RNA–Protein interactions for RNA: ENST00000563255.1

CDH11-207, Transcript of cadherin 11, humanhuman

TSL 5

Gene CDH11, Length 545 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-207ENST00000563255 ZSWIM6Q9HCJ5 1215 aa17.46■□□□□ 0.39
CDH11-207ENST00000563255 PI4KBQ9UBF8 816 aa17.46■□□□□ 0.39
CDH11-207ENST00000563255 ATAD5Q96QE3 1844 aa17.46■□□□□ 0.39
CDH11-207ENST00000563255 DDTLA6NHG4 134 aaPredicted RBP17.45■□□□□ 0.38
CDH11-207ENST00000563255 RGS19P49795 217 aa17.45■□□□□ 0.38
CDH11-207ENST00000563255 PDE4BQ07343 736 aa17.45■□□□□ 0.38
CDH11-207ENST00000563255 TRDNQ13061 729 aa17.45■□□□□ 0.38
CDH11-207ENST00000563255 C16orf86Q6ZW13 317 aa17.45■□□□□ 0.38
CDH11-207ENST00000563255 SH3BP5LQ7L8J4 393 aa17.45■□□□□ 0.38
CDH11-207ENST00000563255 METTL16Q86W50 562 aaKnown RBP17.45■□□□□ 0.38
CDH11-207ENST00000563255 FOXP4Q8IVH2 680 aaPredicted RBP17.45■□□□□ 0.38
CDH11-207ENST00000563255 KRT23Q9C075 422 aa17.45■□□□□ 0.38
CDH11-207ENST00000563255 ZNF287Q9HBT7 754 aa17.45■□□□□ 0.38
CDH11-207ENST00000563255 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.45■□□□□ 0.38
CDH11-207ENST00000563255 RBM19Q9Y4C8 960 aaKnown RBP17.45■□□□□ 0.38
CDH11-207ENST00000563255 GREB1LQ9C091 1923 aaPredicted RBP17.45■□□□□ 0.38
CDH11-207ENST00000563255 SMIM22K7EJ46 135 aa17.44■□□□□ 0.38
CDH11-207ENST00000563255 ORC4O43929 436 aa17.44■□□□□ 0.38
CDH11-207ENST00000563255 TRPA1O75762 1119 aa17.44■□□□□ 0.38
CDH11-207ENST00000563255 CASTP20810 708 aaKnown RBP17.44■□□□□ 0.38
CDH11-207ENST00000563255 SOX10P56693 466 aa17.44■□□□□ 0.38
CDH11-207ENST00000563255 EVX2Q03828 476 aa17.44■□□□□ 0.38
CDH11-207ENST00000563255 GABPAQ06546 454 aa17.44■□□□□ 0.38
CDH11-207ENST00000563255 BLOC1S2Q6QNY1 142 aa17.44■□□□□ 0.38
CDH11-207ENST00000563255 RUFY3Q7L099 469 aa17.44■□□□□ 0.38
CDH11-207ENST00000563255 ZSCAN29Q8IWY8 852 aaPredicted RBP17.44■□□□□ 0.38
CDH11-207ENST00000563255 SWAP70Q9UH65 585 aa17.44■□□□□ 0.38
CDH11-207ENST00000563255 SERPINB13Q9UIV8 391 aa17.44■□□□□ 0.38
CDH11-207ENST00000563255 CYP46A1Q9Y6A2 500 aa17.44■□□□□ 0.38
CDH11-207ENST00000563255 TACC3Q9Y6A5 838 aa17.44■□□□□ 0.38
CDH11-207ENST00000563255 RASA3Q14644 834 aa17.43■□□□□ 0.38
CDH11-207ENST00000563255 DHX32Q7L7V1 743 aaKnown RBP17.43■□□□□ 0.38
CDH11-207ENST00000563255 RALYLQ86SE5 291 aaKnown RBP17.43■□□□□ 0.38
CDH11-207ENST00000563255 RNF186Q9NXI6 227 aa17.43■□□□□ 0.38
CDH11-207ENST00000563255 PPP2R3BQ9Y5P8 575 aa17.43■□□□□ 0.38
CDH11-207ENST00000563255 NEDD4P46934 1319 aa17.43■□□□□ 0.38
CDH11-207ENST00000563255 WDR19Q8NEZ3 1342 aa17.43■□□□□ 0.38
CDH11-207ENST00000563255 SLC10A3P09131 477 aa17.42■□□□□ 0.38
CDH11-207ENST00000563255 RPS6KB1P23443 525 aa17.42■□□□□ 0.38
CDH11-207ENST00000563255 CDK8P49336 464 aa17.42■□□□□ 0.38
CDH11-207ENST00000563255 NEK4P51957 841 aa17.42■□□□□ 0.38
CDH11-207ENST00000563255 EXOSC10Q01780 885 aaKnown RBP17.42■□□□□ 0.38
CDH11-207ENST00000563255 SLC4A8Q2Y0W8 1093 aa17.42■□□□□ 0.38
CDH11-207ENST00000563255 MB21D2Q8IYB1 491 aaPredicted RBP17.42■□□□□ 0.38
CDH11-207ENST00000563255 ESR2Q92731 530 aa17.42■□□□□ 0.38
CDH11-207ENST00000563255 DYNLL2Q96FJ2 89 aa17.42■□□□□ 0.38
CDH11-207ENST00000563255 TEPSINQ96N21 525 aa17.42■□□□□ 0.38
CDH11-207ENST00000563255 TMEM39BQ9GZU3 492 aa17.42■□□□□ 0.38
CDH11-207ENST00000563255 DEFB129Q9H1M3 183 aa17.42■□□□□ 0.38
CDH11-207ENST00000563255 ALDH8A1Q9H2A2 487 aaPredicted RBP17.42■□□□□ 0.38
CDH11-207ENST00000563255 INCENPQ9NQS7 918 aa17.42■□□□□ 0.38
CDH11-207ENST00000563255 SCAF8Q9UPN6 1271 aaKnown RBP17.42■□□□□ 0.38
CDH11-207ENST00000563255 MYH4Q9Y623 1939 aa17.42■□□□□ 0.38
CDH11-207ENST00000563255 B4E1Z4 1266 aa17.41■□□□□ 0.38
CDH11-207ENST00000563255 TBC1D12O60347 775 aa17.41■□□□□ 0.38
CDH11-207ENST00000563255 MCM5P33992 734 aa17.41■□□□□ 0.38
CDH11-207ENST00000563255 MAP3K10Q02779 954 aa17.41■□□□□ 0.38
CDH11-207ENST00000563255 STK11IPQ8N1F8 1099 aa17.41■□□□□ 0.38
CDH11-207ENST00000563255 TTC14Q96N46 770 aa17.41■□□□□ 0.38
CDH11-207ENST00000563255 CSRNP1Q96S65 589 aa17.41■□□□□ 0.38
CDH11-207ENST00000563255 MTA3Q9BTC8 594 aa17.41■□□□□ 0.38
CDH11-207ENST00000563255 UPF3BQ9BZI7 483 aaKnown RBP17.41■□□□□ 0.38
CDH11-207ENST00000563255 MKNK2Q9HBH9 465 aa17.41■□□□□ 0.38
CDH11-207ENST00000563255 SAGE1Q9NXZ1 904 aa17.41■□□□□ 0.38
CDH11-207ENST00000563255 HERC5Q9UII4 1024 aaKnown RBP17.41■□□□□ 0.38
CDH11-207ENST00000563255 ST18O60284 1047 aa17.4■□□□□ 0.38
CDH11-207ENST00000563255 ZNF444Q8N0Y2 327 aaPredicted RBP17.4■□□□□ 0.38
CDH11-207ENST00000563255 FBXL16Q8N461 479 aa17.4■□□□□ 0.38
CDH11-207ENST00000563255 CRACR2BQ8N4Y2 399 aaPredicted RBP17.4■□□□□ 0.38
CDH11-207ENST00000563255 TOMM22Q9NS69 142 aa17.4■□□□□ 0.38
CDH11-207ENST00000563255 ZSWIM5Q9P217 1185 aa17.4■□□□□ 0.38
CDH11-207ENST00000563255 KDM4AO75164 1064 aa17.39■□□□□ 0.37
CDH11-207ENST00000563255 CPA1P15085 419 aa17.39■□□□□ 0.37
CDH11-207ENST00000563255 RASA1P20936 1047 aa17.39■□□□□ 0.37
CDH11-207ENST00000563255 FKBP1BP68106 108 aa17.39■□□□□ 0.37
CDH11-207ENST00000563255 COL9A3Q14050 684 aaPredicted RBP17.39■□□□□ 0.37
CDH11-207ENST00000563255 RRP12Q5JTH9 1297 aaKnown RBP17.39■□□□□ 0.37
CDH11-207ENST00000563255 PRAMEF18Q5VWM3 479 aa17.39■□□□□ 0.37
CDH11-207ENST00000563255 TATDN1Q6P1N9 297 aa17.39■□□□□ 0.37
CDH11-207ENST00000563255 HOOK2Q96ED9 719 aa17.39■□□□□ 0.37
CDH11-207ENST00000563255 PDRG1Q9NUG6 133 aa17.39■□□□□ 0.37
CDH11-207ENST00000563255 DOCK1Q14185 1865 aa17.38■□□□□ 0.37
CDH11-207ENST00000563255 UBE2Q2LH0YL09 131 aa17.38■□□□□ 0.37
CDH11-207ENST00000563255 PRDM1O75626 825 aa17.38■□□□□ 0.37
CDH11-207ENST00000563255 SHMT1P34896 483 aa17.38■□□□□ 0.37
CDH11-207ENST00000563255 ANTXR2P58335 489 aa17.38■□□□□ 0.37
CDH11-207ENST00000563255 MOB2Q70IA6 237 aa17.38■□□□□ 0.37
CDH11-207ENST00000563255 CYB5R4Q7L1T6 521 aa17.38■□□□□ 0.37
CDH11-207ENST00000563255 RASAL3Q86YV0 1011 aa17.38■□□□□ 0.37
CDH11-207ENST00000563255 SLC44A5Q8NCS7 719 aa17.38■□□□□ 0.37
CDH11-207ENST00000563255 NKX2-3Q8TAU0 364 aa17.38■□□□□ 0.37
CDH11-207ENST00000563255 SNX21Q969T3 373 aa17.38■□□□□ 0.37
CDH11-207ENST00000563255 TMEM87BQ96K49 555 aa17.38■□□□□ 0.37
CDH11-207ENST00000563255 TRIM34Q9BYJ4 488 aa17.38■□□□□ 0.37
CDH11-207ENST00000563255 AGXT2Q9BYV1 514 aa17.38■□□□□ 0.37
CDH11-207ENST00000563255 DNAJC18Q9H819 358 aa17.38■□□□□ 0.37
CDH11-207ENST00000563255 PDE4DIPQ5VU43 2346 aa17.38■□□□□ 0.37
CDH11-207ENST00000563255 PRC1O43663 620 aa17.37■□□□□ 0.37
CDH11-207ENST00000563255 RANBP6O60518 1105 aaKnown RBP17.37■□□□□ 0.37
CDH11-207ENST00000563255 ANP32AP39687 249 aaKnown RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms