RNA–Protein interactions for RNA: ENST00000565167.1

RPAP1-208, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 1,712 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-208ENST00000565167 METAP2P50579 478 aaKnown RBP eCLIP16.71■□□□□ 0.27
RPAP1-208ENST00000565167 ZNF280AP59817 542 aaPredicted RBP16.71■□□□□ 0.27
RPAP1-208ENST00000565167 NFKBIBQ15653 356 aa16.71■□□□□ 0.27
RPAP1-208ENST00000565167 CCDC178Q5BJE1 867 aa16.71■□□□□ 0.27
RPAP1-208ENST00000565167 IFIT1BQ5T764 474 aaKnown RBP16.71■□□□□ 0.27
RPAP1-208ENST00000565167 LARP1BQ659C4 914 aaKnown RBP16.71■□□□□ 0.27
RPAP1-208ENST00000565167 IL17RBQ9NRM6 502 aa16.71■□□□□ 0.27
RPAP1-208ENST00000565167 TMOD2Q9NZR1 351 aa16.71■□□□□ 0.27
RPAP1-208ENST00000565167 DDTLA6NHG4 134 aaPredicted RBP16.7■□□□□ 0.26
RPAP1-208ENST00000565167 STX6O43752 255 aa16.7■□□□□ 0.26
RPAP1-208ENST00000565167 TSPY3P0CV98 308 aa16.7■□□□□ 0.26
RPAP1-208ENST00000565167 TSPY8P0CW00 308 aa16.7■□□□□ 0.26
RPAP1-208ENST00000565167 PDIA4P13667 645 aaKnown RBP16.7■□□□□ 0.26
RPAP1-208ENST00000565167 PDCP20941 246 aa16.7■□□□□ 0.26
RPAP1-208ENST00000565167 ADD1P35611 737 aaKnown RBP16.7■□□□□ 0.26
RPAP1-208ENST00000565167 RCAN1P53805 252 aa16.7■□□□□ 0.26
RPAP1-208ENST00000565167 HMGN5P82970 282 aaKnown RBP16.7■□□□□ 0.26
RPAP1-208ENST00000565167 RCSD1Q6JBY9 416 aa16.7■□□□□ 0.26
RPAP1-208ENST00000565167 SH3BP5LQ7L8J4 393 aa16.7■□□□□ 0.26
RPAP1-208ENST00000565167 MICU3Q86XE3 530 aa16.7■□□□□ 0.26
RPAP1-208ENST00000565167 ZNF654Q8IZM8 581 aa16.7■□□□□ 0.26
RPAP1-208ENST00000565167 ANKS1AQ92625 1134 aa16.7■□□□□ 0.26
RPAP1-208ENST00000565167 DDX11Q96FC9 970 aa16.7■□□□□ 0.26
RPAP1-208ENST00000565167 MYL10Q9BUA6 226 aa16.7■□□□□ 0.26
RPAP1-208ENST00000565167 EHD4Q9H223 541 aa16.7■□□□□ 0.26
RPAP1-208ENST00000565167 MYOZ2Q9NPC6 264 aa16.7■□□□□ 0.26
RPAP1-208ENST00000565167 PI4KBQ9UBF8 816 aa16.7■□□□□ 0.26
RPAP1-208ENST00000565167 SWAP70Q9UH65 585 aa16.7■□□□□ 0.26
RPAP1-208ENST00000565167 GJA3Q9Y6H8 435 aa16.7■□□□□ 0.26
RPAP1-208ENST00000565167 WDR33Q9C0J8 1336 aaKnown RBP16.7■□□□□ 0.26
RPAP1-208ENST00000565167 PTPDC1A2A3K4 754 aa16.7■□□□□ 0.26
RPAP1-208ENST00000565167 RXRAP19793 462 aa16.7■□□□□ 0.26
RPAP1-208ENST00000565167 CDC27P30260 824 aa16.7■□□□□ 0.26
RPAP1-208ENST00000565167 GMPSP49915 693 aaPredicted RBP16.7■□□□□ 0.26
RPAP1-208ENST00000565167 SPDYE2Q495Y8 402 aa16.7■□□□□ 0.26
RPAP1-208ENST00000565167 DGKHQ86XP1 1220 aa16.7■□□□□ 0.26
RPAP1-208ENST00000565167 FOXP4Q8IVH2 680 aaPredicted RBP16.7■□□□□ 0.26
RPAP1-208ENST00000565167 NEDD1Q8NHV4 660 aa16.7■□□□□ 0.26
RPAP1-208ENST00000565167 FAM217BQ9NTX9 383 aaPredicted RBP16.7■□□□□ 0.26
RPAP1-208ENST00000565167 SHTN1A0MZ66 631 aa16.69■□□□□ 0.26
RPAP1-208ENST00000565167 CLRN2A0PK11 232 aa16.69■□□□□ 0.26
RPAP1-208ENST00000565167 GOLGA8AA7E2F4 631 aa16.69■□□□□ 0.26
RPAP1-208ENST00000565167 CPLX1O14810 134 aa16.69■□□□□ 0.26
RPAP1-208ENST00000565167 YBX3P16989 372 aaKnown RBP eCLIP16.69■□□□□ 0.26
RPAP1-208ENST00000565167 FKBP1CQ5VVH2 108 aa16.69■□□□□ 0.26
RPAP1-208ENST00000565167 CLEC17AQ6ZS10 378 aa16.69■□□□□ 0.26
RPAP1-208ENST00000565167 ZSCAN29Q8IWY8 852 aaPredicted RBP16.69■□□□□ 0.26
RPAP1-208ENST00000565167 TAOK2Q9UL54 1235 aa16.69■□□□□ 0.26
RPAP1-208ENST00000565167 TCP10L2B9ZVM9 353 aa16.68■□□□□ 0.26
RPAP1-208ENST00000565167 WNT10BO00744 389 aa16.68■□□□□ 0.26
RPAP1-208ENST00000565167 FDPSP14324 419 aaKnown RBP16.68■□□□□ 0.26
RPAP1-208ENST00000565167 CATIPQ7Z7H3 387 aa16.68■□□□□ 0.26
RPAP1-208ENST00000565167 CCDC144CPQ8IYA2 1237 aa16.68■□□□□ 0.26
RPAP1-208ENST00000565167 FAM184AQ8NB25 1140 aa16.68■□□□□ 0.26
RPAP1-208ENST00000565167 FANCBQ8NB91 859 aa16.68■□□□□ 0.26
RPAP1-208ENST00000565167 CNOT7Q9UIV1 285 aaKnown RBP16.68■□□□□ 0.26
RPAP1-208ENST00000565167 NID2Q14112 1375 aa16.68■□□□□ 0.26
RPAP1-208ENST00000565167 MYH8P13535 1937 aa16.68■□□□□ 0.26
RPAP1-208ENST00000565167 ZNF541Q9H0D2 1346 aa16.68■□□□□ 0.26
RPAP1-208ENST00000565167 ATRNL1Q5VV63 1379 aa16.68■□□□□ 0.26
RPAP1-208ENST00000565167 MYO1BO43795 1136 aa16.67■□□□□ 0.26
RPAP1-208ENST00000565167 ZSCAN22P10073 491 aaPredicted RBP16.67■□□□□ 0.26
RPAP1-208ENST00000565167 SHMT1P34896 483 aa16.67■□□□□ 0.26
RPAP1-208ENST00000565167 TROAPQ12815 778 aa16.67■□□□□ 0.26
RPAP1-208ENST00000565167 PPP2R5BQ15173 497 aa16.67■□□□□ 0.26
RPAP1-208ENST00000565167 NTRK3Q16288 839 aa16.67■□□□□ 0.26
RPAP1-208ENST00000565167 NBPF9Q3BBW0 867 aa16.67■□□□□ 0.26
RPAP1-208ENST00000565167 FOXD4L5Q5VV16 416 aaPredicted RBP16.67■□□□□ 0.26
RPAP1-208ENST00000565167 CPLX2Q6PUV4 134 aaKnown RBP16.67■□□□□ 0.26
RPAP1-208ENST00000565167 NUP133Q8WUM0 1156 aa16.67■□□□□ 0.26
RPAP1-208ENST00000565167 FAM151AQ8WW52 585 aa16.67■□□□□ 0.26
RPAP1-208ENST00000565167 FOXD4L4Q8WXT5 416 aaPredicted RBP16.67■□□□□ 0.26
RPAP1-208ENST00000565167 KIF3AQ9Y496 699 aa16.67■□□□□ 0.26
RPAP1-208ENST00000565167 COL2A1P02458 1487 aaPredicted RBP16.67■□□□□ 0.26
RPAP1-208ENST00000565167 UTRNP46939 3433 aa16.67■□□□□ 0.26
RPAP1-208ENST00000565167 CALM1P0DP23 149 aa16.67■□□□□ 0.26
RPAP1-208ENST00000565167 CALM2P0DP24 149 aa16.67■□□□□ 0.26
RPAP1-208ENST00000565167 CALM3P0DP25 149 aa16.67■□□□□ 0.26
RPAP1-208ENST00000565167 METTL16Q86W50 562 aaKnown RBP16.67■□□□□ 0.26
RPAP1-208ENST00000565167 MICALL2Q8IY33 904 aa16.67■□□□□ 0.26
RPAP1-208ENST00000565167 CRACR2BQ8N4Y2 399 aaPredicted RBP16.67■□□□□ 0.26
RPAP1-208ENST00000565167 MTMR6Q9Y217 621 aa16.67■□□□□ 0.26
RPAP1-208ENST00000565167 SIPA1L1O43166 1804 aa16.66■□□□□ 0.26
RPAP1-208ENST00000565167 CCDC196A0A1B0GTZ2 297 aa16.66■□□□□ 0.26
RPAP1-208ENST00000565167 PPFIA3O75145 1194 aa16.66■□□□□ 0.26
RPAP1-208ENST00000565167 CDKL5O76039 1030 aa16.66■□□□□ 0.26
RPAP1-208ENST00000565167 DDAH1O94760 285 aa16.66■□□□□ 0.26
RPAP1-208ENST00000565167 RTN1Q16799 776 aa16.66■□□□□ 0.26
RPAP1-208ENST00000565167 RBM26Q5T8P6 1007 aaKnown RBP16.66■□□□□ 0.26
RPAP1-208ENST00000565167 GBP4Q96PP9 640 aa16.66■□□□□ 0.26
RPAP1-208ENST00000565167 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.66■□□□□ 0.26
RPAP1-208ENST00000565167 CNTNAP1P78357 1384 aa16.65■□□□□ 0.26
RPAP1-208ENST00000565167 SLURP2P0DP57 97 aa16.65■□□□□ 0.26
RPAP1-208ENST00000565167 MCM4P33991 863 aa16.65■□□□□ 0.26
RPAP1-208ENST00000565167 FAM83AQ86UY5 434 aa16.65■□□□□ 0.26
RPAP1-208ENST00000565167 GPC2Q8N158 579 aa16.65■□□□□ 0.26
RPAP1-208ENST00000565167 CCDC17Q96LX7 622 aa16.65■□□□□ 0.26
RPAP1-208ENST00000565167 DNAJC18Q9H819 358 aa16.65■□□□□ 0.26
RPAP1-208ENST00000565167 KAT14Q9H8E8 782 aa16.65■□□□□ 0.26
RPAP1-208ENST00000565167 VEZTQ9HBM0 779 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms