RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 FAM107BQ9H098 131 aa9.82□□□□□ -0.84
CCDC33-209ENST00000560565 EFCC1Q9HA90 598 aa9.82□□□□□ -0.84
CCDC33-209ENST00000560565 POLLQ9UGP5 575 aa9.82□□□□□ -0.84
CCDC33-209ENST00000560565 HACL1Q9UJ83 578 aa9.82□□□□□ -0.84
CCDC33-209ENST00000560565 COL4A1P02462 1669 aa9.82□□□□□ -0.84
CCDC33-209ENST00000560565 COL4A5P29400 1685 aa9.82□□□□□ -0.84
CCDC33-209ENST00000560565 UFL1O94874 794 aa9.81□□□□□ -0.84
CCDC33-209ENST00000560565 UQCRFS1P1P0C7P4 283 aa9.81□□□□□ -0.84
CCDC33-209ENST00000560565 SLC5A1P13866 664 aa9.81□□□□□ -0.84
CCDC33-209ENST00000560565 FGFR2P21802 821 aa9.81□□□□□ -0.84
CCDC33-209ENST00000560565 MCM3P25205 808 aa9.81□□□□□ -0.84
CCDC33-209ENST00000560565 LMOD1P29536 600 aaPredicted RBP9.81□□□□□ -0.84
CCDC33-209ENST00000560565 CCZ1BP86790 482 aa9.81□□□□□ -0.84
CCDC33-209ENST00000560565 CCZ1P86791 482 aaPredicted RBP9.81□□□□□ -0.84
CCDC33-209ENST00000560565 CXCL9Q07325 125 aa9.81□□□□□ -0.84
CCDC33-209ENST00000560565 LRMPQ12912 555 aa9.81□□□□□ -0.84
CCDC33-209ENST00000560565 BRF1Q92994 677 aa9.81□□□□□ -0.84
CCDC33-209ENST00000560565 ZNF274Q96GC6 653 aaPredicted RBP9.81□□□□□ -0.84
CCDC33-209ENST00000560565 NEUROD6Q96NK8 337 aa9.81□□□□□ -0.84
CCDC33-209ENST00000560565 ZC3H12CQ9C0D7 883 aaKnown RBP9.81□□□□□ -0.84
CCDC33-209ENST00000560565 ANKRD2Q9GZV1 360 aa9.81□□□□□ -0.84
CCDC33-209ENST00000560565 TAF1DQ9H5J8 278 aaPredicted RBP9.81□□□□□ -0.84
CCDC33-209ENST00000560565 RTEL1Q9NZ71 1219 aa9.81□□□□□ -0.84
CCDC33-209ENST00000560565 GGA1Q9UJY5 639 aa9.81□□□□□ -0.84
CCDC33-209ENST00000560565 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.81□□□□□ -0.84
CCDC33-209ENST00000560565 XDHP47989 1333 aa9.81□□□□□ -0.84
CCDC33-209ENST00000560565 LTBP1Q14766 1721 aa9.8□□□□□ -0.84
CCDC33-209ENST00000560565 G3V3G9 751 aa9.8□□□□□ -0.84
CCDC33-209ENST00000560565 TULP2O00295 520 aa9.8□□□□□ -0.84
CCDC33-209ENST00000560565 ARHGAP6O43182 974 aa9.8□□□□□ -0.84
CCDC33-209ENST00000560565 RAD17O75943 681 aa9.8□□□□□ -0.84
CCDC33-209ENST00000560565 LARGE1O95461 756 aa9.8□□□□□ -0.84
CCDC33-209ENST00000560565 IFIT1P09914 478 aaKnown RBP9.8□□□□□ -0.84
CCDC33-209ENST00000560565 EPHX2P34913 555 aa9.8□□□□□ -0.84
CCDC33-209ENST00000560565 TNNT3P45378 269 aaPredicted RBP9.8□□□□□ -0.84
CCDC33-209ENST00000560565 ME1P48163 572 aa9.8□□□□□ -0.84
CCDC33-209ENST00000560565 TIMM10P62072 90 aa9.8□□□□□ -0.84
CCDC33-209ENST00000560565 PTH1RQ03431 593 aa9.8□□□□□ -0.84
CCDC33-209ENST00000560565 NMIQ13287 307 aaPredicted RBP9.8□□□□□ -0.84
CCDC33-209ENST00000560565 UBE4AQ14139 1066 aa9.8□□□□□ -0.84
CCDC33-209ENST00000560565 TNIP1Q15025 636 aa9.8□□□□□ -0.84
CCDC33-209ENST00000560565 BRD3Q15059 726 aa9.8□□□□□ -0.84
CCDC33-209ENST00000560565 ELF2Q15723 593 aa9.8□□□□□ -0.84
CCDC33-209ENST00000560565 EAPPQ56P03 285 aaPredicted RBP9.8□□□□□ -0.84
CCDC33-209ENST00000560565 HABP4Q5JVS0 413 aaKnown RBP9.8□□□□□ -0.84
CCDC33-209ENST00000560565 GORABQ5T7V8 394 aa9.8□□□□□ -0.84
CCDC33-209ENST00000560565 DCAF8Q5TAQ9 597 aa9.8□□□□□ -0.84
CCDC33-209ENST00000560565 CIAPIN1Q6FI81 312 aa9.8□□□□□ -0.84
CCDC33-209ENST00000560565 FBXO38Q6PIJ6 1188 aa9.8□□□□□ -0.84
CCDC33-209ENST00000560565 DHX32Q7L7V1 743 aaKnown RBP9.8□□□□□ -0.84
CCDC33-209ENST00000560565 PNMA8AQ86V59 439 aaPredicted RBP9.8□□□□□ -0.84
CCDC33-209ENST00000560565 SLC17A8Q8NDX2 589 aa9.8□□□□□ -0.84
CCDC33-209ENST00000560565 GOLGA5Q8TBA6 731 aa9.8□□□□□ -0.84
CCDC33-209ENST00000560565 IPO4Q8TEX9 1081 aaKnown RBP9.8□□□□□ -0.84
CCDC33-209ENST00000560565 XAGE2Q96GT9 111 aa9.8□□□□□ -0.84
CCDC33-209ENST00000560565 DSCC1Q9BVC3 393 aa9.8□□□□□ -0.84
CCDC33-209ENST00000560565 ARFGAP3Q9NP61 516 aa9.8□□□□□ -0.84
CCDC33-209ENST00000560565 HELLSQ9NRZ9 838 aa9.8□□□□□ -0.84
CCDC33-209ENST00000560565 TLR7Q9NYK1 1049 aaKnown RBP9.8□□□□□ -0.84
CCDC33-209ENST00000560565 MINPP1Q9UNW1 487 aa9.8□□□□□ -0.84
CCDC33-209ENST00000560565 MAST2Q6P0Q8 1798 aa9.8□□□□□ -0.84
CCDC33-209ENST00000560565 DUOX1Q9NRD9 1551 aa9.8□□□□□ -0.84
CCDC33-209ENST00000560565 IGSF3O75054 1194 aa9.79□□□□□ -0.84
CCDC33-209ENST00000560565 CDKL5O76039 1030 aa9.79□□□□□ -0.84
CCDC33-209ENST00000560565 SMC2O95347 1197 aa9.79□□□□□ -0.84
CCDC33-209ENST00000560565 ATP2B4P23634 1241 aa9.79□□□□□ -0.84
CCDC33-209ENST00000560565 NLRP12P59046 1061 aa9.79□□□□□ -0.84
CCDC33-209ENST00000560565 TOB2Q14106 344 aaPredicted RBP9.79□□□□□ -0.84
CCDC33-209ENST00000560565 DOK7Q18PE1 504 aa9.79□□□□□ -0.84
CCDC33-209ENST00000560565 ADCK5Q3MIX3 580 aa9.79□□□□□ -0.84
CCDC33-209ENST00000560565 MCMDC2Q4G0Z9 681 aa9.79□□□□□ -0.84
CCDC33-209ENST00000560565 ARHGAP29Q52LW3 1261 aa9.79□□□□□ -0.84
CCDC33-209ENST00000560565 TTC39AQ5SRH9 613 aa9.79□□□□□ -0.84
CCDC33-209ENST00000560565 CHADLQ6NUI6 762 aa9.79□□□□□ -0.84
CCDC33-209ENST00000560565 CPLX2Q6PUV4 134 aaKnown RBP9.79□□□□□ -0.84
CCDC33-209ENST00000560565 LEKR1Q6ZMV7 388 aa9.79□□□□□ -0.84
CCDC33-209ENST00000560565 SYNE3Q6ZMZ3 975 aa9.79□□□□□ -0.84
CCDC33-209ENST00000560565 FERMT3Q86UX7 667 aa9.79□□□□□ -0.84
CCDC33-209ENST00000560565 LDHDQ86WU2 507 aa9.79□□□□□ -0.84
CCDC33-209ENST00000560565 NECAB1Q8N987 351 aa9.79□□□□□ -0.84
CCDC33-209ENST00000560565 FSIP1Q8NA03 581 aa9.79□□□□□ -0.84
CCDC33-209ENST00000560565 EXOC4Q96A65 974 aa9.79□□□□□ -0.84
CCDC33-209ENST00000560565 PPP1R13BQ96KQ4 1090 aa9.79□□□□□ -0.84
CCDC33-209ENST00000560565 GPR101Q96P66 508 aaPredicted RBP9.79□□□□□ -0.84
CCDC33-209ENST00000560565 NAA15Q9BXJ9 866 aaKnown RBP9.79□□□□□ -0.84
CCDC33-209ENST00000560565 BOLA2Q9H3K6 86 aa9.79□□□□□ -0.84
CCDC33-209ENST00000560565 DBNDD1Q9H9R9 158 aa9.79□□□□□ -0.84
CCDC33-209ENST00000560565 POLR3EQ9NVU0 708 aa9.79□□□□□ -0.84
CCDC33-209ENST00000560565 KIAA1468Q9P260 1216 aa9.79□□□□□ -0.84
CCDC33-209ENST00000560565 IQSEC3Q9UPP2 1182 aaPredicted RBP9.79□□□□□ -0.84
CCDC33-209ENST00000560565 CLEC11AQ9Y240 323 aa9.79□□□□□ -0.84
CCDC33-209ENST00000560565 LAMA4Q16363 1823 aa9.79□□□□□ -0.84
CCDC33-209ENST00000560565 WDR19Q8NEZ3 1342 aa9.79□□□□□ -0.84
CCDC33-209ENST00000560565 YDJCA8MPS7 323 aa9.78□□□□□ -0.84
CCDC33-209ENST00000560565 ECE2O60344 883 aa9.78□□□□□ -0.84
CCDC33-209ENST00000560565 MAP4K4O95819 1239 aaPredicted RBP9.78□□□□□ -0.84
CCDC33-209ENST00000560565 ZFYP08048 801 aaPredicted RBP9.78□□□□□ -0.84
CCDC33-209ENST00000560565 SLC3A2P08195 630 aaKnown RBP9.78□□□□□ -0.84
CCDC33-209ENST00000560565 POTEIP0CG38 1075 aa9.78□□□□□ -0.84
CCDC33-209ENST00000560565 POTEJP0CG39 1038 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms