RNA–Protein interactions for RNA: ENST00000564634.5

CYLD-208, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 3

Gene CYLD, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-208ENST00000564634 LRP2BPQ9P2M1 347 aa30.69■■■□□ 2.5
CYLD-208ENST00000564634 HMGCRP04035 888 aa30.68■■■□□ 2.5
CYLD-208ENST00000564634 LDHCP07864 332 aa30.68■■■□□ 2.5
CYLD-208ENST00000564634 CAP2P40123 477 aa30.68■■■□□ 2.5
CYLD-208ENST00000564634 GCLCP48506 637 aaPredicted RBP30.68■■■□□ 2.5
CYLD-208ENST00000564634 TRIM32Q13049 653 aa30.68■■■□□ 2.5
CYLD-208ENST00000564634 NECAB2Q7Z6G3 386 aa30.68■■■□□ 2.5
CYLD-208ENST00000564634 TEX11Q8IYF3 940 aa30.68■■■□□ 2.5
CYLD-208ENST00000564634 LRRCC1Q9C099 1032 aa30.68■■■□□ 2.5
CYLD-208ENST00000564634 ASCC2Q9H1I8 757 aaPredicted RBP30.68■■■□□ 2.5
CYLD-208ENST00000564634 IGSF3O75054 1194 aa30.67■■■□□ 2.5
CYLD-208ENST00000564634 CYP2E1P05181 493 aaPredicted RBP30.67■■■□□ 2.5
CYLD-208ENST00000564634 ZAP70P43403 619 aa30.67■■■□□ 2.5
CYLD-208ENST00000564634 PABPC4Q13310 644 aaKnown RBP eCLIP30.67■■■□□ 2.5
CYLD-208ENST00000564634 AAMPQ13685 434 aa30.67■■■□□ 2.5
CYLD-208ENST00000564634 C7orf61Q8IZ16 206 aa30.67■■■□□ 2.5
CYLD-208ENST00000564634 LRCH3Q96II8 777 aa30.67■■■□□ 2.5
CYLD-208ENST00000564634 SIPA1L1O43166 1804 aa30.66■■■□□ 2.5
CYLD-208ENST00000564634 A0A1W2PPC1 479 aa30.66■■■□□ 2.5
CYLD-208ENST00000564634 USP17L5A8MUK1 530 aa30.66■■■□□ 2.5
CYLD-208ENST00000564634 CAPN2P17655 700 aa30.66■■■□□ 2.5
CYLD-208ENST00000564634 COL6A3P12111 3177 aa30.66■■■□□ 2.5
CYLD-208ENST00000564634 SH3RF3Q8TEJ3 882 aaPredicted RBP30.65■■■□□ 2.5
CYLD-208ENST00000564634 TBC1D2Q9BYX2 928 aa30.65■■■□□ 2.5
CYLD-208ENST00000564634 DDX60LQ5H9U9 1706 aaKnown RBP30.64■■■□□ 2.5
CYLD-208ENST00000564634 PLXNB2O15031 1838 aa30.64■■■□□ 2.5
CYLD-208ENST00000564634 MAP4K4O95819 1239 aaPredicted RBP30.64■■■□□ 2.5
CYLD-208ENST00000564634 MTMR2Q13614 643 aa30.64■■■□□ 2.5
CYLD-208ENST00000564634 BCL11AQ9H165 835 aa30.64■■■□□ 2.5
CYLD-208ENST00000564634 GJD2Q9UKL4 321 aa30.64■■■□□ 2.5
CYLD-208ENST00000564634 ZMYND8Q9ULU4 1186 aaPredicted RBP30.64■■■□□ 2.5
CYLD-208ENST00000564634 SUPT16HQ9Y5B9 1047 aaKnown RBP30.64■■■□□ 2.5
CYLD-208ENST00000564634 MAST2Q6P0Q8 1798 aa30.64■■■□□ 2.49
CYLD-208ENST00000564634 AS3MTQ9HBK9 375 aa30.63■■■□□ 2.49
CYLD-208ENST00000564634 HERC5Q9UII4 1024 aaKnown RBP30.63■■■□□ 2.49
CYLD-208ENST00000564634 PEX10O60683 326 aa30.62■■■□□ 2.49
CYLD-208ENST00000564634 SH3D19Q5HYK7 790 aa30.62■■■□□ 2.49
CYLD-208ENST00000564634 PPIL4Q8WUA2 492 aaKnown RBP eCLIP30.62■■■□□ 2.49
CYLD-208ENST00000564634 NOL10Q9BSC4 688 aaKnown RBP30.62■■■□□ 2.49
CYLD-208ENST00000564634 HMX1Q9NP08 348 aaPredicted RBP30.62■■■□□ 2.49
CYLD-208ENST00000564634 IRX3P78415 501 aaPredicted RBP30.61■■■□□ 2.49
CYLD-208ENST00000564634 ANKLE1Q8NAG6 615 aa30.61■■■□□ 2.49
CYLD-208ENST00000564634 TRIB2Q92519 343 aa30.61■■■□□ 2.49
CYLD-208ENST00000564634 AATFQ9NY61 560 aaKnown RBP eCLIP30.61■■■□□ 2.49
CYLD-208ENST00000564634 RPTORQ8N122 1335 aa30.61■■■□□ 2.49
CYLD-208ENST00000564634 SMARCA5O60264 1052 aaPredicted RBP30.6■■■□□ 2.49
CYLD-208ENST00000564634 CYP2B6P20813 491 aa30.6■■■□□ 2.49
CYLD-208ENST00000564634 SHROOM1Q2M3G4 852 aaPredicted RBP30.6■■■□□ 2.49
CYLD-208ENST00000564634 NAA16Q6N069 864 aaPredicted RBP30.6■■■□□ 2.49
CYLD-208ENST00000564634 PIH1D3Q9NQM4 214 aaKnown RBP30.6■■■□□ 2.49
CYLD-208ENST00000564634 MORF4L1Q9UBU8 362 aa30.6■■■□□ 2.49
CYLD-208ENST00000564634 MYO5AQ9Y4I1 1855 aaKnown RBP30.59■■■□□ 2.49
CYLD-208ENST00000564634 SLC17A8Q8NDX2 589 aa30.59■■■□□ 2.49
CYLD-208ENST00000564634 TMOD4Q9NZQ9 345 aa30.59■■■□□ 2.49
CYLD-208ENST00000564634 PI4KBQ9UBF8 816 aa30.59■■■□□ 2.49
CYLD-208ENST00000564634 SYN1P17600 705 aa30.58■■■□□ 2.49
CYLD-208ENST00000564634 MNX1P50219 401 aaPredicted RBP30.58■■■□□ 2.49
CYLD-208ENST00000564634 JAG1P78504 1218 aa30.58■■■□□ 2.49
CYLD-208ENST00000564634 MAPKAPK5Q8IW41 473 aa30.58■■■□□ 2.49
CYLD-208ENST00000564634 NBPF3Q9H094 633 aa30.58■■■□□ 2.49
CYLD-208ENST00000564634 CDK5RAP2Q96SN8 1893 aa30.57■■■□□ 2.48
CYLD-208ENST00000564634 TTF1Q15361 905 aaPredicted RBP30.57■■■□□ 2.48
CYLD-208ENST00000564634 P2RX7Q99572 595 aaKnown RBP30.57■■■□□ 2.48
CYLD-208ENST00000564634 GDF15Q99988 308 aa30.57■■■□□ 2.48
CYLD-208ENST00000564634 WDR18Q9BV38 432 aa30.57■■■□□ 2.48
CYLD-208ENST00000564634 DNAJC18Q9H819 358 aa30.57■■■□□ 2.48
CYLD-208ENST00000564634 TXNRD2Q9NNW7 524 aa30.57■■■□□ 2.48
CYLD-208ENST00000564634 NDUFB9Q9Y6M9 179 aa30.57■■■□□ 2.48
CYLD-208ENST00000564634 GDF11O95390 407 aa30.56■■■□□ 2.48
CYLD-208ENST00000564634 ASNSP08243 561 aa30.56■■■□□ 2.48
CYLD-208ENST00000564634 PRKAR2AP13861 404 aaKnown RBP30.56■■■□□ 2.48
CYLD-208ENST00000564634 BACE1P56817 501 aa30.56■■■□□ 2.48
CYLD-208ENST00000564634 TGFBRAP1Q8WUH2 860 aa30.56■■■□□ 2.48
CYLD-208ENST00000564634 C11orf49Q9H6J7 331 aa30.56■■■□□ 2.48
CYLD-208ENST00000564634 ANTXR1Q9H6X2 564 aa30.56■■■□□ 2.48
CYLD-208ENST00000564634 FLT1P17948 1338 aa30.55■■■□□ 2.48
CYLD-208ENST00000564634 IDH1O75874 414 aaKnown RBP30.55■■■□□ 2.48
CYLD-208ENST00000564634 ATP5JP18859 108 aa30.55■■■□□ 2.48
CYLD-208ENST00000564634 HERVK_113P62684 666 aa30.55■■■□□ 2.48
CYLD-208ENST00000564634 TMED8Q6PL24 325 aaPredicted RBP30.55■■■□□ 2.48
CYLD-208ENST00000564634 CRACR2BQ8N4Y2 399 aaPredicted RBP30.55■■■□□ 2.48
CYLD-208ENST00000564634 DHX36Q9H2U1 1008 aaKnown RBP30.55■■■□□ 2.48
CYLD-208ENST00000564634 BAG3O95817 575 aa30.54■■■□□ 2.48
CYLD-208ENST00000564634 MAP3K12Q12852 859 aa30.54■■■□□ 2.48
CYLD-208ENST00000564634 HDAC1Q13547 482 aaPredicted RBP30.54■■■□□ 2.48
CYLD-208ENST00000564634 ADGRA1Q86SQ6 560 aa30.54■■■□□ 2.48
CYLD-208ENST00000564634 EXOC6Q8TAG9 804 aa30.54■■■□□ 2.48
CYLD-208ENST00000564634 TRIM34Q9BYJ4 488 aa30.54■■■□□ 2.48
CYLD-208ENST00000564634 FOCADQ5VW36 1801 aa30.54■■■□□ 2.48
CYLD-208ENST00000564634 MAP3K21Q5TCX8 1036 aa30.53■■■□□ 2.48
CYLD-208ENST00000564634 GPRC5AQ8NFJ5 357 aa30.53■■■□□ 2.48
CYLD-208ENST00000564634 SOCS4Q8WXH5 440 aa30.53■■■□□ 2.48
CYLD-208ENST00000564634 NUDT12Q9BQG2 462 aa30.53■■■□□ 2.48
CYLD-208ENST00000564634 SAP30BPQ9UHR5 308 aaKnown RBP30.53■■■□□ 2.48
CYLD-208ENST00000564634 OGDHLQ9ULD0 1010 aa30.53■■■□□ 2.48
CYLD-208ENST00000564634 PLCG2P16885 1265 aa30.52■■■□□ 2.48
CYLD-208ENST00000564634 HOXA7P31268 230 aaPredicted RBP30.52■■■□□ 2.48
CYLD-208ENST00000564634 BMP8BP34820 402 aa30.52■■■□□ 2.48
CYLD-208ENST00000564634 PPP4CP60510 307 aa30.52■■■□□ 2.48
CYLD-208ENST00000564634 DNAJC2Q99543 621 aaKnown RBP30.52■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms