RNA–Protein interactions for RNA: ENST00000564834.1

LINC01003-201, Transcript of long intergenic non-protein coding RNA 1003, humanhuman

BASIC

Gene LINC01003, Length 1,764 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01003-201ENST00000564834 OTUD7BQ6GQQ9 843 aa29.33■■■□□ 2.29
LINC01003-201ENST00000564834 TRIM22Q8IYM9 498 aa29.33■■■□□ 2.29
LINC01003-201ENST00000564834 TEKT1Q969V4 418 aa29.33■■■□□ 2.29
LINC01003-201ENST00000564834 PSME4Q14997 1843 aa29.32■■■□□ 2.28
LINC01003-201ENST00000564834 C21orf2O43822 256 aa29.32■■■□□ 2.28
LINC01003-201ENST00000564834 TROAPQ12815 778 aa29.32■■■□□ 2.28
LINC01003-201ENST00000564834 AOC3Q16853 763 aa29.32■■■□□ 2.28
LINC01003-201ENST00000564834 RBM28Q9NW13 759 aaKnown RBP29.32■■■□□ 2.28
LINC01003-201ENST00000564834 NMT2O60551 498 aa29.31■■■□□ 2.28
LINC01003-201ENST00000564834 TFAP4Q01664 338 aa29.31■■■□□ 2.28
LINC01003-201ENST00000564834 CCDC178Q5BJE1 867 aa29.31■■■□□ 2.28
LINC01003-201ENST00000564834 DACT2Q5SW24 774 aa29.31■■■□□ 2.28
LINC01003-201ENST00000564834 C16orf86Q6ZW13 317 aa29.31■■■□□ 2.28
LINC01003-201ENST00000564834 BRAPQ7Z569 592 aa29.31■■■□□ 2.28
LINC01003-201ENST00000564834 NBPF11Q86T75 865 aa29.31■■■□□ 2.28
LINC01003-201ENST00000564834 ZNF396Q96N95 335 aaPredicted RBP29.31■■■□□ 2.28
LINC01003-201ENST00000564834 KCNQ5Q9NR82 932 aa29.31■■■□□ 2.28
LINC01003-201ENST00000564834 CRACR2BQ8N4Y2 399 aaPredicted RBP29.31■■■□□ 2.28
LINC01003-201ENST00000564834 AIFM3Q96NN9 605 aa29.31■■■□□ 2.28
LINC01003-201ENST00000564834 MRIQ9BWK5 157 aa29.31■■■□□ 2.28
LINC01003-201ENST00000564834 USP17L3A6NCW0 530 aa29.3■■■□□ 2.28
LINC01003-201ENST00000564834 USP17L4A6NCW7 530 aa29.3■■■□□ 2.28
LINC01003-201ENST00000564834 SCNN1DP51172 638 aa29.3■■■□□ 2.28
LINC01003-201ENST00000564834 CCDC93Q567U6 631 aa29.3■■■□□ 2.28
LINC01003-201ENST00000564834 USP17L1Q7RTZ2 530 aa29.3■■■□□ 2.28
LINC01003-201ENST00000564834 GAS2L3Q86XJ1 694 aa29.3■■■□□ 2.28
LINC01003-201ENST00000564834 GJB4Q9NTQ9 266 aa29.3■■■□□ 2.28
LINC01003-201ENST00000564834 KCNA3P22001 575 aa29.29■■■□□ 2.28
LINC01003-201ENST00000564834 DGKHQ86XP1 1220 aa29.29■■■□□ 2.28
LINC01003-201ENST00000564834 ZNF444Q8N0Y2 327 aaPredicted RBP29.29■■■□□ 2.28
LINC01003-201ENST00000564834 TCP11L1Q9NUJ3 509 aa29.29■■■□□ 2.28
LINC01003-201ENST00000564834 MYH8P13535 1937 aa29.29■■■□□ 2.28
LINC01003-201ENST00000564834 DEXIO95424 95 aa29.29■■■□□ 2.28
LINC01003-201ENST00000564834 KIF23Q02241 960 aaPredicted RBP29.29■■■□□ 2.28
LINC01003-201ENST00000564834 TRIM29Q14134 588 aa29.29■■■□□ 2.28
LINC01003-201ENST00000564834 KRT40Q6A162 431 aa29.29■■■□□ 2.28
LINC01003-201ENST00000564834 RCSD1Q6JBY9 416 aa29.29■■■□□ 2.28
LINC01003-201ENST00000564834 RTKN2Q8IZC4 609 aa29.29■■■□□ 2.28
LINC01003-201ENST00000564834 TSPY3P0CV98 308 aa29.28■■■□□ 2.28
LINC01003-201ENST00000564834 TSPY8P0CW00 308 aa29.28■■■□□ 2.28
LINC01003-201ENST00000564834 DPEP1P16444 411 aa29.28■■■□□ 2.28
LINC01003-201ENST00000564834 RASA1P20936 1047 aa29.28■■■□□ 2.28
LINC01003-201ENST00000564834 MRE11P49959 708 aa29.28■■■□□ 2.28
LINC01003-201ENST00000564834 HDLBPQ00341 1268 aaKnown RBP29.28■■■□□ 2.28
LINC01003-201ENST00000564834 SLC44A5Q8NCS7 719 aa29.28■■■□□ 2.28
LINC01003-201ENST00000564834 ANKS1AQ92625 1134 aa29.28■■■□□ 2.28
LINC01003-201ENST00000564834 RNF26Q9BY78 433 aaPredicted RBP29.28■■■□□ 2.28
LINC01003-201ENST00000564834 PPIP5K2O43314 1243 aa29.27■■■□□ 2.28
LINC01003-201ENST00000564834 WDHD1O75717 1129 aaPredicted RBP29.27■■■□□ 2.28
LINC01003-201ENST00000564834 CRKP46108 304 aa29.27■■■□□ 2.28
LINC01003-201ENST00000564834 CDK8P49336 464 aa29.27■■■□□ 2.28
LINC01003-201ENST00000564834 APOBEC3HQ6NTF7 200 aaKnown RBP29.27■■■□□ 2.28
LINC01003-201ENST00000564834 ZDHHC15Q96MV8 337 aa29.27■■■□□ 2.28
LINC01003-201ENST00000564834 PSMD1Q99460 953 aa29.27■■■□□ 2.28
LINC01003-201ENST00000564834 IL17RBQ9NRM6 502 aa29.27■■■□□ 2.28
LINC01003-201ENST00000564834 UPF1Q92900 1129 aaKnown RBP eCLIP29.26■■■□□ 2.28
LINC01003-201ENST00000564834 USP28Q96RU2 1077 aa29.26■■■□□ 2.28
LINC01003-201ENST00000564834 USP40Q9NVE5 1235 aa29.26■■■□□ 2.28
LINC01003-201ENST00000564834 RCOR1Q9UKL0 485 aa29.26■■■□□ 2.28
LINC01003-201ENST00000564834 CCDC183Q5T5S1 534 aa29.26■■■□□ 2.27
LINC01003-201ENST00000564834 CDC42EP5Q6NZY7 148 aa29.26■■■□□ 2.27
LINC01003-201ENST00000564834 GOLGA6L4A6NEF3 574 aa29.25■■■□□ 2.27
LINC01003-201ENST00000564834 PICALMQ13492 652 aa29.25■■■□□ 2.27
LINC01003-201ENST00000564834 KIAA0825Q8IV33 1275 aa29.25■■■□□ 2.27
LINC01003-201ENST00000564834 CTCFLQ8NI51 663 aaPredicted RBP29.25■■■□□ 2.27
LINC01003-201ENST00000564834 GRPEL1Q9HAV7 217 aa29.25■■■□□ 2.27
LINC01003-201ENST00000564834 SYCE3A1L190 88 aa29.24■■■□□ 2.27
LINC01003-201ENST00000564834 KIF28PB7ZC32 967 aa29.24■■■□□ 2.27
LINC01003-201ENST00000564834 GUCY1A2P33402 732 aa29.24■■■□□ 2.27
LINC01003-201ENST00000564834 FUT2Q10981 343 aa29.24■■■□□ 2.27
LINC01003-201ENST00000564834 CMTR1Q8N1G2 835 aaKnown RBP29.24■■■□□ 2.27
LINC01003-201ENST00000564834 CCDC82Q8N4S0 544 aa29.24■■■□□ 2.27
LINC01003-201ENST00000564834 KAT14Q9H8E8 782 aa29.24■■■□□ 2.27
LINC01003-201ENST00000564834 DDX4Q9NQI0 724 aaKnown RBP29.24■■■□□ 2.27
LINC01003-201ENST00000564834 GOLGB1Q14789 3259 aaKnown RBP29.24■■■□□ 2.27
LINC01003-201ENST00000564834 UBE2Q2LH0YL09 131 aa29.24■■■□□ 2.27
LINC01003-201ENST00000564834 TPRNQ4KMQ1 711 aa29.24■■■□□ 2.27
LINC01003-201ENST00000564834 MYSM1Q5VVJ2 828 aa29.24■■■□□ 2.27
LINC01003-201ENST00000564834 LRSAM1Q6UWE0 723 aa29.24■■■□□ 2.27
LINC01003-201ENST00000564834 TMTC3Q6ZXV5 915 aa29.24■■■□□ 2.27
LINC01003-201ENST00000564834 ZBTB7AO95365 584 aa29.23■■■□□ 2.27
LINC01003-201ENST00000564834 CEBPZQ03701 1054 aaKnown RBP29.23■■■□□ 2.27
LINC01003-201ENST00000564834 MAP3K14Q99558 947 aa29.23■■■□□ 2.27
LINC01003-201ENST00000564834 TGFB2P61812 414 aa29.22■■■□□ 2.27
LINC01003-201ENST00000564834 AKAP17AQ02040 695 aaKnown RBP29.22■■■□□ 2.27
LINC01003-201ENST00000564834 PGBD1Q96JS3 809 aa29.22■■■□□ 2.27
LINC01003-201ENST00000564834 FTOQ9C0B1 505 aaKnown RBP eCLIP29.22■■■□□ 2.27
LINC01003-201ENST00000564834 MTFR1LQ9H019 292 aa29.22■■■□□ 2.27
LINC01003-201ENST00000564834 RTEL1Q9NZ71 1219 aa29.22■■■□□ 2.27
LINC01003-201ENST00000564834 SERPINA10Q9UK55 444 aa29.22■■■□□ 2.27
LINC01003-201ENST00000564834 PRPF3O43395 683 aaKnown RBP29.21■■■□□ 2.27
LINC01003-201ENST00000564834 PLEKHA8P1O95397 391 aa29.21■■■□□ 2.27
LINC01003-201ENST00000564834 U2AF2P26368 475 aaKnown RBP eCLIP29.21■■■□□ 2.27
LINC01003-201ENST00000564834 NEDD1Q8NHV4 660 aa29.21■■■□□ 2.27
LINC01003-201ENST00000564834 OSBPL5Q9H0X9 879 aaPredicted RBP29.21■■■□□ 2.27
LINC01003-201ENST00000564834 BRCA1P38398 1863 aaKnown RBP29.21■■■□□ 2.27
LINC01003-201ENST00000564834 YDJCA8MPS7 323 aa29.21■■■□□ 2.27
LINC01003-201ENST00000564834 XRCC6P12956 609 aaKnown RBP eCLIP29.21■■■□□ 2.27
LINC01003-201ENST00000564834 POLD1P28340 1107 aa29.21■■■□□ 2.27
LINC01003-201ENST00000564834 KIF5BP33176 963 aa29.21■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms