RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 SOBPA7XYQ1 873 aa6.46□□□□□ -1.38
HERPUD1-207ENST00000563781 M0R2N6 131 aa6.46□□□□□ -1.38
HERPUD1-207ENST00000563781 NPR1P16066 1061 aa6.46□□□□□ -1.38
HERPUD1-207ENST00000563781 DPEP1P16444 411 aa6.46□□□□□ -1.38
HERPUD1-207ENST00000563781 ITGA6P23229 1130 aa6.46□□□□□ -1.38
HERPUD1-207ENST00000563781 YY1P25490 414 aa6.46□□□□□ -1.38
HERPUD1-207ENST00000563781 TGFB2P61812 414 aa6.46□□□□□ -1.38
HERPUD1-207ENST00000563781 ATP8B2P98198 1209 aa6.46□□□□□ -1.38
HERPUD1-207ENST00000563781 PTPN12Q05209 780 aaKnown RBP6.46□□□□□ -1.38
HERPUD1-207ENST00000563781 GRAPQ13588 217 aa6.46□□□□□ -1.38
HERPUD1-207ENST00000563781 AAMPQ13685 434 aa6.46□□□□□ -1.38
HERPUD1-207ENST00000563781 MTFR1Q15390 333 aa6.46□□□□□ -1.38
HERPUD1-207ENST00000563781 CCDC152Q4G0S7 254 aa6.46□□□□□ -1.38
HERPUD1-207ENST00000563781 STYK1Q6J9G0 422 aa6.46□□□□□ -1.38
HERPUD1-207ENST00000563781 GRAPLQ8TC17 118 aaPredicted RBP6.46□□□□□ -1.38
HERPUD1-207ENST00000563781 SSH3Q8TE77 659 aa6.46□□□□□ -1.38
HERPUD1-207ENST00000563781 CELF1Q92879 486 aaKnown RBP6.46□□□□□ -1.38
HERPUD1-207ENST00000563781 CHMP4BQ9H444 224 aaKnown RBP6.46□□□□□ -1.38
HERPUD1-207ENST00000563781 NOVA2Q9UNW9 492 aaKnown RBP6.46□□□□□ -1.38
HERPUD1-207ENST00000563781 HDAC5Q9UQL6 1122 aa6.46□□□□□ -1.38
HERPUD1-207ENST00000563781 KIF13BQ9NQT8 1826 aa6.46□□□□□ -1.38
HERPUD1-207ENST00000563781 SNED1Q8TER0 1413 aa6.45□□□□□ -1.38
HERPUD1-207ENST00000563781 A6NJY4 79 aa6.45□□□□□ -1.38
HERPUD1-207ENST00000563781 H0YIN7 160 aa6.45□□□□□ -1.38
HERPUD1-207ENST00000563781 CDK2AP1O14519 115 aa6.45□□□□□ -1.38
HERPUD1-207ENST00000563781 SRGAP3O43295 1099 aa6.45□□□□□ -1.38
HERPUD1-207ENST00000563781 MAN1A2O60476 641 aa6.45□□□□□ -1.38
HERPUD1-207ENST00000563781 TLR1Q15399 786 aa6.45□□□□□ -1.38
HERPUD1-207ENST00000563781 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.45□□□□□ -1.385e-6■■□□□ 11.7
HERPUD1-207ENST00000563781 DDX46Q7L014 1031 aaKnown RBP6.45□□□□□ -1.38
HERPUD1-207ENST00000563781 LYSMD3Q7Z3D4 306 aa6.45□□□□□ -1.38
HERPUD1-207ENST00000563781 RPAP2Q8IXW5 612 aaPredicted RBP6.45□□□□□ -1.38
HERPUD1-207ENST00000563781 FAM177A1Q8N128 213 aaPredicted RBP6.45□□□□□ -1.38
HERPUD1-207ENST00000563781 KLHDC4Q8TBB5 520 aa6.45□□□□□ -1.38
HERPUD1-207ENST00000563781 FAM200AQ8TCP9 573 aa6.45□□□□□ -1.38
HERPUD1-207ENST00000563781 RPGRQ92834 1020 aaKnown RBP6.45□□□□□ -1.38
HERPUD1-207ENST00000563781 MRRFQ96E11 262 aaKnown RBP6.45□□□□□ -1.38
HERPUD1-207ENST00000563781 MASTLQ96GX5 879 aa6.45□□□□□ -1.38
HERPUD1-207ENST00000563781 RBM17Q96I25 401 aaKnown RBP6.45□□□□□ -1.38
HERPUD1-207ENST00000563781 CRAMP1Q96RY5 1269 aa6.45□□□□□ -1.38
HERPUD1-207ENST00000563781 ZSCAN10Q96SZ4 725 aaPredicted RBP6.45□□□□□ -1.38
HERPUD1-207ENST00000563781 PPP1R1BQ9UD71 204 aaPredicted RBP6.45□□□□□ -1.38
HERPUD1-207ENST00000563781 ZMIZ1Q9ULJ6 1067 aa6.45□□□□□ -1.38
HERPUD1-207ENST00000563781 PA2G4Q9UQ80 394 aaKnown RBP6.45□□□□□ -1.38
HERPUD1-207ENST00000563781 CHMP3Q9Y3E7 222 aa6.45□□□□□ -1.38
HERPUD1-207ENST00000563781 RBM19Q9Y4C8 960 aaKnown RBP6.45□□□□□ -1.38
HERPUD1-207ENST00000563781 ANKRD18BA2A2Z9 1011 aa6.44□□□□□ -1.38
HERPUD1-207ENST00000563781 NEFLP07196 543 aa6.44□□□□□ -1.38
HERPUD1-207ENST00000563781 VAMP1P23763 118 aa6.44□□□□□ -1.38
HERPUD1-207ENST00000563781 EPHA4P54764 986 aa6.44□□□□□ -1.38
HERPUD1-207ENST00000563781 RPS8P62241 208 aaKnown RBP6.44□□□□□ -1.38
HERPUD1-207ENST00000563781 IFIT5Q13325 482 aaKnown RBP6.44□□□□□ -1.38
HERPUD1-207ENST00000563781 CCDC57Q2TAC2 916 aa6.44□□□□□ -1.38
HERPUD1-207ENST00000563781 LRRC24Q50LG9 513 aa6.44□□□□□ -1.38
HERPUD1-207ENST00000563781 PHLDB3Q6NSJ2 640 aa6.44□□□□□ -1.38
HERPUD1-207ENST00000563781 PRPF40BQ6NWY9 871 aaKnown RBP6.44□□□□□ -1.38
HERPUD1-207ENST00000563781 PRICKLE2Q7Z3G6 844 aa6.44□□□□□ -1.38
HERPUD1-207ENST00000563781 TNS4Q8IZW8 715 aa6.44□□□□□ -1.38
HERPUD1-207ENST00000563781 TSEN2Q8NCE0 465 aaKnown RBP6.44□□□□□ -1.38
HERPUD1-207ENST00000563781 C7orf43Q8WVR3 580 aa6.44□□□□□ -1.38
HERPUD1-207ENST00000563781 ZNF622Q969S3 477 aaKnown RBP eCLIP6.44□□□□□ -1.385e-11■■□□□ 11.8
HERPUD1-207ENST00000563781 CDC5LQ99459 802 aaKnown RBP6.44□□□□□ -1.38
HERPUD1-207ENST00000563781 SYT17Q9BSW7 474 aa6.44□□□□□ -1.38
HERPUD1-207ENST00000563781 PUS3Q9BZE2 481 aaKnown RBP6.44□□□□□ -1.38
HERPUD1-207ENST00000563781 COPRSQ9NQ92 184 aa6.44□□□□□ -1.38
HERPUD1-207ENST00000563781 SCHIP1Q9P0W5 487 aaPredicted RBP6.44□□□□□ -1.38
HERPUD1-207ENST00000563781 NOP58Q9Y2X3 529 aaKnown RBP6.44□□□□□ -1.38
HERPUD1-207ENST00000563781 SPATA31C2B4DYI2 1134 aa6.43□□□□□ -1.38
HERPUD1-207ENST00000563781 EYA2O00167 538 aa6.43□□□□□ -1.38
HERPUD1-207ENST00000563781 ZNF16P17020 682 aaPredicted RBP6.43□□□□□ -1.38
HERPUD1-207ENST00000563781 FOXK2Q01167 660 aa6.43□□□□□ -1.38
HERPUD1-207ENST00000563781 POU4F2Q12837 409 aa6.43□□□□□ -1.38
HERPUD1-207ENST00000563781 HDAC1Q13547 482 aaPredicted RBP6.43□□□□□ -1.38
HERPUD1-207ENST00000563781 ERICH6BQ5W0A0 696 aa6.43□□□□□ -1.38
HERPUD1-207ENST00000563781 OLFM4Q6UX06 510 aa6.43□□□□□ -1.38
HERPUD1-207ENST00000563781 ATG9AQ7Z3C6 839 aa6.43□□□□□ -1.38
HERPUD1-207ENST00000563781 ANKRD18AQ8IVF6 992 aa6.43□□□□□ -1.38
HERPUD1-207ENST00000563781 ZNF295-AS1Q8N0V1 137 aa6.43□□□□□ -1.38
HERPUD1-207ENST00000563781 TTLL6Q8N841 843 aa6.43□□□□□ -1.38
HERPUD1-207ENST00000563781 STK32AQ8WU08 396 aa6.43□□□□□ -1.38
HERPUD1-207ENST00000563781 SIL1Q9H173 461 aa6.43□□□□□ -1.38
HERPUD1-207ENST00000563781 BSDC1Q9NW68 430 aaPredicted RBP6.43□□□□□ -1.38
HERPUD1-207ENST00000563781 WWC3Q9ULE0 1092 aa6.43□□□□□ -1.38
HERPUD1-207ENST00000563781 IQSEC3Q9UPP2 1182 aaPredicted RBP6.43□□□□□ -1.38
HERPUD1-207ENST00000563781 RIPOR2Q9Y4F9 1068 aa6.43□□□□□ -1.38
HERPUD1-207ENST00000563781 USP3Q9Y6I4 520 aa6.43□□□□□ -1.38
HERPUD1-207ENST00000563781 UTRNP46939 3433 aa6.43□□□□□ -1.38
HERPUD1-207ENST00000563781 DLEC1Q9Y238 1755 aa6.42□□□□□ -1.38
HERPUD1-207ENST00000563781 HMMRO75330 724 aa6.42□□□□□ -1.38
HERPUD1-207ENST00000563781 BBOX1O75936 387 aa6.42□□□□□ -1.38
HERPUD1-207ENST00000563781 CIAO1O76071 339 aa6.42□□□□□ -1.38
HERPUD1-207ENST00000563781 SASH1O94885 1247 aa6.42□□□□□ -1.38
HERPUD1-207ENST00000563781 IGHDP01880 384 aa6.42□□□□□ -1.38
HERPUD1-207ENST00000563781 TCF3P15923 654 aa6.42□□□□□ -1.38
HERPUD1-207ENST00000563781 RHOQP17081 205 aa6.42□□□□□ -1.38
HERPUD1-207ENST00000563781 ARID4AP29374 1257 aaPredicted RBP6.42□□□□□ -1.38
HERPUD1-207ENST00000563781 ALDH1B1P30837 517 aa6.42□□□□□ -1.38
HERPUD1-207ENST00000563781 IGHMBP2P38935 993 aaKnown RBP6.42□□□□□ -1.38
HERPUD1-207ENST00000563781 TAF7LQ5H9L4 462 aa6.42□□□□□ -1.38
HERPUD1-207ENST00000563781 WDR44Q5JSH3 913 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms