RNA–Protein interactions for RNA: ENST00000560196.5

ZEB1-218, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,014 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-218ENST00000560196 NFKBIEO00221 500 aa16.88■□□□□ 0.29
ZEB1-218ENST00000560196 PSMD14O00487 310 aa16.88■□□□□ 0.29
ZEB1-218ENST00000560196 ADD1P35611 737 aaKnown RBP16.88■□□□□ 0.29
ZEB1-218ENST00000560196 TFAP4Q01664 338 aa16.88■□□□□ 0.29
ZEB1-218ENST00000560196 FAM47AQ5JRC9 791 aa16.88■□□□□ 0.29
ZEB1-218ENST00000560196 FANCBQ8NB91 859 aa16.88■□□□□ 0.29
ZEB1-218ENST00000560196 TMEM87AQ8NBN3 555 aa16.88■□□□□ 0.29
ZEB1-218ENST00000560196 NEDD1Q8NHV4 660 aa16.88■□□□□ 0.29
ZEB1-218ENST00000560196 MAP3K14Q99558 947 aa16.88■□□□□ 0.29
ZEB1-218ENST00000560196 EHD4Q9H223 541 aa16.88■□□□□ 0.29
ZEB1-218ENST00000560196 ZSCAN16Q9H4T2 348 aaPredicted RBP16.88■□□□□ 0.29
ZEB1-218ENST00000560196 SPON1Q9HCB6 807 aa16.88■□□□□ 0.29
ZEB1-218ENST00000560196 LMBRD1Q9NUN5 540 aa16.88■□□□□ 0.29
ZEB1-218ENST00000560196 RBM28Q9NW13 759 aaKnown RBP16.88■□□□□ 0.29
ZEB1-218ENST00000560196 SWAP70Q9UH65 585 aa16.88■□□□□ 0.29
ZEB1-218ENST00000560196 HDAC9Q9UKV0 1011 aa16.88■□□□□ 0.29
ZEB1-218ENST00000560196 ECM29Q5VYK3 1845 aa16.88■□□□□ 0.29
ZEB1-218ENST00000560196 PLIN4Q96Q06 1357 aa16.88■□□□□ 0.29
ZEB1-218ENST00000560196 ADAMTSL1Q8N6G6 1762 aa16.87■□□□□ 0.29
ZEB1-218ENST00000560196 H3BQV1 296 aa16.87■□□□□ 0.29
ZEB1-218ENST00000560196 TRAK2O60296 914 aa16.87■□□□□ 0.29
ZEB1-218ENST00000560196 DTNBO60941 627 aa16.87■□□□□ 0.29
ZEB1-218ENST00000560196 CFAP100Q494V2 611 aa16.87■□□□□ 0.29
ZEB1-218ENST00000560196 IFFO2Q5TF58 517 aa16.87■□□□□ 0.29
ZEB1-218ENST00000560196 RCSD1Q6JBY9 416 aa16.87■□□□□ 0.29
ZEB1-218ENST00000560196 RAB11FIP4Q86YS3 637 aa16.87■□□□□ 0.29
ZEB1-218ENST00000560196 MTMR14Q8NCE2 650 aa16.87■□□□□ 0.29
ZEB1-218ENST00000560196 DHX36Q9H2U1 1008 aaKnown RBP16.87■□□□□ 0.29
ZEB1-218ENST00000560196 PPP1R1BQ9UD71 204 aaPredicted RBP16.87■□□□□ 0.29
ZEB1-218ENST00000560196 ENTPD3O75355 529 aa16.86■□□□□ 0.29
ZEB1-218ENST00000560196 RAD17O75943 681 aa16.86■□□□□ 0.29
ZEB1-218ENST00000560196 FMNL1O95466 1100 aaPredicted RBP16.86■□□□□ 0.29
ZEB1-218ENST00000560196 HLA-DOAP06340 250 aa16.86■□□□□ 0.29
ZEB1-218ENST00000560196 TSPY3P0CV98 308 aa16.86■□□□□ 0.29
ZEB1-218ENST00000560196 TSPY8P0CW00 308 aa16.86■□□□□ 0.29
ZEB1-218ENST00000560196 NOVP48745 357 aa16.86■□□□□ 0.29
ZEB1-218ENST00000560196 RBM5P52756 815 aaKnown RBP eCLIP16.86■□□□□ 0.293e-6■■■■□ 22.2
ZEB1-218ENST00000560196 TROAPQ12815 778 aa16.86■□□□□ 0.29
ZEB1-218ENST00000560196 RESTQ13127 1097 aa16.86■□□□□ 0.29
ZEB1-218ENST00000560196 PICALMQ13492 652 aa16.86■□□□□ 0.29
ZEB1-218ENST00000560196 MYL10Q9BUA6 226 aa16.86■□□□□ 0.29
ZEB1-218ENST00000560196 IL17RBQ9NRM6 502 aa16.86■□□□□ 0.29
ZEB1-218ENST00000560196 BCS1LQ9Y276 419 aa16.86■□□□□ 0.29
ZEB1-218ENST00000560196 ARFGEF1Q9Y6D6 1849 aa16.86■□□□□ 0.29
ZEB1-218ENST00000560196 RXRAP19793 462 aa16.85■□□□□ 0.29
ZEB1-218ENST00000560196 CXCL9Q07325 125 aa16.85■□□□□ 0.29
ZEB1-218ENST00000560196 SSRP1Q08945 709 aaKnown RBP16.85■□□□□ 0.29
ZEB1-218ENST00000560196 NFIAQ12857 509 aa16.85■□□□□ 0.29
ZEB1-218ENST00000560196 CSPP1Q1MSJ5 1256 aa16.85■□□□□ 0.29
ZEB1-218ENST00000560196 SLC44A5Q8NCS7 719 aa16.85■□□□□ 0.29
ZEB1-218ENST00000560196 JDP2Q8WYK2 163 aa16.85■□□□□ 0.29
ZEB1-218ENST00000560196 WASF1Q92558 559 aa16.85■□□□□ 0.29
ZEB1-218ENST00000560196 C8orf76Q96K31 380 aa16.85■□□□□ 0.29
ZEB1-218ENST00000560196 FAM198AQ9UFP1 575 aa16.85■□□□□ 0.29
ZEB1-218ENST00000560196 SERPINB13Q9UIV8 391 aa16.85■□□□□ 0.29
ZEB1-218ENST00000560196 SPDYE2BA6NHP3 402 aa16.84■□□□□ 0.29
ZEB1-218ENST00000560196 SPDYE6P0CI01 402 aa16.84■□□□□ 0.29
ZEB1-218ENST00000560196 TNIP1Q15025 636 aa16.84■□□□□ 0.29
ZEB1-218ENST00000560196 SLC4A8Q2Y0W8 1093 aa16.84■□□□□ 0.29
ZEB1-218ENST00000560196 CIAPIN1Q6FI81 312 aa16.84■□□□□ 0.29
ZEB1-218ENST00000560196 NBPF11Q86T75 865 aa16.84■□□□□ 0.29
ZEB1-218ENST00000560196 CCDC144CPQ8IYA2 1237 aa16.84■□□□□ 0.29
ZEB1-218ENST00000560196 CRACR2BQ8N4Y2 399 aaPredicted RBP16.84■□□□□ 0.29
ZEB1-218ENST00000560196 OGFOD1Q8N543 542 aa16.84■□□□□ 0.29
ZEB1-218ENST00000560196 FBXO18Q8NFZ0 1043 aa16.84■□□□□ 0.29
ZEB1-218ENST00000560196 PCDHAC2Q9Y5I4 1007 aa16.84■□□□□ 0.29
ZEB1-218ENST00000560196 ATRNL1Q5VV63 1379 aa16.84■□□□□ 0.29
ZEB1-218ENST00000560196 NMT2O60551 498 aa16.83■□□□□ 0.28
ZEB1-218ENST00000560196 RPS12P25398 132 aaKnown RBP16.83■□□□□ 0.28
ZEB1-218ENST00000560196 KLHL40Q2TBA0 621 aa16.83■□□□□ 0.28
ZEB1-218ENST00000560196 FKBP1CQ5VVH2 108 aa16.83■□□□□ 0.28
ZEB1-218ENST00000560196 ATL3Q6DD88 541 aa16.83■□□□□ 0.28
ZEB1-218ENST00000560196 METTL16Q86W50 562 aaKnown RBP16.83■□□□□ 0.28
ZEB1-218ENST00000560196 TRIM22Q8IYM9 498 aa16.83■□□□□ 0.28
ZEB1-218ENST00000560196 KLHL34Q8N239 644 aa16.83■□□□□ 0.28
ZEB1-218ENST00000560196 NUP133Q8WUM0 1156 aa16.83■□□□□ 0.28
ZEB1-218ENST00000560196 PRMT6Q96LA8 375 aaPredicted RBP16.83■□□□□ 0.28
ZEB1-218ENST00000560196 ALG1Q9BT22 464 aa16.83■□□□□ 0.28
ZEB1-218ENST00000560196 RNF26Q9BY78 433 aaPredicted RBP16.83■□□□□ 0.28
ZEB1-218ENST00000560196 KAT14Q9H8E8 782 aa16.83■□□□□ 0.28
ZEB1-218ENST00000560196 IGKV6D-41A0A0C4DH26 115 aa16.82■□□□□ 0.28
ZEB1-218ENST00000560196 PRPF40AO75400 957 aaKnown RBP16.82■□□□□ 0.28
ZEB1-218ENST00000560196 KRT85P78386 507 aa16.82■□□□□ 0.28
ZEB1-218ENST00000560196 FUT2Q10981 343 aa16.82■□□□□ 0.28
ZEB1-218ENST00000560196 DLGAP5Q15398 846 aa16.82■□□□□ 0.28
ZEB1-218ENST00000560196 PPP4R3BQ5MIZ7 849 aa16.82■□□□□ 0.28
ZEB1-218ENST00000560196 TMTC3Q6ZXV5 915 aa16.82■□□□□ 0.28
ZEB1-218ENST00000560196 FOXP4Q8IVH2 680 aaPredicted RBP16.82■□□□□ 0.28
ZEB1-218ENST00000560196 NLGN2Q8NFZ4 835 aa16.82■□□□□ 0.28
ZEB1-218ENST00000560196 CTCFLQ8NI51 663 aaPredicted RBP16.82■□□□□ 0.28
ZEB1-218ENST00000560196 ZBED3Q96IU2 234 aaPredicted RBP16.82■□□□□ 0.28
ZEB1-218ENST00000560196 CHAMP1Q96JM3 812 aa16.82■□□□□ 0.28
ZEB1-218ENST00000560196 CCDC17Q96LX7 622 aa16.82■□□□□ 0.28
ZEB1-218ENST00000560196 TDRD3Q9H7E2 651 aaKnown RBP16.82■□□□□ 0.28
ZEB1-218ENST00000560196 TMOD2Q9NZR1 351 aa16.82■□□□□ 0.28
ZEB1-218ENST00000560196 PI4KBQ9UBF8 816 aa16.82■□□□□ 0.28
ZEB1-218ENST00000560196 DEXIO95424 95 aa16.81■□□□□ 0.28
ZEB1-218ENST00000560196 MBD3O95983 291 aa16.81■□□□□ 0.28
ZEB1-218ENST00000560196 KIF5BP33176 963 aa16.81■□□□□ 0.28
ZEB1-218ENST00000560196 SHMT1P34896 483 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms