RNA–Protein interactions for RNA: ENST00000561397.1

AP4E1-206, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 1,233 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-206ENST00000561397 SMYD4Q8IYR2 804 aaPredicted RBP7.59□□□□□ -1.19
AP4E1-206ENST00000561397 ZNF507Q8TCN5 953 aa7.59□□□□□ -1.19
AP4E1-206ENST00000561397 SHDQ96IW2 340 aa7.59□□□□□ -1.19
AP4E1-206ENST00000561397 KCNF1Q9H3M0 494 aa7.59□□□□□ -1.19
AP4E1-206ENST00000561397 TJP2Q9UDY2 1190 aa7.59□□□□□ -1.19
AP4E1-206ENST00000561397 GAS2O43903 313 aaKnown RBP7.58□□□□□ -1.2
AP4E1-206ENST00000561397 PGRP06401 933 aa7.58□□□□□ -1.2
AP4E1-206ENST00000561397 PLCG1P19174 1290 aa7.58□□□□□ -1.2
AP4E1-206ENST00000561397 NKG7Q16617 165 aa7.58□□□□□ -1.2
AP4E1-206ENST00000561397 MCATQ8IVS2 390 aaKnown RBP7.58□□□□□ -1.2
AP4E1-206ENST00000561397 FBLIM1Q8WUP2 373 aa7.58□□□□□ -1.2
AP4E1-206ENST00000561397 DBNDD2Q9BQY9 259 aa7.58□□□□□ -1.2
AP4E1-206ENST00000561397 PIDD1Q9HB75 910 aa7.58□□□□□ -1.2
AP4E1-206ENST00000561397 SLC22A31A6NKX4 558 aa7.57□□□□□ -1.2
AP4E1-206ENST00000561397 IMPDH2P12268 514 aa7.57□□□□□ -1.2
AP4E1-206ENST00000561397 MAP4P27816 1152 aaKnown RBP7.57□□□□□ -1.2
AP4E1-206ENST00000561397 GIPRP48546 466 aa7.57□□□□□ -1.2
AP4E1-206ENST00000561397 USP11P51784 963 aa7.57□□□□□ -1.2
AP4E1-206ENST00000561397 ETF1P62495 437 aaKnown RBP7.57□□□□□ -1.2
AP4E1-206ENST00000561397 SF3A1Q15459 793 aaKnown RBP7.57□□□□□ -1.2
AP4E1-206ENST00000561397 HID1Q8IV36 788 aa7.57□□□□□ -1.2
AP4E1-206ENST00000561397 SHISA5Q8N114 240 aa7.57□□□□□ -1.2
AP4E1-206ENST00000561397 KCT2Q8NC54 265 aa7.57□□□□□ -1.2
AP4E1-206ENST00000561397 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.57□□□□□ -1.2
AP4E1-206ENST00000561397 SRRTQ9BXP5 876 aaKnown RBP7.57□□□□□ -1.2
AP4E1-206ENST00000561397 PCOLCE2Q9UKZ9 415 aa7.57□□□□□ -1.2
AP4E1-206ENST00000561397 KIAA1324LA8MWY0 1029 aaPredicted RBP7.56□□□□□ -1.2
AP4E1-206ENST00000561397 DYNC1LI2O43237 492 aaPredicted RBP7.56□□□□□ -1.2
AP4E1-206ENST00000561397 NFICP08651 508 aa7.56□□□□□ -1.2
AP4E1-206ENST00000561397 RAB6AP20340 208 aa7.56□□□□□ -1.2
AP4E1-206ENST00000561397 SLC6A19Q695T7 634 aa7.56□□□□□ -1.2
AP4E1-206ENST00000561397 CCDC81Q6ZN84 652 aa7.56□□□□□ -1.2
AP4E1-206ENST00000561397 SLFN12Q8IYM2 578 aa7.56□□□□□ -1.2
AP4E1-206ENST00000561397 SHKBP1Q8TBC3 707 aa7.56□□□□□ -1.2
AP4E1-206ENST00000561397 ARMC5Q96C12 935 aa7.56□□□□□ -1.2
AP4E1-206ENST00000561397 TMEM87BQ96K49 555 aa7.56□□□□□ -1.2
AP4E1-206ENST00000561397 TANGO6Q9C0B7 1094 aa7.56□□□□□ -1.2
AP4E1-206ENST00000561397 ANTXR1Q9H6X2 564 aa7.56□□□□□ -1.2
AP4E1-206ENST00000561397 C1GALT1Q9NS00 363 aa7.56□□□□□ -1.2
AP4E1-206ENST00000561397 GMIPQ9P107 970 aa7.56□□□□□ -1.2
AP4E1-206ENST00000561397 ADAMTS4O75173 837 aa7.55□□□□□ -1.2
AP4E1-206ENST00000561397 CST3P01034 146 aaPredicted RBP7.55□□□□□ -1.2
AP4E1-206ENST00000561397 CDCP2Q5VXM1 449 aa7.55□□□□□ -1.2
AP4E1-206ENST00000561397 LSRQ86X29 649 aaPredicted RBP7.55□□□□□ -1.2
AP4E1-206ENST00000561397 TMEM40Q8WWA1 233 aa7.55□□□□□ -1.2
AP4E1-206ENST00000561397 FERD3LQ96RJ6 166 aa7.55□□□□□ -1.2
AP4E1-206ENST00000561397 YIPF2Q9BWQ6 316 aa7.55□□□□□ -1.2
AP4E1-206ENST00000561397 PICK1Q9NRD5 415 aa7.55□□□□□ -1.2
AP4E1-206ENST00000561397 FAM95CA0A1B0GW59 222 aa7.54□□□□□ -1.2
AP4E1-206ENST00000561397 UPK3BL1B0FP48 263 aa7.54□□□□□ -1.2
AP4E1-206ENST00000561397 CHURC1-FNTBB4DL54 471 aa7.54□□□□□ -1.2
AP4E1-206ENST00000561397 UPK3BL2E5RIL1 263 aa7.54□□□□□ -1.2
AP4E1-206ENST00000561397 RNGTTO60942 597 aaKnown RBP7.54□□□□□ -1.2
AP4E1-206ENST00000561397 COBLO75128 1261 aa7.54□□□□□ -1.2
AP4E1-206ENST00000561397 LRIG2O94898 1065 aa7.54□□□□□ -1.2
AP4E1-206ENST00000561397 MAP7Q14244 749 aa7.54□□□□□ -1.2
AP4E1-206ENST00000561397 LRRFIP1Q32MZ4 808 aaKnown RBP7.54□□□□□ -1.2
AP4E1-206ENST00000561397 OVOS1Q6IE37 1185 aa7.54□□□□□ -1.2
AP4E1-206ENST00000561397 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.54□□□□□ -1.2
AP4E1-206ENST00000561397 TAB3Q8N5C8 712 aaPredicted RBP7.54□□□□□ -1.2
AP4E1-206ENST00000561397 FAM169BQ8N8A8 192 aa7.54□□□□□ -1.2
AP4E1-206ENST00000561397 GATA6Q92908 595 aa7.54□□□□□ -1.2
AP4E1-206ENST00000561397 ATG4CQ96DT6 458 aa7.54□□□□□ -1.2
AP4E1-206ENST00000561397 DRC1Q96MC2 740 aa7.54□□□□□ -1.2
AP4E1-206ENST00000561397 CNNM2Q9H8M5 875 aa7.54□□□□□ -1.2
AP4E1-206ENST00000561397 DAGLAQ9Y4D2 1042 aa7.54□□□□□ -1.2
AP4E1-206ENST00000561397 TNFRSF10CO14798 259 aa7.53□□□□□ -1.2
AP4E1-206ENST00000561397 SPINK2P20155 84 aa7.53□□□□□ -1.2
AP4E1-206ENST00000561397 RXRBP28702 533 aa7.53□□□□□ -1.2
AP4E1-206ENST00000561397 EIF6P56537 245 aaKnown RBP7.53□□□□□ -1.2
AP4E1-206ENST00000561397 PRAMEF13Q5VWM6 474 aa7.53□□□□□ -1.2
AP4E1-206ENST00000561397 CDC37L1Q7L3B6 337 aa7.53□□□□□ -1.2
AP4E1-206ENST00000561397 ARMCX6Q7L4S7 300 aa7.53□□□□□ -1.2
AP4E1-206ENST00000561397 OR6P1Q8NGX9 317 aa7.53□□□□□ -1.2
AP4E1-206ENST00000561397 MFSD14AQ96MC6 490 aa7.53□□□□□ -1.2
AP4E1-206ENST00000561397 FOXQ1Q9C009 403 aa7.53□□□□□ -1.2
AP4E1-206ENST00000561397 ZNF408Q9H9D4 720 aa7.53□□□□□ -1.2
AP4E1-206ENST00000561397 WDR64B1ANS9 1081 aa7.52□□□□□ -1.21
AP4E1-206ENST00000561397 F13BP05160 661 aa7.52□□□□□ -1.21
AP4E1-206ENST00000561397 SSBP05455 408 aaKnown RBP eCLIP7.52□□□□□ -1.21
AP4E1-206ENST00000561397 NME1P15531 152 aaKnown RBP7.52□□□□□ -1.21
AP4E1-206ENST00000561397 ATP2B1P20020 1258 aa7.52□□□□□ -1.21
AP4E1-206ENST00000561397 ETFBP38117 255 aa7.52□□□□□ -1.21
AP4E1-206ENST00000561397 RBL2Q08999 1139 aa7.52□□□□□ -1.21
AP4E1-206ENST00000561397 INTS3Q68E01 1043 aaKnown RBP7.52□□□□□ -1.21
AP4E1-206ENST00000561397 FAM13CQ8NE31 585 aa7.52□□□□□ -1.21
AP4E1-206ENST00000561397 COL17A1Q9UMD9 1497 aaPredicted RBP7.51□□□□□ -1.21
AP4E1-206ENST00000561397 ACRP10323 421 aa7.51□□□□□ -1.21
AP4E1-206ENST00000561397 HOXA10P31260 410 aaPredicted RBP7.51□□□□□ -1.21
AP4E1-206ENST00000561397 ADMP35318 185 aa7.51□□□□□ -1.21
AP4E1-206ENST00000561397 GRIK1P39086 918 aa7.51□□□□□ -1.21
AP4E1-206ENST00000561397 MLECQ14165 292 aa7.51□□□□□ -1.21
AP4E1-206ENST00000561397 NLRC3Q7RTR2 1065 aa7.51□□□□□ -1.21
AP4E1-206ENST00000561397 C19orf47Q8N9M1 422 aaKnown RBP7.51□□□□□ -1.21
AP4E1-206ENST00000561397 MFSD2AQ8NA29 543 aa7.51□□□□□ -1.21
AP4E1-206ENST00000561397 PPP1R13LQ8WUF5 828 aa7.51□□□□□ -1.21
AP4E1-206ENST00000561397 TM9SF2Q99805 663 aa7.51□□□□□ -1.21
AP4E1-206ENST00000561397 KLHL3Q9UH77 587 aa7.51□□□□□ -1.21
AP4E1-206ENST00000561397 MRVI1Q9Y6F6 885 aa7.51□□□□□ -1.21
AP4E1-206ENST00000561397 SLITRK5O94991 958 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms