RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 ZNF541Q9H0D2 1346 aa10.09□□□□□ -0.79
TRAF3-209ENST00000560463 SMIM22K7EJ46 135 aa10.09□□□□□ -0.79
TRAF3-209ENST00000560463 WNT10BO00744 389 aa10.09□□□□□ -0.79
TRAF3-209ENST00000560463 ZBTB43O43298 467 aa10.09□□□□□ -0.79
TRAF3-209ENST00000560463 TSPY3P0CV98 308 aa10.09□□□□□ -0.79
TRAF3-209ENST00000560463 TSPY8P0CW00 308 aa10.09□□□□□ -0.79
TRAF3-209ENST00000560463 CALM1P0DP23 149 aa10.09□□□□□ -0.79
TRAF3-209ENST00000560463 CALM2P0DP24 149 aa10.09□□□□□ -0.79
TRAF3-209ENST00000560463 CALM3P0DP25 149 aa10.09□□□□□ -0.79
TRAF3-209ENST00000560463 RASA1P20936 1047 aa10.09□□□□□ -0.79
TRAF3-209ENST00000560463 NUCB2P80303 420 aa10.09□□□□□ -0.79
TRAF3-209ENST00000560463 TFAP4Q01664 338 aa10.09□□□□□ -0.79
TRAF3-209ENST00000560463 TNFAIP1Q13829 316 aa10.09□□□□□ -0.79
TRAF3-209ENST00000560463 GPR162Q16538 588 aa10.09□□□□□ -0.79
TRAF3-209ENST00000560463 PPP4R3BQ5MIZ7 849 aa10.09□□□□□ -0.79
TRAF3-209ENST00000560463 APOA5Q6Q788 366 aa10.09□□□□□ -0.79
TRAF3-209ENST00000560463 NFXL1Q6ZNB6 911 aa10.09□□□□□ -0.79
TRAF3-209ENST00000560463 DGKHQ86XP1 1220 aa10.09□□□□□ -0.79
TRAF3-209ENST00000560463 MICALL2Q8IY33 904 aa10.09□□□□□ -0.79
TRAF3-209ENST00000560463 NEDD1Q8NHV4 660 aa10.09□□□□□ -0.79
TRAF3-209ENST00000560463 ANKS1AQ92625 1134 aa10.09□□□□□ -0.79
TRAF3-209ENST00000560463 DYNLL2Q96FJ2 89 aa10.09□□□□□ -0.79
TRAF3-209ENST00000560463 LARP6Q9BRS8 491 aaKnown RBP10.09□□□□□ -0.79
TRAF3-209ENST00000560463 RNF181Q9P0P0 153 aa10.09□□□□□ -0.79
TRAF3-209ENST00000560463 HERC5Q9UII4 1024 aaKnown RBP10.09□□□□□ -0.79
TRAF3-209ENST00000560463 KIF3AQ9Y496 699 aa10.09□□□□□ -0.79
TRAF3-209ENST00000560463 SLC12A7Q9Y666 1083 aa10.09□□□□□ -0.79
TRAF3-209ENST00000560463 PTPRFP10586 1907 aa10.08□□□□□ -0.8
TRAF3-209ENST00000560463 DDTLA6NHG4 134 aaPredicted RBP10.08□□□□□ -0.8
TRAF3-209ENST00000560463 PDCP20941 246 aa10.08□□□□□ -0.8
TRAF3-209ENST00000560463 KCNA4P22459 653 aa10.08□□□□□ -0.8
TRAF3-209ENST00000560463 METAP2P50579 478 aaKnown RBP eCLIP10.08□□□□□ -0.8
TRAF3-209ENST00000560463 CACNB3P54284 484 aa10.08□□□□□ -0.8
TRAF3-209ENST00000560463 HMGN5P82970 282 aaKnown RBP10.08□□□□□ -0.8
TRAF3-209ENST00000560463 EVX2Q03828 476 aa10.08□□□□□ -0.8
TRAF3-209ENST00000560463 SCRN1Q12765 414 aa10.08□□□□□ -0.8
TRAF3-209ENST00000560463 STK3Q13188 491 aa10.08□□□□□ -0.8
TRAF3-209ENST00000560463 SLC4A8Q2Y0W8 1093 aa10.08□□□□□ -0.8
TRAF3-209ENST00000560463 IFIT1BQ5T764 474 aaKnown RBP10.08□□□□□ -0.8
TRAF3-209ENST00000560463 CPLX2Q6PUV4 134 aaKnown RBP10.08□□□□□ -0.8
TRAF3-209ENST00000560463 ZSCAN29Q8IWY8 852 aaPredicted RBP10.08□□□□□ -0.8
TRAF3-209ENST00000560463 CRACR2BQ8N4Y2 399 aaPredicted RBP10.08□□□□□ -0.8
TRAF3-209ENST00000560463 ENAHQ8N8S7 591 aaPredicted RBP10.08□□□□□ -0.8
TRAF3-209ENST00000560463 NECAB1Q8N987 351 aa10.08□□□□□ -0.8
TRAF3-209ENST00000560463 NKX2-3Q8TAU0 364 aa10.08□□□□□ -0.8
TRAF3-209ENST00000560463 CCDC17Q96LX7 622 aa10.08□□□□□ -0.8
TRAF3-209ENST00000560463 ZKSCAN3Q9BRR0 538 aa10.08□□□□□ -0.8
TRAF3-209ENST00000560463 TRIM34Q9BYJ4 488 aa10.08□□□□□ -0.8
TRAF3-209ENST00000560463 FOXD4L1Q9NU39 408 aa10.08□□□□□ -0.8
TRAF3-209ENST00000560463 GPRC5DQ9NZD1 345 aa10.08□□□□□ -0.8
TRAF3-209ENST00000560463 BRPF3Q9ULD4 1205 aa10.08□□□□□ -0.8
TRAF3-209ENST00000560463 NAP1L2Q9ULW6 460 aaPredicted RBP10.08□□□□□ -0.8
TRAF3-209ENST00000560463 PARP14Q460N5 1801 aa10.07□□□□□ -0.8
TRAF3-209ENST00000560463 CNTNAP1P78357 1384 aa10.07□□□□□ -0.8
TRAF3-209ENST00000560463 CCDC196A0A1B0GTZ2 297 aa10.07□□□□□ -0.8
TRAF3-209ENST00000560463 GOLGA8BA8MQT2 603 aa10.07□□□□□ -0.8
TRAF3-209ENST00000560463 CDKL5O76039 1030 aa10.07□□□□□ -0.8
TRAF3-209ENST00000560463 GJB2P29033 226 aa10.07□□□□□ -0.8
TRAF3-209ENST00000560463 CCT2P78371 535 aaKnown RBP10.07□□□□□ -0.8
TRAF3-209ENST00000560463 TCP10Q12799 353 aa10.07□□□□□ -0.8
TRAF3-209ENST00000560463 NBPF9Q3BBW0 867 aa10.07□□□□□ -0.8
TRAF3-209ENST00000560463 FAM47AQ5JRC9 791 aa10.07□□□□□ -0.8
TRAF3-209ENST00000560463 C9orf131Q5VYM1 1079 aa10.07□□□□□ -0.8
TRAF3-209ENST00000560463 DPY19L2Q6NUT2 758 aa10.07□□□□□ -0.8
TRAF3-209ENST00000560463 TATDN1Q6P1N9 297 aa10.07□□□□□ -0.8
TRAF3-209ENST00000560463 CATIPQ7Z7H3 387 aa10.07□□□□□ -0.8
TRAF3-209ENST00000560463 ZFPM1Q8IX07 1006 aa10.07□□□□□ -0.8
TRAF3-209ENST00000560463 ZNF654Q8IZM8 581 aa10.07□□□□□ -0.8
TRAF3-209ENST00000560463 RGS22Q8NE09 1264 aa10.07□□□□□ -0.8
TRAF3-209ENST00000560463 SMARCC2Q8TAQ2 1214 aa10.07□□□□□ -0.8
TRAF3-209ENST00000560463 MAP3K14Q99558 947 aa10.07□□□□□ -0.8
TRAF3-209ENST00000560463 GPHNQ9NQX3 736 aaPredicted RBP10.07□□□□□ -0.8
TRAF3-209ENST00000560463 HPS5Q9UPZ3 1129 aa10.07□□□□□ -0.8
TRAF3-209ENST00000560463 OTOFQ9HC10 1997 aa10.06□□□□□ -0.8
TRAF3-209ENST00000560463 CLRN2A0PK11 232 aa10.06□□□□□ -0.8
TRAF3-209ENST00000560463 TCP10L2B9ZVM9 353 aa10.06□□□□□ -0.8
TRAF3-209ENST00000560463 CPLX1O14810 134 aa10.06□□□□□ -0.8
TRAF3-209ENST00000560463 TBC1D12O60347 775 aa10.06□□□□□ -0.8
TRAF3-209ENST00000560463 DDAH1O94760 285 aa10.06□□□□□ -0.8
TRAF3-209ENST00000560463 LMOD1P29536 600 aaPredicted RBP10.06□□□□□ -0.8
TRAF3-209ENST00000560463 SHMT1P34896 483 aa10.06□□□□□ -0.8
TRAF3-209ENST00000560463 NOVP48745 357 aa10.06□□□□□ -0.8
TRAF3-209ENST00000560463 ST3GAL1Q11201 340 aa10.06□□□□□ -0.8
TRAF3-209ENST00000560463 RAB3GAP1Q15042 981 aa10.06□□□□□ -0.8
TRAF3-209ENST00000560463 KIF4BQ2VIQ3 1234 aa10.06□□□□□ -0.8
TRAF3-209ENST00000560463 RCSD1Q6JBY9 416 aa10.06□□□□□ -0.8
TRAF3-209ENST00000560463 SH3BP5LQ7L8J4 393 aa10.06□□□□□ -0.8
TRAF3-209ENST00000560463 APOBEC3FQ8IUX4 373 aaKnown RBP10.06□□□□□ -0.8
TRAF3-209ENST00000560463 SLC44A5Q8NCS7 719 aa10.06□□□□□ -0.8
TRAF3-209ENST00000560463 NSUN7Q8NE18 718 aaKnown RBP10.06□□□□□ -0.8
TRAF3-209ENST00000560463 CSRNP1Q96S65 589 aa10.06□□□□□ -0.8
TRAF3-209ENST00000560463 VEZTQ9HBM0 779 aa10.06□□□□□ -0.8
TRAF3-209ENST00000560463 IL17RBQ9NRM6 502 aa10.06□□□□□ -0.8
TRAF3-209ENST00000560463 RBM28Q9NW13 759 aaKnown RBP10.06□□□□□ -0.8
TRAF3-209ENST00000560463 TRPM7Q96QT4 1865 aa10.06□□□□□ -0.8
TRAF3-209ENST00000560463 SRCAPQ6ZRS2 3230 aa10.05□□□□□ -0.8
TRAF3-209ENST00000560463 GOLGA8AA7E2F4 631 aa10.05□□□□□ -0.8
TRAF3-209ENST00000560463 MAP3K10Q02779 954 aa10.05□□□□□ -0.8
TRAF3-209ENST00000560463 CERKLQ49MI3 558 aaPredicted RBP10.05□□□□□ -0.8
TRAF3-209ENST00000560463 TBC1D10BQ4KMP7 808 aaPredicted RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms