RNA–Protein interactions for RNA: ENST00000563346.1

TSC2-219, Transcript of TSC complex subunit 2, humanhuman

TSL 2

Gene TSC2, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-219ENST00000563346 SHISA4Q96DD7 197 aa21.08■□□□□ 0.97
TSC2-219ENST00000563346 ASCC2Q9H1I8 757 aaPredicted RBP21.08■□□□□ 0.97
TSC2-219ENST00000563346 DNAJC18Q9H819 358 aa21.08■□□□□ 0.97
TSC2-219ENST00000563346 IL1RAPL2Q9NP60 686 aa21.08■□□□□ 0.97
TSC2-219ENST00000563346 GINM1Q9NU53 330 aa21.08■□□□□ 0.97
TSC2-219ENST00000563346 ELNP15502 786 aa21.07■□□□□ 0.96
TSC2-219ENST00000563346 BACE1P56817 501 aa21.07■□□□□ 0.96
TSC2-219ENST00000563346 IRX3P78415 501 aaPredicted RBP21.07■□□□□ 0.96
TSC2-219ENST00000563346 IRF5Q13568 498 aa21.07■□□□□ 0.96
TSC2-219ENST00000563346 PXYLP1Q8TE99 480 aa21.07■□□□□ 0.96
TSC2-219ENST00000563346 ANTXR1Q9H6X2 564 aa21.07■□□□□ 0.96
TSC2-219ENST00000563346 INHAP05111 366 aa21.06■□□□□ 0.96
TSC2-219ENST00000563346 RHPN1Q8TCX5 695 aa21.06■□□□□ 0.96
TSC2-219ENST00000563346 UNC93B1Q9H1C4 597 aa21.06■□□□□ 0.96
TSC2-219ENST00000563346 ZBTB21Q9ULJ3 1066 aa21.06■□□□□ 0.96
TSC2-219ENST00000563346 C19orf81C9J6K1 198 aa21.05■□□□□ 0.96
TSC2-219ENST00000563346 USP17L10C9JJH3 530 aa21.05■□□□□ 0.96
TSC2-219ENST00000563346 H0YGN5 161 aa21.05■□□□□ 0.96
TSC2-219ENST00000563346 APBB1O00213 710 aa21.05■□□□□ 0.96
TSC2-219ENST00000563346 HMMRO75330 724 aa21.05■□□□□ 0.96
TSC2-219ENST00000563346 JAG1P78504 1218 aa21.05■□□□□ 0.96
TSC2-219ENST00000563346 TMED8Q6PL24 325 aaPredicted RBP21.05■□□□□ 0.96
TSC2-219ENST00000563346 CLASRPQ8N2M8 674 aaKnown RBP21.05■□□□□ 0.96
TSC2-219ENST00000563346 DPF3Q92784 378 aa21.05■□□□□ 0.96
TSC2-219ENST00000563346 BCL11AQ9H165 835 aa21.05■□□□□ 0.96
TSC2-219ENST00000563346 MYH1P12882 1939 aa21.05■□□□□ 0.96
TSC2-219ENST00000563346 TTF1Q15361 905 aaPredicted RBP21.04■□□□□ 0.96
TSC2-219ENST00000563346 RPAP2Q8IXW5 612 aaPredicted RBP21.04■□□□□ 0.96
TSC2-219ENST00000563346 U2AF1L4Q8WU68 220 aaKnown RBP21.04■□□□□ 0.96
TSC2-219ENST00000563346 DDX19BQ9UMR2 479 aa21.04■□□□□ 0.96
TSC2-219ENST00000563346 TRIOBPQ9H2D6 2365 aa21.04■□□□□ 0.96
TSC2-219ENST00000563346 IFIT2P09913 472 aaKnown RBP21.03■□□□□ 0.96
TSC2-219ENST00000563346 SHROOM1Q2M3G4 852 aaPredicted RBP21.03■□□□□ 0.96
TSC2-219ENST00000563346 KIF1BPQ96EK5 621 aa21.03■□□□□ 0.96
TSC2-219ENST00000563346 SERPINB13Q9UIV8 391 aa21.03■□□□□ 0.96
TSC2-219ENST00000563346 COG6Q9Y2V7 657 aa21.03■□□□□ 0.96
TSC2-219ENST00000563346 SGPL1O95470 568 aa21.02■□□□□ 0.96
TSC2-219ENST00000563346 GH2P01242 217 aa21.02■□□□□ 0.96
TSC2-219ENST00000563346 HOXA7P31268 230 aaPredicted RBP21.02■□□□□ 0.96
TSC2-219ENST00000563346 TTC6Q86TZ1 520 aa21.02■□□□□ 0.96
TSC2-219ENST00000563346 HTATIP2Q9BUP3 242 aa21.02■□□□□ 0.96
TSC2-219ENST00000563346 CHMP4BQ9H444 224 aaKnown RBP21.02■□□□□ 0.96
TSC2-219ENST00000563346 MAGEB6P1A0A0J9YX57 407 aa21.01■□□□□ 0.95
TSC2-219ENST00000563346 FARP2O94887 1054 aaPredicted RBP21.01■□□□□ 0.95
TSC2-219ENST00000563346 TFRCP02786 760 aaKnown RBP21.01■□□□□ 0.95
TSC2-219ENST00000563346 USP17L2Q6R6M4 530 aa21.01■□□□□ 0.95
TSC2-219ENST00000563346 DEFB118Q96PH6 123 aa21.01■□□□□ 0.95
TSC2-219ENST00000563346 P2RX7Q99572 595 aaKnown RBP21.01■□□□□ 0.95
TSC2-219ENST00000563346 FEZ1Q99689 392 aa21.01■□□□□ 0.95
TSC2-219ENST00000563346 EHD4Q9H223 541 aa21.01■□□□□ 0.95
TSC2-219ENST00000563346 MORF4L1Q9UBU8 362 aa21.01■□□□□ 0.95
TSC2-219ENST00000563346 HERVK_113P62684 666 aa21■□□□□ 0.95
TSC2-219ENST00000563346 SLC9C2Q5TAH2 1124 aa21■□□□□ 0.95
TSC2-219ENST00000563346 TATDN1Q6P1N9 297 aa21■□□□□ 0.95
TSC2-219ENST00000563346 CHRDL2Q6WN34 429 aa21■□□□□ 0.95
TSC2-219ENST00000563346 GPRC5AQ8NFJ5 357 aa21■□□□□ 0.95
TSC2-219ENST00000563346 DNAJC2Q99543 621 aaKnown RBP21■□□□□ 0.95
TSC2-219ENST00000563346 ZBTB40Q9NUA8 1239 aa21■□□□□ 0.95
TSC2-219ENST00000563346 SZT2Q5T011 3432 aa21■□□□□ 0.95
TSC2-219ENST00000563346 DOCK3Q8IZD9 2030 aa20.99■□□□□ 0.95
TSC2-219ENST00000563346 GOLIM4O00461 696 aa20.99■□□□□ 0.95
TSC2-219ENST00000563346 POLR3DP05423 398 aaPredicted RBP20.99■□□□□ 0.95
TSC2-219ENST00000563346 RAB3GAP1Q15042 981 aa20.99■□□□□ 0.95
TSC2-219ENST00000563346 CERKLQ49MI3 558 aaPredicted RBP20.99■□□□□ 0.95
TSC2-219ENST00000563346 CCAR1Q8IX12 1150 aaKnown RBP20.99■□□□□ 0.95
TSC2-219ENST00000563346 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.99■□□□□ 0.95
TSC2-219ENST00000563346 RIOK1Q9BRS2 568 aaKnown RBP20.99■□□□□ 0.95
TSC2-219ENST00000563346 RAB11FIP3O75154 756 aa20.98■□□□□ 0.95
TSC2-219ENST00000563346 HMGCRP04035 888 aa20.98■□□□□ 0.95
TSC2-219ENST00000563346 PDE6AP16499 860 aa20.98■□□□□ 0.95
TSC2-219ENST00000563346 CAPN2P17655 700 aa20.98■□□□□ 0.95
TSC2-219ENST00000563346 ZYXQ15942 572 aaKnown RBP20.98■□□□□ 0.95
TSC2-219ENST00000563346 ABCB5Q2M3G0 1257 aa20.98■□□□□ 0.95
TSC2-219ENST00000563346 UBE2Q1Q7Z7E8 422 aa20.98■□□□□ 0.95
TSC2-219ENST00000563346 GTF3C2Q8WUA4 911 aaPredicted RBP20.98■□□□□ 0.95
TSC2-219ENST00000563346 CRNKL1Q9BZJ0 848 aaKnown RBP20.98■□□□□ 0.95
TSC2-219ENST00000563346 CABP5Q9NP86 173 aa20.98■□□□□ 0.95
TSC2-219ENST00000563346 EMILIN3Q9NT22 766 aa20.98■□□□□ 0.95
TSC2-219ENST00000563346 RCAN3Q9UKA8 241 aa20.98■□□□□ 0.95
TSC2-219ENST00000563346 SIRT2Q8IXJ6 389 aa20.97■□□□□ 0.95
TSC2-219ENST00000563346 PAGR1Q9BTK6 254 aa20.97■□□□□ 0.95
TSC2-219ENST00000563346 PAK6Q9NQU5 681 aaPredicted RBP20.97■□□□□ 0.95
TSC2-219ENST00000563346 GJD2Q9UKL4 321 aa20.97■□□□□ 0.95
TSC2-219ENST00000563346 ZNF532Q9HCE3 1301 aa20.97■□□□□ 0.95
TSC2-219ENST00000563346 NAV1Q8NEY1 1877 aa20.96■□□□□ 0.95
TSC2-219ENST00000563346 PEX10O60683 326 aa20.96■□□□□ 0.95
TSC2-219ENST00000563346 CYP2B6P20813 491 aa20.96■□□□□ 0.95
TSC2-219ENST00000563346 PLCD1P51178 756 aa20.96■□□□□ 0.95
TSC2-219ENST00000563346 PDE3AQ14432 1141 aa20.96■□□□□ 0.95
TSC2-219ENST00000563346 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.96■□□□□ 0.95
TSC2-219ENST00000563346 TXNRD2Q9NNW7 524 aa20.96■□□□□ 0.95
TSC2-219ENST00000563346 MAPK4P31152 587 aa20.95■□□□□ 0.94
TSC2-219ENST00000563346 USP14P54578 494 aa20.95■□□□□ 0.94
TSC2-219ENST00000563346 SOCS4Q8WXH5 440 aa20.95■□□□□ 0.94
TSC2-219ENST00000563346 NUDT12Q9BQG2 462 aa20.95■□□□□ 0.94
TSC2-219ENST00000563346 CWC22Q9HCG8 908 aaKnown RBP20.95■□□□□ 0.94
TSC2-219ENST00000563346 HMX1Q9NP08 348 aaPredicted RBP20.95■□□□□ 0.94
TSC2-219ENST00000563346 MCM9Q9NXL9 1143 aa20.95■□□□□ 0.94
TSC2-219ENST00000563346 RBPJLQ9UBG7 517 aa20.95■□□□□ 0.94
TSC2-219ENST00000563346 NR2E3Q9Y5X4 410 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms