KLRF2D3W0D1 207 aa21.43■■□□□ 1.02
IFT140-206ENST00000565298 ALAS1P13196 640 aa21.43■■□□□ 1.02
IFT140-206ENST00000565298 ARHGEF6Q15052 776 aa21.43■■□□□ 1.02
IFT140-206ENST00000565298 MASTLQ96GX5 879 aa21.43■■□□□ 1.02
IFT140-206ENST00000565298 NT5C3AQ9H0P0 336 aa21.43■■□□□ 1.02
IFT140-206ENST00000565298 OVOS2A0A0G2JMS6 1433 aa21.43■■□□□ 1.02
IFT140-206ENST00000565298 OVOS2A0A0J9YW53 1432 aa21.43■■□□□ 1.02
IFT140-206ENST00000565298 OVOS2Q6IE36 1432 aa21.43■■□□□ 1.02
IFT140-206ENST00000565298 M0QZ92 97 aa21.42■■□□□ 1.02
IFT140-206ENST00000565298 DPH6Q7L8W6 267 aa21.42■■□□□ 1.02
IFT140-206ENST00000565298 TRIM6Q9C030 488 aaPredicted RBP21.42■■□□□ 1.02
IFT140-206ENST00000565298 ADORA1P30542 326 aa21.42■■□□□ 1.02
IFT140-206ENST00000565298 HERC4Q5GLZ8 1057 aaPredicted RBP21.42■■□□□ 1.02
IFT140-206ENST00000565298 TRMT2AQ8IZ69 625 aaKnown RBP21.42■■□□□ 1.02
IFT140-206ENST00000565298 VPS54Q9P1Q0 977 aa21.42■■□□□ 1.02
IFT140-206ENST00000565298 PTGS1P23219 599 aa21.42■■□□□ 1.02
IFT140-206ENST00000565298 LMAN1P49257 510 aa21.42■■□□□ 1.02
IFT140-206ENST00000565298 CERKQ8TCT0 537 aa21.42■■□□□ 1.02
IFT140-206ENST00000565298 CSRNP1Q96S65 589 aa21.42■■□□□ 1.02
IFT140-206ENST00000565298 COMMD10Q9Y6G5 202 aa21.42■■□□□ 1.02
IFT140-206ENST00000565298 GALNT17Q6IS24 598 aa21.41■■□□□ 1.02
IFT140-206ENST00000565298 CCDC186Q7Z3E2 898 aa21.41■■□□□ 1.02
IFT140-206ENST00000565298 FBXO11Q86XK2 927 aa21.41■■□□□ 1.02
IFT140-206ENST00000565298 GJD4Q96KN9 370 aaPredicted RBP21.41■■□□□ 1.02
IFT140-206ENST00000565298 DBNDD1Q9H9R9 158 aa21.41■■□□□ 1.02
IFT140-206ENST00000565298 GAS7O60861 476 aa21.41■■□□□ 1.02
IFT140-206ENST00000565298 CCDC175P0C221 793 aa21.41■■□□□ 1.02
IFT140-206ENST00000565298 GPATCH4Q5T3I0 446 aaKnown RBP21.41■■□□□ 1.02
IFT140-206ENST00000565298 GLG1Q92896 1179 aa21.41■■□□□ 1.02
IFT140-206ENST00000565298 SEC62Q99442 399 aaKnown RBP21.41■■□□□ 1.02
IFT140-206ENST00000565298 PSTPIP2Q9H939 334 aa21.41■■□□□ 1.02
IFT140-206ENST00000565298 FSD2A1L4K1 749 aa21.41■■□□□ 1.02
IFT140-206ENST00000565298 DDX39AO00148 427 aaKnown RBP21.41■■□□□ 1.02
IFT140-206ENST00000565298 DDAH1O94760 285 aa21.41■■□□□ 1.02
IFT140-206ENST00000565298 KCNJ14Q9UNX9 436 aa21.41■■□□□ 1.02
IFT140-206ENST00000565298 SLC27A3Q5K4L6 730 aa21.4■■□□□ 1.02
IFT140-206ENST00000565298 DHX36Q9H2U1 1008 aaKnown RBP21.4■■□□□ 1.02
IFT140-206ENST00000565298 FLOT1O75955 427 aa21.4■■□□□ 1.02
IFT140-206ENST00000565298 TUBB4AP04350 444 aa21.4■■□□□ 1.02
IFT140-206ENST00000565298 GADL1Q6ZQY3 521 aa21.4■■□□□ 1.02
IFT140-206ENST00000565298 GTF3C6Q969F1 213 aa21.4■■□□□ 1.02
IFT140-206ENST00000565298 AXIN2Q9Y2T1 843 aa21.4■■□□□ 1.02
IFT140-206ENST00000565298 POLR2DO15514 142 aaKnown RBP21.4■■□□□ 1.02
IFT140-206ENST00000565298 CALUO43852 315 aaPredicted RBP21.4■■□□□ 1.02
IFT140-206ENST00000565298 ZNF354CQ86Y25 554 aa21.4■■□□□ 1.02
IFT140-206ENST00000565298 ANKRD35Q8N283 1001 aa21.4■■□□□ 1.02
IFT140-206ENST00000565298 POLR2MP0CAP2 368 aa21.4■■□□□ 1.02
IFT140-206ENST00000565298 CCNA1P78396 465 aa21.4■■□□□ 1.02
IFT140-206ENST00000565298 ZMYM1Q5SVZ6 1142 aa21.4■■□□□ 1.02
IFT140-206ENST00000565298 OTUD6AQ7L8S5 288 aa21.4■■□□□ 1.02
IFT140-206ENST00000565298 COA1Q9GZY4 146 aa21.4■■□□□ 1.02
IFT140-206ENST00000565298 RBM10P98175 930 aaKnown RBP21.39■■□□□ 1.02
IFT140-206ENST00000565298 CNGA4Q8IV77 575 aa21.39■■□□□ 1.02
IFT140-206ENST00000565298 BSDC1Q9NW68 430 aaPredicted RBP21.39■■□□□ 1.02
IFT140-206ENST00000565298 ADGRB3O60242 1522 aa21.39■■□□□ 1.02
IFT140-206ENST00000565298 TRPC3Q13507 836 aa21.39■■□□□ 1.01
IFT140-206ENST00000565298 SUSD4Q5VX71 490 aa21.39■■□□□ 1.01
IFT140-206ENST00000565298 LRRC47Q8N1G4 583 aaKnown RBP21.39■■□□□ 1.01
IFT140-206ENST00000565298 FNBP4Q8N3X1 1017 aaPredicted RBP21.39■■□□□ 1.01
IFT140-206ENST00000565298 PABPN1LA6NDY0 278 aaKnown RBP21.39■■□□□ 1.01
IFT140-206ENST00000565298 EEF2P13639 858 aaKnown RBP21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms