RNA–Protein interactions for RNA: ENST00000560349.1

CARMIL3-203, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 1 (best)

Gene CARMIL3, Length 2,664 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-203ENST00000560349 BRAPQ7Z569 592 aa16.32■□□□□ 0.2
CARMIL3-203ENST00000560349 DIS3L2Q8IYB7 885 aaKnown RBP16.32■□□□□ 0.2
CARMIL3-203ENST00000560349 CRAMP1Q96RY5 1269 aa16.32■□□□□ 0.2
CARMIL3-203ENST00000560349 PDGFDQ9GZP0 370 aaPredicted RBP16.32■□□□□ 0.2
CARMIL3-203ENST00000560349 FAM205CA6NFA0 338 aa16.31■□□□□ 0.2
CARMIL3-203ENST00000560349 AP5Z1O43299 807 aa16.31■□□□□ 0.2
CARMIL3-203ENST00000560349 TFAP4Q01664 338 aa16.31■□□□□ 0.2
CARMIL3-203ENST00000560349 EN1Q05925 392 aaPredicted RBP16.31■□□□□ 0.2
CARMIL3-203ENST00000560349 CATIPQ7Z7H3 387 aa16.31■□□□□ 0.2
CARMIL3-203ENST00000560349 KCNQ5Q9NR82 932 aa16.31■□□□□ 0.2
CARMIL3-203ENST00000560349 MKRN1Q9UHC7 482 aaKnown RBP16.31■□□□□ 0.2
CARMIL3-203ENST00000560349 ZKSCAN5Q9Y2L8 839 aa16.31■□□□□ 0.2
CARMIL3-203ENST00000560349 PARP3Q9Y6F1 533 aa16.31■□□□□ 0.2
CARMIL3-203ENST00000560349 WDHD1O75717 1129 aaPredicted RBP16.31■□□□□ 0.2
CARMIL3-203ENST00000560349 IL1R1P14778 569 aa16.31■□□□□ 0.2
CARMIL3-203ENST00000560349 VEGFAP15692 232 aaPredicted RBP16.31■□□□□ 0.2
CARMIL3-203ENST00000560349 TROAPQ12815 778 aa16.31■□□□□ 0.2
CARMIL3-203ENST00000560349 CLIC6Q96NY7 704 aa16.31■□□□□ 0.2
CARMIL3-203ENST00000560349 NOL10Q9BSC4 688 aaKnown RBP16.31■□□□□ 0.2
CARMIL3-203ENST00000560349 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.31■□□□□ 0.2
CARMIL3-203ENST00000560349 DNAJC25Q9H1X3 360 aa16.31■□□□□ 0.2
CARMIL3-203ENST00000560349 V9GY48 417 aaPredicted RBP16.31■□□□□ 0.2
CARMIL3-203ENST00000560349 KLRG2A4D1S0 409 aaPredicted RBP16.3■□□□□ 0.2
CARMIL3-203ENST00000560349 BAG3O95817 575 aa16.3■□□□□ 0.2
CARMIL3-203ENST00000560349 SCNN1DP51172 638 aa16.3■□□□□ 0.2
CARMIL3-203ENST00000560349 PDE4BQ07343 736 aa16.3■□□□□ 0.2
CARMIL3-203ENST00000560349 PICALMQ13492 652 aa16.3■□□□□ 0.2
CARMIL3-203ENST00000560349 EZH2Q15910 746 aaKnown RBP16.3■□□□□ 0.2
CARMIL3-203ENST00000560349 SPECC1Q5M775 1068 aa16.3■□□□□ 0.2
CARMIL3-203ENST00000560349 C12orf60Q5U649 245 aa16.3■□□□□ 0.2
CARMIL3-203ENST00000560349 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.3■□□□□ 0.2
CARMIL3-203ENST00000560349 TEX11Q8IYF3 940 aa16.3■□□□□ 0.2
CARMIL3-203ENST00000560349 TMTC2Q8N394 836 aa16.3■□□□□ 0.2
CARMIL3-203ENST00000560349 MKNK2Q9HBH9 465 aa16.3■□□□□ 0.2
CARMIL3-203ENST00000560349 ATP6V0A2Q9Y487 856 aa16.3■□□□□ 0.2
CARMIL3-203ENST00000560349 CHRNA5P30532 468 aa16.3■□□□□ 0.2
CARMIL3-203ENST00000560349 POTEAQ6S8J7 498 aa16.3■□□□□ 0.2
CARMIL3-203ENST00000560349 POLR3EQ9NVU0 708 aa16.3■□□□□ 0.2
CARMIL3-203ENST00000560349 KINO60870 393 aaKnown RBP16.29■□□□□ 0.2
CARMIL3-203ENST00000560349 FGRP09769 529 aa16.29■□□□□ 0.2
CARMIL3-203ENST00000560349 NOM1Q5C9Z4 860 aaKnown RBP16.29■□□□□ 0.2
CARMIL3-203ENST00000560349 DPP8Q6V1X1 898 aaPredicted RBP16.29■□□□□ 0.2
CARMIL3-203ENST00000560349 MRPS27Q92552 414 aaKnown RBP16.29■□□□□ 0.2
CARMIL3-203ENST00000560349 DBNDD1Q9H9R9 158 aa16.29■□□□□ 0.2
CARMIL3-203ENST00000560349 IL17RBQ9NRM6 502 aa16.29■□□□□ 0.2
CARMIL3-203ENST00000560349 RGS17Q9UGC6 210 aaPredicted RBP16.29■□□□□ 0.2
CARMIL3-203ENST00000560349 MMP1P03956 469 aa16.29■□□□□ 0.2
CARMIL3-203ENST00000560349 SLURP2P0DP57 97 aa16.29■□□□□ 0.2
CARMIL3-203ENST00000560349 RCSD1Q6JBY9 416 aa16.29■□□□□ 0.2
CARMIL3-203ENST00000560349 MAST2Q6P0Q8 1798 aa16.29■□□□□ 0.2
CARMIL3-203ENST00000560349 CERS5Q8N5B7 392 aa16.29■□□□□ 0.2
CARMIL3-203ENST00000560349 ENGASEQ8NFI3 743 aa16.29■□□□□ 0.2
CARMIL3-203ENST00000560349 KIAA1551Q9HCM1 1747 aa16.28■□□□□ 0.2
CARMIL3-203ENST00000560349 ORC4O43929 436 aa16.28■□□□□ 0.2
CARMIL3-203ENST00000560349 DEXIO95424 95 aa16.28■□□□□ 0.2
CARMIL3-203ENST00000560349 SLC3A2P08195 630 aaKnown RBP16.28■□□□□ 0.2
CARMIL3-203ENST00000560349 GSTO1P78417 241 aa16.28■□□□□ 0.2
CARMIL3-203ENST00000560349 FAM160A1Q05DH4 1040 aa16.28■□□□□ 0.2
CARMIL3-203ENST00000560349 C15orf52Q6ZUT6 534 aaKnown RBP16.28■□□□□ 0.2
CARMIL3-203ENST00000560349 SP8Q8IXZ3 490 aa16.28■□□□□ 0.2
CARMIL3-203ENST00000560349 ZC3H12CQ9C0D7 883 aaKnown RBP16.28■□□□□ 0.2
CARMIL3-203ENST00000560349 STX8Q9UNK0 236 aa16.28■□□□□ 0.2
CARMIL3-203ENST00000560349 STK36Q9NRP7 1315 aa16.28■□□□□ 0.2
CARMIL3-203ENST00000560349 CCDC196A0A1B0GTZ2 297 aa16.28■□□□□ 0.2
CARMIL3-203ENST00000560349 ADCY5O95622 1261 aa16.28■□□□□ 0.2
CARMIL3-203ENST00000560349 AKAP17AQ02040 695 aaKnown RBP16.28■□□□□ 0.2
CARMIL3-203ENST00000560349 PKN1Q16512 942 aa16.28■□□□□ 0.2
CARMIL3-203ENST00000560349 SBK1Q52WX2 424 aa16.28■□□□□ 0.2
CARMIL3-203ENST00000560349 NOSTRINQ8IVI9 506 aa16.28■□□□□ 0.2
CARMIL3-203ENST00000560349 SRBD1Q8N5C6 995 aaKnown RBP16.28■□□□□ 0.2
CARMIL3-203ENST00000560349 R3HCC1Q9Y3T6 440 aaKnown RBP16.28■□□□□ 0.2
CARMIL3-203ENST00000560349 NPR1P16066 1061 aa16.27■□□□□ 0.2
CARMIL3-203ENST00000560349 U2AF2P26368 475 aaKnown RBP eCLIP16.27■□□□□ 0.2
CARMIL3-203ENST00000560349 FUT2Q10981 343 aa16.27■□□□□ 0.2
CARMIL3-203ENST00000560349 EARS2Q5JPH6 523 aaKnown RBP16.27■□□□□ 0.2
CARMIL3-203ENST00000560349 ADALQ6DHV7 355 aa16.27■□□□□ 0.2
CARMIL3-203ENST00000560349 SASS6Q6UVJ0 657 aa16.27■□□□□ 0.2
CARMIL3-203ENST00000560349 KCNG4Q8TDN1 519 aa16.27■□□□□ 0.2
CARMIL3-203ENST00000560349 CPVLQ9H3G5 476 aa16.27■□□□□ 0.2
CARMIL3-203ENST00000560349 CCDC39Q9UFE4 941 aa16.27■□□□□ 0.2
CARMIL3-203ENST00000560349 FLT1P17948 1338 aa16.27■□□□□ 0.19
CARMIL3-203ENST00000560349 ADAMTS3O15072 1205 aa16.27■□□□□ 0.19
CARMIL3-203ENST00000560349 YEATS4O95619 227 aa16.27■□□□□ 0.19
CARMIL3-203ENST00000560349 PTMAP06454 111 aaKnown RBP16.27■□□□□ 0.19
CARMIL3-203ENST00000560349 GRIN1Q05586 938 aa16.27■□□□□ 0.19
CARMIL3-203ENST00000560349 AXDND1Q5T1B0 1012 aaPredicted RBP16.27■□□□□ 0.19
CARMIL3-203ENST00000560349 ATL3Q6DD88 541 aa16.27■□□□□ 0.19
CARMIL3-203ENST00000560349 C11orf57Q6ZUT1 292 aaPredicted RBP16.27■□□□□ 0.19
CARMIL3-203ENST00000560349 CBX8Q9HC52 389 aa16.27■□□□□ 0.19
CARMIL3-203ENST00000560349 PCDHAC2Q9Y5I4 1007 aa16.27■□□□□ 0.19
CARMIL3-203ENST00000560349 NID2Q14112 1375 aa16.26■□□□□ 0.19
CARMIL3-203ENST00000560349 TSPY3P0CV98 308 aa16.26■□□□□ 0.19
CARMIL3-203ENST00000560349 TSPY8P0CW00 308 aa16.26■□□□□ 0.19
CARMIL3-203ENST00000560349 TOB1P50616 345 aaPredicted RBP16.26■□□□□ 0.19
CARMIL3-203ENST00000560349 RHBDL3P58872 404 aa16.26■□□□□ 0.19
CARMIL3-203ENST00000560349 FMR1NBQ8N0W7 255 aaPredicted RBP16.26■□□□□ 0.19
CARMIL3-203ENST00000560349 STAG2Q8N3U4 1231 aa16.26■□□□□ 0.19
CARMIL3-203ENST00000560349 ZNF830Q96NB3 372 aaPredicted RBP16.26■□□□□ 0.19
CARMIL3-203ENST00000560349 SDF4Q9BRK5 362 aa16.26■□□□□ 0.19
CARMIL3-203ENST00000560349 DAGLAQ9Y4D2 1042 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms