RNA–Protein interactions for RNA: ENST00000561517.5

CCDC113-203, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-203ENST00000561517 POLR3DP05423 398 aaPredicted RBP18.67■□□□□ 0.58
CCDC113-203ENST00000561517 GABPAQ06546 454 aa18.67■□□□□ 0.58
CCDC113-203ENST00000561517 SH3D19Q5HYK7 790 aa18.67■□□□□ 0.58
CCDC113-203ENST00000561517 ANKRD45Q5TZF3 282 aa18.67■□□□□ 0.58
CCDC113-203ENST00000561517 PROCA1Q8NCQ7 364 aaPredicted RBP18.67■□□□□ 0.58
CCDC113-203ENST00000561517 PARK7Q99497 189 aaKnown RBP18.67■□□□□ 0.58
CCDC113-203ENST00000561517 EFCC1Q9HA90 598 aa18.67■□□□□ 0.58
CCDC113-203ENST00000561517 ATP8A2Q9NTI2 1148 aa18.67■□□□□ 0.58
CCDC113-203ENST00000561517 MCM9Q9NXL9 1143 aa18.67■□□□□ 0.58
CCDC113-203ENST00000561517 ZBTB21Q9ULJ3 1066 aa18.67■□□□□ 0.58
CCDC113-203ENST00000561517 AGTPBP1Q9UPW5 1226 aa18.67■□□□□ 0.58
CCDC113-203ENST00000561517 HPS5Q9UPZ3 1129 aa18.67■□□□□ 0.58
CCDC113-203ENST00000561517 DOCK3Q8IZD9 2030 aa18.66■□□□□ 0.58
CCDC113-203ENST00000561517 PRKAB2O43741 272 aa18.66■□□□□ 0.58
CCDC113-203ENST00000561517 MX1P20591 662 aa18.66■□□□□ 0.58
CCDC113-203ENST00000561517 SHROOM1Q2M3G4 852 aaPredicted RBP18.66■□□□□ 0.58
CCDC113-203ENST00000561517 PUS7LQ9H0K6 701 aaKnown RBP18.66■□□□□ 0.58
CCDC113-203ENST00000561517 KIAA0100Q14667 2235 aaKnown RBP18.66■□□□□ 0.58
CCDC113-203ENST00000561517 CYP2C8P10632 490 aa18.65■□□□□ 0.58
CCDC113-203ENST00000561517 SHMT1P34896 483 aa18.65■□□□□ 0.58
CCDC113-203ENST00000561517 LACTBP83111 547 aaPredicted RBP18.65■□□□□ 0.58
CCDC113-203ENST00000561517 ARHGEF6Q15052 776 aa18.65■□□□□ 0.58
CCDC113-203ENST00000561517 SMC5Q8IY18 1101 aa18.65■□□□□ 0.58
CCDC113-203ENST00000561517 RWDD1Q9H446 243 aaPredicted RBP18.65■□□□□ 0.58
CCDC113-203ENST00000561517 ZBTB47Q9UFB7 747 aaPredicted RBP18.65■□□□□ 0.58
CCDC113-203ENST00000561517 CPA4Q9UI42 421 aa18.65■□□□□ 0.58
CCDC113-203ENST00000561517 TAOK2Q9UL54 1235 aa18.65■□□□□ 0.58
CCDC113-203ENST00000561517 RNF113AO15541 343 aaKnown RBP18.64■□□□□ 0.57
CCDC113-203ENST00000561517 GH2P01242 217 aa18.64■□□□□ 0.57
CCDC113-203ENST00000561517 ZFYP08048 801 aaPredicted RBP18.64■□□□□ 0.57
CCDC113-203ENST00000561517 BCRP11274 1271 aa18.64■□□□□ 0.57
CCDC113-203ENST00000561517 HMGCS2P54868 508 aa18.64■□□□□ 0.57
CCDC113-203ENST00000561517 BACE1P56817 501 aa18.64■□□□□ 0.57
CCDC113-203ENST00000561517 EVX2Q03828 476 aa18.64■□□□□ 0.57
CCDC113-203ENST00000561517 TREML2Q5T2D2 321 aa18.64■□□□□ 0.57
CCDC113-203ENST00000561517 APPBP2Q92624 585 aa18.64■□□□□ 0.57
CCDC113-203ENST00000561517 STAP2Q9UGK3 403 aa18.64■□□□□ 0.57
CCDC113-203ENST00000561517 PTPN22Q9Y2R2 807 aa18.64■□□□□ 0.57
CCDC113-203ENST00000561517 C19orf81C9J6K1 198 aa18.63■□□□□ 0.57
CCDC113-203ENST00000561517 KIF22Q14807 665 aa18.63■□□□□ 0.57
CCDC113-203ENST00000561517 CERKLQ49MI3 558 aaPredicted RBP18.63■□□□□ 0.57
CCDC113-203ENST00000561517 OSBP2Q969R2 916 aa18.63■□□□□ 0.57
CCDC113-203ENST00000561517 STRBPQ96SI9 672 aaKnown RBP18.63■□□□□ 0.57
CCDC113-203ENST00000561517 SLC4A4Q9Y6R1 1079 aa18.63■□□□□ 0.57
CCDC113-203ENST00000561517 USP17L10C9JJH3 530 aa18.62■□□□□ 0.57
CCDC113-203ENST00000561517 IGHDP01880 384 aa18.62■□□□□ 0.57
CCDC113-203ENST00000561517 CYP2D6P10635 497 aa18.62■□□□□ 0.57
CCDC113-203ENST00000561517 MTMR2Q13614 643 aa18.62■□□□□ 0.57
CCDC113-203ENST00000561517 LRRFIP1Q32MZ4 808 aaKnown RBP18.62■□□□□ 0.57
CCDC113-203ENST00000561517 ARHGAP39Q9C0H5 1083 aa18.62■□□□□ 0.57
CCDC113-203ENST00000561517 GNRH1P01148 92 aa18.61■□□□□ 0.57
CCDC113-203ENST00000561517 RGS19P49795 217 aa18.61■□□□□ 0.57
CCDC113-203ENST00000561517 PDE1AP54750 535 aa18.61■□□□□ 0.57
CCDC113-203ENST00000561517 ABCB5Q2M3G0 1257 aa18.61■□□□□ 0.57
CCDC113-203ENST00000561517 C12orf60Q5U649 245 aa18.61■□□□□ 0.57
CCDC113-203ENST00000561517 SWAP70Q9UH65 585 aa18.61■□□□□ 0.57
CCDC113-203ENST00000561517 PNMA3Q9UL41 463 aa18.61■□□□□ 0.57
CCDC113-203ENST00000561517 USP17L12C9JPN9 530 aa18.6■□□□□ 0.57
CCDC113-203ENST00000561517 USP17L21D6R901 530 aa18.6■□□□□ 0.57
CCDC113-203ENST00000561517 CTGFP29279 349 aa18.6■□□□□ 0.57
CCDC113-203ENST00000561517 PABPC4Q13310 644 aaKnown RBP eCLIP18.6■□□□□ 0.57
CCDC113-203ENST00000561517 DDRGK1Q96HY6 314 aa18.6■□□□□ 0.57
CCDC113-203ENST00000561517 CABP5Q9NP86 173 aa18.6■□□□□ 0.57
CCDC113-203ENST00000561517 TMOD4Q9NZQ9 345 aa18.6■□□□□ 0.57
CCDC113-203ENST00000561517 HTTP42858 3142 aa18.59■□□□□ 0.57
CCDC113-203ENST00000561517 GSG1L2A8MUP6 293 aa18.59■□□□□ 0.57
CCDC113-203ENST00000561517 HOXA7P31268 230 aaPredicted RBP18.59■□□□□ 0.57
CCDC113-203ENST00000561517 GUCY1A2P33402 732 aa18.59■□□□□ 0.57
CCDC113-203ENST00000561517 GIMAP6Q6P9H5 292 aa18.59■□□□□ 0.57
CCDC113-203ENST00000561517 CTR9Q6PD62 1173 aa18.59■□□□□ 0.57
CCDC113-203ENST00000561517 AMOTL1Q8IY63 956 aa18.59■□□□□ 0.57
CCDC113-203ENST00000561517 SLC44A5Q8NCS7 719 aa18.59■□□□□ 0.57
CCDC113-203ENST00000561517 SMCR8Q8TEV9 937 aaPredicted RBP18.59■□□□□ 0.57
CCDC113-203ENST00000561517 DYNLL2Q96FJ2 89 aa18.59■□□□□ 0.57
CCDC113-203ENST00000561517 TRIM47Q96LD4 638 aa18.59■□□□□ 0.57
CCDC113-203ENST00000561517 FSD1Q9BTV5 496 aa18.59■□□□□ 0.57
CCDC113-203ENST00000561517 LNPKQ9C0E8 428 aa18.59■□□□□ 0.57
CCDC113-203ENST00000561517 ASCC2Q9H1I8 757 aaPredicted RBP18.59■□□□□ 0.57
CCDC113-203ENST00000561517 CYP2D7A0A087X1C5 515 aa18.58■□□□□ 0.56
CCDC113-203ENST00000561517 SMIM22K7EJ46 135 aa18.58■□□□□ 0.56
CCDC113-203ENST00000561517 M0R2C6 588 aa18.58■□□□□ 0.56
CCDC113-203ENST00000561517 GPAA1O43292 621 aa18.58■□□□□ 0.56
CCDC113-203ENST00000561517 OSBPP22059 807 aa18.58■□□□□ 0.56
CCDC113-203ENST00000561517 PSMC4P43686 418 aa18.58■□□□□ 0.56
CCDC113-203ENST00000561517 PRMT2P55345 433 aa18.58■□□□□ 0.56
CCDC113-203ENST00000561517 RAB3GAP1Q15042 981 aa18.58■□□□□ 0.56
CCDC113-203ENST00000561517 SBK1Q52WX2 424 aa18.58■□□□□ 0.56
CCDC113-203ENST00000561517 ZMYM1Q5SVZ6 1142 aa18.58■□□□□ 0.56
CCDC113-203ENST00000561517 USP17L2Q6R6M4 530 aa18.58■□□□□ 0.56
CCDC113-203ENST00000561517 C16orf86Q6ZW13 317 aa18.58■□□□□ 0.56
CCDC113-203ENST00000561517 C12orf42Q96LP6 360 aa18.58■□□□□ 0.56
CCDC113-203ENST00000561517 EMILIN3Q9NT22 766 aa18.58■□□□□ 0.56
CCDC113-203ENST00000561517 ARPP21Q9UBL0 812 aaPredicted RBP18.58■□□□□ 0.56
CCDC113-203ENST00000561517 GNAT2P19087 354 aa18.57■□□□□ 0.56
CCDC113-203ENST00000561517 GCLCP48506 637 aaPredicted RBP18.57■□□□□ 0.56
CCDC113-203ENST00000561517 CDK8P49336 464 aa18.57■□□□□ 0.56
CCDC113-203ENST00000561517 NUCB1Q02818 461 aa18.57■□□□□ 0.56
CCDC113-203ENST00000561517 SEPT2Q15019 361 aa18.57■□□□□ 0.56
CCDC113-203ENST00000561517 ARMC5Q96C12 935 aa18.57■□□□□ 0.56
CCDC113-203ENST00000561517 KIAA1683Q9H0B3 1180 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms