RNA–Protein interactions for RNA: ENST00000563917.2

CLN6-203, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-203ENST00000563917 GTF3C2Q8WUA4 911 aaPredicted RBP11.61□□□□□ -0.55
CLN6-203ENST00000563917 FEZ1Q99689 392 aa11.61□□□□□ -0.55
CLN6-203ENST00000563917 ASCC2Q9H1I8 757 aaPredicted RBP11.61□□□□□ -0.55
CLN6-203ENST00000563917 CABP5Q9NP86 173 aa11.61□□□□□ -0.55
CLN6-203ENST00000563917 TLR7Q9NYK1 1049 aaKnown RBP11.61□□□□□ -0.55
CLN6-203ENST00000563917 NR2E3Q9Y5X4 410 aa11.61□□□□□ -0.55
CLN6-203ENST00000563917 MGAMO43451 1857 aa11.6□□□□□ -0.55
CLN6-203ENST00000563917 APBB1O00213 710 aa11.6□□□□□ -0.55
CLN6-203ENST00000563917 INHAP05111 366 aa11.6□□□□□ -0.55
CLN6-203ENST00000563917 ELNP15502 786 aa11.6□□□□□ -0.55
CLN6-203ENST00000563917 DYNLL1P63167 89 aaKnown RBP11.6□□□□□ -0.55
CLN6-203ENST00000563917 PDE3AQ14432 1141 aa11.6□□□□□ -0.55
CLN6-203ENST00000563917 HABP4Q5JVS0 413 aaKnown RBP11.6□□□□□ -0.55
CLN6-203ENST00000563917 ADGRA1Q86SQ6 560 aa11.6□□□□□ -0.55
CLN6-203ENST00000563917 RHPN1Q8TCX5 695 aa11.6□□□□□ -0.55
CLN6-203ENST00000563917 U2AF1L4Q8WU68 220 aaKnown RBP11.6□□□□□ -0.55
CLN6-203ENST00000563917 KIF1BPQ96EK5 621 aa11.6□□□□□ -0.55
CLN6-203ENST00000563917 SERPINB13Q9UIV8 391 aa11.6□□□□□ -0.55
CLN6-203ENST00000563917 ZBTB21Q9ULJ3 1066 aa11.6□□□□□ -0.55
CLN6-203ENST00000563917 PTPRFP10586 1907 aa11.6□□□□□ -0.55
CLN6-203ENST00000563917 PHIPQ8WWQ0 1821 aa11.6□□□□□ -0.55
CLN6-203ENST00000563917 ATAD5Q96QE3 1844 aa11.6□□□□□ -0.55
CLN6-203ENST00000563917 MAGEB6P1A0A0J9YX57 407 aa11.59□□□□□ -0.55
CLN6-203ENST00000563917 RAB11FIP3O75154 756 aa11.59□□□□□ -0.55
CLN6-203ENST00000563917 FARP2O94887 1054 aaPredicted RBP11.59□□□□□ -0.55
CLN6-203ENST00000563917 SGPL1O95470 568 aa11.59□□□□□ -0.55
CLN6-203ENST00000563917 POLR3DP05423 398 aaPredicted RBP11.59□□□□□ -0.55
CLN6-203ENST00000563917 USP14P54578 494 aa11.59□□□□□ -0.55
CLN6-203ENST00000563917 CERKLQ49MI3 558 aaPredicted RBP11.59□□□□□ -0.55
CLN6-203ENST00000563917 USP17L2Q6R6M4 530 aa11.59□□□□□ -0.55
CLN6-203ENST00000563917 METTL16Q86W50 562 aaKnown RBP11.59□□□□□ -0.55
CLN6-203ENST00000563917 GPRC5AQ8NFJ5 357 aa11.59□□□□□ -0.55
CLN6-203ENST00000563917 CRNKL1Q9BZJ0 848 aaKnown RBP11.59□□□□□ -0.55
CLN6-203ENST00000563917 UNC93B1Q9H1C4 597 aa11.59□□□□□ -0.55
CLN6-203ENST00000563917 IL1RAPL2Q9NP60 686 aa11.59□□□□□ -0.55
CLN6-203ENST00000563917 GH2P01242 217 aa11.58□□□□□ -0.56
CLN6-203ENST00000563917 HMGCRP04035 888 aa11.58□□□□□ -0.56
CLN6-203ENST00000563917 HOXA7P31268 230 aaPredicted RBP11.58□□□□□ -0.56
CLN6-203ENST00000563917 HERVK_113P62684 666 aa11.58□□□□□ -0.56
CLN6-203ENST00000563917 RRP1BQ14684 758 aaKnown RBP11.58□□□□□ -0.56
CLN6-203ENST00000563917 RAB3GAP1Q15042 981 aa11.58□□□□□ -0.56
CLN6-203ENST00000563917 SLC9C2Q5TAH2 1124 aa11.58□□□□□ -0.56
CLN6-203ENST00000563917 AMOTL1Q8IY63 956 aa11.58□□□□□ -0.56
CLN6-203ENST00000563917 DEFB118Q96PH6 123 aa11.58□□□□□ -0.56
CLN6-203ENST00000563917 DNAJC2Q99543 621 aaKnown RBP11.58□□□□□ -0.56
CLN6-203ENST00000563917 EHD4Q9H223 541 aa11.58□□□□□ -0.56
CLN6-203ENST00000563917 COG6Q9Y2V7 657 aa11.58□□□□□ -0.56
CLN6-203ENST00000563917 LOC285556D6RIA3 1793 aa11.57□□□□□ -0.56
CLN6-203ENST00000563917 H0YGN5 161 aa11.57□□□□□ -0.56
CLN6-203ENST00000563917 GLRX3O76003 335 aaKnown RBP11.57□□□□□ -0.56
CLN6-203ENST00000563917 MAPK4P31152 587 aa11.57□□□□□ -0.56
CLN6-203ENST00000563917 CCNA1P78396 465 aa11.57□□□□□ -0.56
CLN6-203ENST00000563917 ABCB5Q2M3G0 1257 aa11.57□□□□□ -0.56
CLN6-203ENST00000563917 TRMT44Q8IYL2 757 aaKnown RBP11.57□□□□□ -0.56
CLN6-203ENST00000563917 SOCS4Q8WXH5 440 aa11.57□□□□□ -0.56
CLN6-203ENST00000563917 SHISA4Q96DD7 197 aa11.57□□□□□ -0.56
CLN6-203ENST00000563917 DDRGK1Q96HY6 314 aa11.57□□□□□ -0.56
CLN6-203ENST00000563917 P2RX7Q99572 595 aaKnown RBP11.57□□□□□ -0.56
CLN6-203ENST00000563917 NUDT12Q9BQG2 462 aa11.57□□□□□ -0.56
CLN6-203ENST00000563917 PAGR1Q9BTK6 254 aa11.57□□□□□ -0.56
CLN6-203ENST00000563917 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.57□□□□□ -0.56
CLN6-203ENST00000563917 ANTXR1Q9H6X2 564 aa11.57□□□□□ -0.56
CLN6-203ENST00000563917 HMX1Q9NP08 348 aaPredicted RBP11.57□□□□□ -0.56
CLN6-203ENST00000563917 MORF4L1Q9UBU8 362 aa11.57□□□□□ -0.56
CLN6-203ENST00000563917 NDUFB9Q9Y6M9 179 aa11.57□□□□□ -0.56
CLN6-203ENST00000563917 HTTP42858 3142 aa11.56□□□□□ -0.56
CLN6-203ENST00000563917 USP17L15C9J2P7 530 aa11.56□□□□□ -0.56
CLN6-203ENST00000563917 USP17L13C9JLJ4 530 aa11.56□□□□□ -0.56
CLN6-203ENST00000563917 USP17L11C9JVI0 530 aa11.56□□□□□ -0.56
CLN6-203ENST00000563917 USP17L18D6R9N7 530 aa11.56□□□□□ -0.56
CLN6-203ENST00000563917 USP17L22D6RA61 530 aa11.56□□□□□ -0.56
CLN6-203ENST00000563917 USP17L17D6RBQ6 530 aa11.56□□□□□ -0.56
CLN6-203ENST00000563917 USP17L19D6RCP7 530 aa11.56□□□□□ -0.56
CLN6-203ENST00000563917 USP17L20D6RJB6 530 aa11.56□□□□□ -0.56
CLN6-203ENST00000563917 GOLIM4O00461 696 aa11.56□□□□□ -0.56
CLN6-203ENST00000563917 MPHOSPH10O00566 681 aaKnown RBP11.56□□□□□ -0.56
CLN6-203ENST00000563917 USP17L24Q0WX57 530 aa11.56□□□□□ -0.56
CLN6-203ENST00000563917 ZYXQ15942 572 aaKnown RBP11.56□□□□□ -0.56
CLN6-203ENST00000563917 TATDN1Q6P1N9 297 aa11.56□□□□□ -0.56
CLN6-203ENST00000563917 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.56□□□□□ -0.56
CLN6-203ENST00000563917 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.56□□□□□ -0.564e-8■■■■□ 25.2
CLN6-203ENST00000563917 DNAJC18Q9H819 358 aa11.56□□□□□ -0.56
CLN6-203ENST00000563917 MCM9Q9NXL9 1143 aa11.56□□□□□ -0.56
CLN6-203ENST00000563917 RCAN3Q9UKA8 241 aa11.56□□□□□ -0.56
CLN6-203ENST00000563917 MYH1P12882 1939 aa11.56□□□□□ -0.56
CLN6-203ENST00000563917 FOCADQ5VW36 1801 aa11.56□□□□□ -0.56
CLN6-203ENST00000563917 EVI5O60447 810 aa11.55□□□□□ -0.56
CLN6-203ENST00000563917 PDE6AP16499 860 aa11.55□□□□□ -0.56
CLN6-203ENST00000563917 CYP2B6P20813 491 aa11.55□□□□□ -0.56
CLN6-203ENST00000563917 WDR78Q5VTH9 848 aa11.55□□□□□ -0.56
CLN6-203ENST00000563917 NECAB2Q7Z6G3 386 aa11.55□□□□□ -0.56
CLN6-203ENST00000563917 COLQQ9Y215 455 aaPredicted RBP11.55□□□□□ -0.56
CLN6-203ENST00000563917 IVNS1ABPQ9Y6Y0 642 aa11.55□□□□□ -0.56
CLN6-203ENST00000563917 RPTORQ8N122 1335 aa11.55□□□□□ -0.56
CLN6-203ENST00000563917 ZNF532Q9HCE3 1301 aa11.55□□□□□ -0.56
CLN6-203ENST00000563917 MYO5AQ9Y4I1 1855 aaKnown RBP11.55□□□□□ -0.56
CLN6-203ENST00000563917 ZKSCAN1P17029 563 aaPredicted RBP11.54□□□□□ -0.56
CLN6-203ENST00000563917 RGS2P41220 211 aa11.54□□□□□ -0.56
CLN6-203ENST00000563917 ERVK-9P63128 1117 aa11.54□□□□□ -0.56
CLN6-203ENST00000563917 ERVK-24P63145 666 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms