RNA–Protein interactions for RNA: ENST00000562543.5

TCF4-213, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-213ENST00000562543 CFAP47Q6ZTR5 3102 aa8.24□□□□□ -1.09
TCF4-213ENST00000562543 DUOX1Q9NRD9 1551 aa8.24□□□□□ -1.09
TCF4-213ENST00000562543 SNRPNP63162 240 aaKnown RBP8.24□□□□□ -1.09
TCF4-213ENST00000562543 MRPS5P82675 430 aaKnown RBP8.24□□□□□ -1.09
TCF4-213ENST00000562543 KCTD2Q14681 263 aa8.24□□□□□ -1.09
TCF4-213ENST00000562543 LDLRAD1Q5T700 205 aa8.24□□□□□ -1.09
TCF4-213ENST00000562543 CYP2U1Q7Z449 544 aa8.24□□□□□ -1.09
TCF4-213ENST00000562543 SUPT20HQ8NEM7 779 aa8.24□□□□□ -1.09
TCF4-213ENST00000562543 ARHGAP39Q9C0H5 1083 aa8.24□□□□□ -1.09
TCF4-213ENST00000562543 NUCKS1Q9H1E3 243 aaKnown RBP8.24□□□□□ -1.09
TCF4-213ENST00000562543 COL3A1P02461 1466 aaPredicted RBP8.24□□□□□ -1.09
TCF4-213ENST00000562543 ABCC12Q96J65 1359 aa8.23□□□□□ -1.09
TCF4-213ENST00000562543 ST20-MTHFSA0A0A6YYL1 179 aa8.23□□□□□ -1.09
TCF4-213ENST00000562543 PHF20L1A8MW92 1017 aa8.23□□□□□ -1.09
TCF4-213ENST00000562543 MSTNO14793 375 aa8.23□□□□□ -1.09
TCF4-213ENST00000562543 TRAK2O60296 914 aa8.23□□□□□ -1.09
TCF4-213ENST00000562543 CAPN2P17655 700 aa8.23□□□□□ -1.09
TCF4-213ENST00000562543 IL6STP40189 918 aaPredicted RBP8.23□□□□□ -1.09
TCF4-213ENST00000562543 MTHFSP49914 203 aa8.23□□□□□ -1.09
TCF4-213ENST00000562543 RNF20Q5VTR2 975 aa8.23□□□□□ -1.09
TCF4-213ENST00000562543 OTUD7BQ6GQQ9 843 aa8.23□□□□□ -1.09
TCF4-213ENST00000562543 TPTE2Q6XPS3 522 aa8.23□□□□□ -1.09
TCF4-213ENST00000562543 C1orf229Q6ZS94 237 aaPredicted RBP8.23□□□□□ -1.09
TCF4-213ENST00000562543 TAS1R3Q7RTX0 852 aa8.23□□□□□ -1.09
TCF4-213ENST00000562543 PAWRQ96IZ0 340 aaKnown RBP8.23□□□□□ -1.09
TCF4-213ENST00000562543 LOC105371045A0A1W2PR82 267 aa8.22□□□□□ -1.09
TCF4-213ENST00000562543 FAM86C2PA6NEL3 165 aa8.22□□□□□ -1.09
TCF4-213ENST00000562543 SPATA31C2B4DYI2 1134 aa8.22□□□□□ -1.09
TCF4-213ENST00000562543 GNRH1P01148 92 aa8.22□□□□□ -1.09
TCF4-213ENST00000562543 IL2RAP01589 272 aa8.22□□□□□ -1.09
TCF4-213ENST00000562543 F11P03951 625 aa8.22□□□□□ -1.09
TCF4-213ENST00000562543 GRK4P32298 578 aa8.22□□□□□ -1.09
TCF4-213ENST00000562543 CENPCQ03188 943 aa8.22□□□□□ -1.09
TCF4-213ENST00000562543 NR1H3Q13133 447 aa8.22□□□□□ -1.09
TCF4-213ENST00000562543 PRAMEF18Q5VWM3 479 aa8.22□□□□□ -1.09
TCF4-213ENST00000562543 ZNF530Q6P9A1 599 aaPredicted RBP8.22□□□□□ -1.09
TCF4-213ENST00000562543 WNK4Q96J92 1243 aa8.22□□□□□ -1.09
TCF4-213ENST00000562543 PTPN18Q99952 460 aa8.22□□□□□ -1.09
TCF4-213ENST00000562543 GOPCQ9HD26 462 aa8.22□□□□□ -1.09
TCF4-213ENST00000562543 KIF20BQ96Q89 1820 aa8.22□□□□□ -1.09
TCF4-213ENST00000562543 DDX60LQ5H9U9 1706 aaKnown RBP8.21□□□□□ -1.09
TCF4-213ENST00000562543 CHD6Q8TD26 2715 aa8.21□□□□□ -1.09
TCF4-213ENST00000562543 SMIM22K7EJ46 135 aa8.21□□□□□ -1.1
TCF4-213ENST00000562543 TCERG1O14776 1098 aaKnown RBP8.21□□□□□ -1.1
TCF4-213ENST00000562543 OIP5O43482 229 aa8.21□□□□□ -1.1
TCF4-213ENST00000562543 STAU1O95793 577 aaKnown RBP8.21□□□□□ -1.1
TCF4-213ENST00000562543 LACTBP83111 547 aaPredicted RBP8.21□□□□□ -1.1
TCF4-213ENST00000562543 SLC39A6Q13433 755 aa8.21□□□□□ -1.1
TCF4-213ENST00000562543 CLEC4GQ6UXB4 293 aa8.21□□□□□ -1.1
TCF4-213ENST00000562543 PODNQ7Z5L7 613 aa8.21□□□□□ -1.1
TCF4-213ENST00000562543 NECAB2Q7Z6G3 386 aa8.21□□□□□ -1.1
TCF4-213ENST00000562543 DIS3LQ8TF46 1054 aaKnown RBP8.21□□□□□ -1.1
TCF4-213ENST00000562543 CRAMP1Q96RY5 1269 aa8.21□□□□□ -1.1
TCF4-213ENST00000562543 SCAF8Q9UPN6 1271 aaKnown RBP8.21□□□□□ -1.1
TCF4-213ENST00000562543 ZNF330Q9Y3S2 320 aaPredicted RBP8.21□□□□□ -1.1
TCF4-213ENST00000562543 RTL9Q8NET4 1388 aa8.21□□□□□ -1.1
TCF4-213ENST00000562543 SCN9AQ15858 1988 aa8.21□□□□□ -1.1
TCF4-213ENST00000562543 REV3LO60673 3130 aa8.2□□□□□ -1.1
TCF4-213ENST00000562543 SHISA8B8ZZ34 492 aa8.2□□□□□ -1.1
TCF4-213ENST00000562543 STARD3NLO95772 234 aa8.2□□□□□ -1.1
TCF4-213ENST00000562543 PROCP04070 461 aa8.2□□□□□ -1.1
TCF4-213ENST00000562543 UBXN2AP68543 259 aa8.2□□□□□ -1.1
TCF4-213ENST00000562543 TSGA10IPQ3SY00 556 aa8.2□□□□□ -1.1
TCF4-213ENST00000562543 ARMC9Q7Z3E5 817 aa8.2□□□□□ -1.1
TCF4-213ENST00000562543 RPGRQ92834 1020 aaKnown RBP8.2□□□□□ -1.1
TCF4-213ENST00000562543 OXCT2Q9BYC2 517 aaPredicted RBP8.2□□□□□ -1.1
TCF4-213ENST00000562543 ATP6V0A2Q9Y487 856 aa8.2□□□□□ -1.1
TCF4-213ENST00000562543 RIPOR2Q9Y4F9 1068 aa8.2□□□□□ -1.1
TCF4-213ENST00000562543 ADAM23O75077 832 aa8.19□□□□□ -1.1
TCF4-213ENST00000562543 NF2P35240 595 aa8.19□□□□□ -1.1
TCF4-213ENST00000562543 NEUROD2Q15784 382 aa8.19□□□□□ -1.1
TCF4-213ENST00000562543 PLEKHO1Q53GL0 409 aaPredicted RBP8.19□□□□□ -1.1
TCF4-213ENST00000562543 ERMP1Q7Z2K6 904 aa8.19□□□□□ -1.1
TCF4-213ENST00000562543 MTMR14Q8NCE2 650 aa8.19□□□□□ -1.1
TCF4-213ENST00000562543 ZNF496Q96IT1 587 aaPredicted RBP8.19□□□□□ -1.1
TCF4-213ENST00000562543 FBXL18Q96ME1 805 aa8.19□□□□□ -1.1
TCF4-213ENST00000562543 CCDC85AQ96PX6 553 aaPredicted RBP8.19□□□□□ -1.1
TCF4-213ENST00000562543 ESYT1Q9BSJ8 1104 aa8.19□□□□□ -1.1
TCF4-213ENST00000562543 KCNH6Q9H252 994 aa8.19□□□□□ -1.1
TCF4-213ENST00000562543 SLC52A2Q9HAB3 445 aa8.19□□□□□ -1.1
TCF4-213ENST00000562543 SNRKQ9NRH2 765 aa8.19□□□□□ -1.1
TCF4-213ENST00000562543 SRRDQ9UH36 339 aa8.19□□□□□ -1.1
TCF4-213ENST00000562543 PSME4Q14997 1843 aa8.19□□□□□ -1.1
TCF4-213ENST00000562543 SETXQ7Z333 2677 aaKnown RBP8.18□□□□□ -1.1
TCF4-213ENST00000562543 LRRC37AA6NMS7 1700 aa8.18□□□□□ -1.1
TCF4-213ENST00000562543 LTBP2Q14767 1821 aa8.18□□□□□ -1.1
TCF4-213ENST00000562543 FYB1O15117 783 aa8.18□□□□□ -1.1
TCF4-213ENST00000562543 ITGB8P26012 769 aa8.18□□□□□ -1.1
TCF4-213ENST00000562543 ZNF280AP59817 542 aaPredicted RBP8.18□□□□□ -1.1
TCF4-213ENST00000562543 WDR44Q5JSH3 913 aa8.18□□□□□ -1.1
TCF4-213ENST00000562543 DPP8Q6V1X1 898 aaPredicted RBP8.18□□□□□ -1.1
TCF4-213ENST00000562543 GALNT6Q8NCL4 622 aa8.18□□□□□ -1.1
TCF4-213ENST00000562543 GGNBP2Q9H3C7 697 aa8.18□□□□□ -1.1
TCF4-213ENST00000562543 RUBCNLQ9H714 662 aa8.18□□□□□ -1.1
TCF4-213ENST00000562543 ZFYVE28Q9HCC9 887 aa8.18□□□□□ -1.1
TCF4-213ENST00000562543 MYO15AQ9UKN7 3530 aa8.18□□□□□ -1.1
TCF4-213ENST00000562543 ZNF318Q5VUA4 2279 aa8.18□□□□□ -1.1
TCF4-213ENST00000562543 KRBA1A5PL33 1030 aa8.17□□□□□ -1.1
TCF4-213ENST00000562543 PRR33A8MZF0 331 aa8.17□□□□□ -1.1
TCF4-213ENST00000562543 TFRCP02786 760 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms