RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 GYS2P54840 703 aa15.94■□□□□ 0.14
RABGGTA-220ENST00000560998 MAP3K9P80192 1104 aa15.94■□□□□ 0.14
RABGGTA-220ENST00000560998 SWT1Q5T5J6 900 aaKnown RBP15.94■□□□□ 0.14
RABGGTA-220ENST00000560998 OTUD7BQ6GQQ9 843 aa15.94■□□□□ 0.14
RABGGTA-220ENST00000560998 PTF1AQ7RTS3 328 aa15.94■□□□□ 0.14
RABGGTA-220ENST00000560998 LCORLQ8N3X6 602 aa15.94■□□□□ 0.14
RABGGTA-220ENST00000560998 IGDCC4Q8TDY8 1250 aa15.94■□□□□ 0.14
RABGGTA-220ENST00000560998 CCDC34Q96HJ3 373 aa15.94■□□□□ 0.14
RABGGTA-220ENST00000560998 CTDSPL2Q05D32 466 aa15.93■□□□□ 0.14
RABGGTA-220ENST00000560998 ZRSR1Q15695 479 aaKnown RBP15.93■□□□□ 0.14
RABGGTA-220ENST00000560998 SLC10A5Q5PT55 438 aa15.93■□□□□ 0.14
RABGGTA-220ENST00000560998 APOA5Q6Q788 366 aa15.93■□□□□ 0.14
RABGGTA-220ENST00000560998 TMX1Q9H3N1 280 aa15.93■□□□□ 0.14
RABGGTA-220ENST00000560998 SENP2Q9HC62 589 aa15.93■□□□□ 0.14
RABGGTA-220ENST00000560998 INCENPQ9NQS7 918 aa15.93■□□□□ 0.14
RABGGTA-220ENST00000560998 BSDC1Q9NW68 430 aaPredicted RBP15.93■□□□□ 0.14
RABGGTA-220ENST00000560998 BTAF1O14981 1849 aa15.93■□□□□ 0.14
RABGGTA-220ENST00000560998 CBFA2T2O43439 604 aa15.93■□□□□ 0.14
RABGGTA-220ENST00000560998 PRKAB2O43741 272 aa15.93■□□□□ 0.14
RABGGTA-220ENST00000560998 METAP2P50579 478 aaKnown RBP eCLIP15.93■□□□□ 0.14
RABGGTA-220ENST00000560998 CORO7P57737 925 aa15.93■□□□□ 0.14
RABGGTA-220ENST00000560998 PPP2R3AQ06190 1150 aa15.93■□□□□ 0.14
RABGGTA-220ENST00000560998 UBE4AQ14139 1066 aa15.93■□□□□ 0.14
RABGGTA-220ENST00000560998 LONRF2Q1L5Z9 754 aa15.93■□□□□ 0.14
RABGGTA-220ENST00000560998 TBC1D9BQ66K14 1250 aa15.93■□□□□ 0.14
RABGGTA-220ENST00000560998 GOLPH3LQ9H4A5 285 aa15.93■□□□□ 0.14
RABGGTA-220ENST00000560998 LY9Q9HBG7 655 aa15.93■□□□□ 0.14
RABGGTA-220ENST00000560998 RTEL1Q9NZ71 1219 aa15.93■□□□□ 0.14
RABGGTA-220ENST00000560998 IFNKQ9P0W0 207 aa15.93■□□□□ 0.14
RABGGTA-220ENST00000560998 LRP2BPQ9P2M1 347 aa15.93■□□□□ 0.14
RABGGTA-220ENST00000560998 MRFAP1Q9Y605 127 aa15.93■□□□□ 0.14
RABGGTA-220ENST00000560998 TACC3Q9Y6A5 838 aa15.93■□□□□ 0.14
RABGGTA-220ENST00000560998 MYO1BO43795 1136 aa15.92■□□□□ 0.14
RABGGTA-220ENST00000560998 TXLNAP40222 546 aa15.92■□□□□ 0.14
RABGGTA-220ENST00000560998 AKNAD1Q5T1N1 836 aa15.92■□□□□ 0.14
RABGGTA-220ENST00000560998 RC3H1Q5TC82 1133 aaKnown RBP15.92■□□□□ 0.14
RABGGTA-220ENST00000560998 BICDL1Q6ZP65 573 aa15.92■□□□□ 0.14
RABGGTA-220ENST00000560998 SMIM5Q71RC9 77 aa15.92■□□□□ 0.14
RABGGTA-220ENST00000560998 CCDC91Q7Z6B0 441 aa15.92■□□□□ 0.14
RABGGTA-220ENST00000560998 PACS2Q86VP3 889 aa15.92■□□□□ 0.14
RABGGTA-220ENST00000560998 SGMS1Q86VZ5 419 aa15.92■□□□□ 0.14
RABGGTA-220ENST00000560998 PARD6BQ9BYG5 372 aa15.92■□□□□ 0.14
RABGGTA-220ENST00000560998 NACAP1Q9BZK3 213 aa15.92■□□□□ 0.14
RABGGTA-220ENST00000560998 FAM107BQ9H098 131 aa15.92■□□□□ 0.14
RABGGTA-220ENST00000560998 CNNM2Q9H8M5 875 aa15.92■□□□□ 0.14
RABGGTA-220ENST00000560998 SLC4A4Q9Y6R1 1079 aa15.92■□□□□ 0.14
RABGGTA-220ENST00000560998 COL24A1Q17RW2 1714 aa15.92■□□□□ 0.14
RABGGTA-220ENST00000560998 ECM29Q5VYK3 1845 aa15.92■□□□□ 0.14
RABGGTA-220ENST00000560998 EIF3CLB5ME19 914 aaKnown RBP15.91■□□□□ 0.14
RABGGTA-220ENST00000560998 CDKL5O76039 1030 aa15.91■□□□□ 0.14
RABGGTA-220ENST00000560998 GYG1P46976 350 aa15.91■□□□□ 0.14
RABGGTA-220ENST00000560998 TMEM67Q5HYA8 995 aa15.91■□□□□ 0.14
RABGGTA-220ENST00000560998 BRAPQ7Z569 592 aa15.91■□□□□ 0.14
RABGGTA-220ENST00000560998 EFCAB13Q8IY85 973 aa15.91■□□□□ 0.14
RABGGTA-220ENST00000560998 EIF3CQ99613 913 aaKnown RBP15.91■□□□□ 0.14
RABGGTA-220ENST00000560998 GNL3LQ9NVN8 582 aaKnown RBP15.91■□□□□ 0.14
RABGGTA-220ENST00000560998 NARFQ9UHQ1 456 aa15.91■□□□□ 0.14
RABGGTA-220ENST00000560998 IQSEC3Q9UPP2 1182 aaPredicted RBP15.91■□□□□ 0.14
RABGGTA-220ENST00000560998 COL1A1P02452 1464 aaPredicted RBP15.91■□□□□ 0.14
RABGGTA-220ENST00000560998 H3BQF6 201 aa15.91■□□□□ 0.14
RABGGTA-220ENST00000560998 IKBKBO14920 756 aa15.91■□□□□ 0.14
RABGGTA-220ENST00000560998 ZBTB43O43298 467 aa15.91■□□□□ 0.14
RABGGTA-220ENST00000560998 RPS6KA4O75676 772 aa15.91■□□□□ 0.14
RABGGTA-220ENST00000560998 LIFRP42702 1097 aa15.91■□□□□ 0.14
RABGGTA-220ENST00000560998 TDO2P48775 406 aa15.91■□□□□ 0.14
RABGGTA-220ENST00000560998 HDXQ7Z353 690 aa15.91■□□□□ 0.14
RABGGTA-220ENST00000560998 FNBP4Q8N3X1 1017 aaPredicted RBP15.91■□□□□ 0.14
RABGGTA-220ENST00000560998 STAG1Q8WVM7 1258 aa15.91■□□□□ 0.14
RABGGTA-220ENST00000560998 ZBTB9Q96C00 473 aa15.91■□□□□ 0.14
RABGGTA-220ENST00000560998 KRT23Q9C075 422 aa15.91■□□□□ 0.14
RABGGTA-220ENST00000560998 GJB4Q9NTQ9 266 aa15.91■□□□□ 0.14
RABGGTA-220ENST00000560998 ZSWIM5Q9P217 1185 aa15.91■□□□□ 0.14
RABGGTA-220ENST00000560998 MINPP1Q9UNW1 487 aa15.91■□□□□ 0.14
RABGGTA-220ENST00000560998 NHSQ6T4R5 1651 aa15.91■□□□□ 0.14
RABGGTA-220ENST00000560998 THSD7AQ9UPZ6 1657 aa15.9■□□□□ 0.14
RABGGTA-220ENST00000560998 LOC102724159A0A0B4J2E5 919 aa15.9■□□□□ 0.14
RABGGTA-220ENST00000560998 WTIPA6NIX2 430 aaPredicted RBP15.9■□□□□ 0.14
RABGGTA-220ENST00000560998 ARHGAP6O43182 974 aa15.9■□□□□ 0.14
RABGGTA-220ENST00000560998 ERLIN1O75477 346 aa15.9■□□□□ 0.14
RABGGTA-220ENST00000560998 RXRAP19793 462 aa15.9■□□□□ 0.14
RABGGTA-220ENST00000560998 CYP7A1P22680 504 aa15.9■□□□□ 0.14
RABGGTA-220ENST00000560998 CDC27P30260 824 aa15.9■□□□□ 0.14
RABGGTA-220ENST00000560998 USP5P45974 858 aa15.9■□□□□ 0.14
RABGGTA-220ENST00000560998 ME1P48163 572 aa15.9■□□□□ 0.14
RABGGTA-220ENST00000560998 PWP2Q15269 919 aaKnown RBP15.9■□□□□ 0.14
RABGGTA-220ENST00000560998 NFXL1Q6ZNB6 911 aa15.9■□□□□ 0.14
RABGGTA-220ENST00000560998 MFSD6Q6ZSS7 791 aa15.9■□□□□ 0.14
RABGGTA-220ENST00000560998 MIGA1Q8NAN2 632 aa15.9■□□□□ 0.14
RABGGTA-220ENST00000560998 A0A1W2PQ27 194 aa15.89■□□□□ 0.13
RABGGTA-220ENST00000560998 A0A1W2PQ64 194 aa15.89■□□□□ 0.13
RABGGTA-220ENST00000560998 A0A1W2PQD8 194 aa15.89■□□□□ 0.13
RABGGTA-220ENST00000560998 KIF23Q02241 960 aaPredicted RBP15.89■□□□□ 0.13
RABGGTA-220ENST00000560998 GNL2Q13823 731 aaKnown RBP15.89■□□□□ 0.13
RABGGTA-220ENST00000560998 MYSM1Q5VVJ2 828 aa15.89■□□□□ 0.13
RABGGTA-220ENST00000560998 CPLX2Q6PUV4 134 aaKnown RBP15.89■□□□□ 0.13
RABGGTA-220ENST00000560998 ADGRA1Q86SQ6 560 aa15.89■□□□□ 0.13
RABGGTA-220ENST00000560998 MICU3Q86XE3 530 aa15.89■□□□□ 0.13
RABGGTA-220ENST00000560998 FSIP1Q8NA03 581 aa15.89■□□□□ 0.13
RABGGTA-220ENST00000560998 LINC00301Q8NCQ3 95 aa15.89■□□□□ 0.13
RABGGTA-220ENST00000560998 CELF1Q92879 486 aaKnown RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms