RNA–Protein interactions for RNA: ENST00000560131.1

TPM1-222, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 537 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-222ENST00000560131 MARK1Q9P0L2 795 aa6.44□□□□□ -1.38
TPM1-222ENST00000560131 GRIN2AQ12879 1464 aa6.44□□□□□ -1.38
TPM1-222ENST00000560131 WDR7Q9Y4E6 1490 aa6.44□□□□□ -1.38
TPM1-222ENST00000560131 ASXL1Q8IXJ9 1541 aa6.44□□□□□ -1.38
TPM1-222ENST00000560131 REREQ9P2R6 1566 aa6.44□□□□□ -1.38
TPM1-222ENST00000560131 METTL12A8MUP2 240 aa6.43□□□□□ -1.38
TPM1-222ENST00000560131 SMAD7O15105 426 aaKnown RBP6.43□□□□□ -1.38
TPM1-222ENST00000560131 ZNF500O60304 480 aaPredicted RBP6.43□□□□□ -1.38
TPM1-222ENST00000560131 MAPTP10636 758 aaKnown RBP6.43□□□□□ -1.38
TPM1-222ENST00000560131 RGS3P49796 1198 aa6.43□□□□□ -1.38
TPM1-222ENST00000560131 EIF6P56537 245 aaKnown RBP6.43□□□□□ -1.38
TPM1-222ENST00000560131 CHMP4BP1P59074 171 aa6.43□□□□□ -1.38
TPM1-222ENST00000560131 SPEM2Q0P670 501 aa6.43□□□□□ -1.38
TPM1-222ENST00000560131 SEZ6Q53EL9 994 aa6.43□□□□□ -1.38
TPM1-222ENST00000560131 PLEKHG4Q58EX7 1191 aa6.43□□□□□ -1.38
TPM1-222ENST00000560131 DHX32Q7L7V1 743 aaKnown RBP6.43□□□□□ -1.38
TPM1-222ENST00000560131 SMC5Q8IY18 1101 aa6.43□□□□□ -1.38
TPM1-222ENST00000560131 GATAD2BQ8WXI9 593 aa6.43□□□□□ -1.38
TPM1-222ENST00000560131 TESK2Q96S53 571 aa6.43□□□□□ -1.38
TPM1-222ENST00000560131 LRRC3Q9BY71 257 aa6.43□□□□□ -1.38
TPM1-222ENST00000560131 KRTAP4-7Q9BYR0 210 aa6.43□□□□□ -1.38
TPM1-222ENST00000560131 PANK2Q9BZ23 570 aa6.43□□□□□ -1.38
TPM1-222ENST00000560131 MSRB2Q9Y3D2 182 aa6.43□□□□□ -1.38
TPM1-222ENST00000560131 SAMM50Q9Y512 469 aa6.43□□□□□ -1.38
TPM1-222ENST00000560131 MAST1Q9Y2H9 1570 aa6.43□□□□□ -1.38
TPM1-222ENST00000560131 MYO5CQ9NQX4 1742 aa6.42□□□□□ -1.38
TPM1-222ENST00000560131 URB2Q14146 1524 aaKnown RBP6.42□□□□□ -1.38
TPM1-222ENST00000560131 FAM135AQ9P2D6 1515 aa6.42□□□□□ -1.38
TPM1-222ENST00000560131 DCDC2BA2VCK2 349 aa6.42□□□□□ -1.38
TPM1-222ENST00000560131 DYNC1I1O14576 645 aa6.42□□□□□ -1.38
TPM1-222ENST00000560131 LMNB1P20700 586 aa6.42□□□□□ -1.38
TPM1-222ENST00000560131 GIPRP48546 466 aa6.42□□□□□ -1.38
TPM1-222ENST00000560131 NRLP54845 237 aa6.42□□□□□ -1.38
TPM1-222ENST00000560131 UBAP2LQ14157 1087 aaKnown RBP6.42□□□□□ -1.38
TPM1-222ENST00000560131 CCDC81Q6ZN84 652 aa6.42□□□□□ -1.38
TPM1-222ENST00000560131 C1orf229Q6ZS94 237 aaPredicted RBP6.42□□□□□ -1.38
TPM1-222ENST00000560131 KIAA1211Q6ZU35 1233 aa6.42□□□□□ -1.38
TPM1-222ENST00000560131 SKAP1Q86WV1 359 aa6.42□□□□□ -1.38
TPM1-222ENST00000560131 GBP4Q96PP9 640 aa6.42□□□□□ -1.38
TPM1-222ENST00000560131 ZNF576Q9H609 170 aa6.42□□□□□ -1.38
TPM1-222ENST00000560131 STRN4Q9NRL3 753 aa6.42□□□□□ -1.38
TPM1-222ENST00000560131 TMEM39AQ9NV64 488 aa6.42□□□□□ -1.38
TPM1-222ENST00000560131 GDF2Q9UK05 429 aaPredicted RBP6.42□□□□□ -1.38
TPM1-222ENST00000560131 PPT2Q9UMR5 302 aa6.42□□□□□ -1.38
TPM1-222ENST00000560131 NEURL4Q96JN8 1562 aa6.42□□□□□ -1.38
TPM1-222ENST00000560131 KIAA1210Q9ULL0 1709 aa6.42□□□□□ -1.38
TPM1-222ENST00000560131 IQGAP3Q86VI3 1631 aa6.41□□□□□ -1.38
TPM1-222ENST00000560131 LOC102724428A0A0B4J2F2 783 aa6.41□□□□□ -1.38
TPM1-222ENST00000560131 FAM221AA4D161 298 aa6.41□□□□□ -1.38
TPM1-222ENST00000560131 PDE2AO00408 941 aaPredicted RBP6.41□□□□□ -1.38
TPM1-222ENST00000560131 GNB5O14775 395 aa6.41□□□□□ -1.38
TPM1-222ENST00000560131 TLR3O15455 904 aaKnown RBP6.41□□□□□ -1.38
TPM1-222ENST00000560131 PAGE1O75459 146 aa6.41□□□□□ -1.38
TPM1-222ENST00000560131 F13A1P00488 732 aa6.41□□□□□ -1.38
TPM1-222ENST00000560131 IGHDP01880 384 aa6.41□□□□□ -1.38
TPM1-222ENST00000560131 THBS1P07996 1170 aa6.41□□□□□ -1.38
TPM1-222ENST00000560131 ZNF165P49910 485 aa6.41□□□□□ -1.38
TPM1-222ENST00000560131 SIK1P57059 783 aa6.41□□□□□ -1.38
TPM1-222ENST00000560131 ANAPC15P60006 121 aa6.41□□□□□ -1.38
TPM1-222ENST00000560131 TMF1P82094 1093 aa6.41□□□□□ -1.38
TPM1-222ENST00000560131 PPP2R3AQ06190 1150 aa6.41□□□□□ -1.38
TPM1-222ENST00000560131 FAAP100Q0VG06 881 aa6.41□□□□□ -1.38
TPM1-222ENST00000560131 MPP2Q14168 576 aa6.41□□□□□ -1.38
TPM1-222ENST00000560131 BNC2Q6ZN30 1099 aaPredicted RBP6.41□□□□□ -1.38
TPM1-222ENST00000560131 OR6P1Q8NGX9 317 aa6.41□□□□□ -1.38
TPM1-222ENST00000560131 ASAP3Q8TDY4 903 aa6.41□□□□□ -1.38
TPM1-222ENST00000560131 JARID2Q92833 1246 aaPredicted RBP6.41□□□□□ -1.38
TPM1-222ENST00000560131 BHMTQ93088 406 aa6.41□□□□□ -1.38
TPM1-222ENST00000560131 NSUN5Q96P11 429 aaKnown RBP6.41□□□□□ -1.38
TPM1-222ENST00000560131 HHIPQ96QV1 700 aa6.41□□□□□ -1.38
TPM1-222ENST00000560131 POLR3GLQ9BT43 218 aa6.41□□□□□ -1.38
TPM1-222ENST00000560131 NUCKS1Q9H1E3 243 aaKnown RBP6.41□□□□□ -1.38
TPM1-222ENST00000560131 MIR1-1HGQ9H1L0 117 aa6.41□□□□□ -1.38
TPM1-222ENST00000560131 SLKQ9H2G2 1235 aaPredicted RBP6.41□□□□□ -1.38
TPM1-222ENST00000560131 TMX1Q9H3N1 280 aa6.41□□□□□ -1.38
TPM1-222ENST00000560131 IFT57Q9NWB7 429 aa6.41□□□□□ -1.38
TPM1-222ENST00000560131 GPN3Q9UHW5 284 aaPredicted RBP6.41□□□□□ -1.38
TPM1-222ENST00000560131 CYP8B1Q9UNU6 501 aa6.41□□□□□ -1.38
TPM1-222ENST00000560131 MYOM1P52179 1685 aa6.41□□□□□ -1.38
TPM1-222ENST00000560131 A2MP01023 1474 aa6.41□□□□□ -1.38
TPM1-222ENST00000560131 DISP1Q96F81 1524 aa6.4□□□□□ -1.38
TPM1-222ENST00000560131 CCDC85CA6NKD9 419 aa6.4□□□□□ -1.38
TPM1-222ENST00000560131 PPP1R12AO14974 1030 aaPredicted RBP6.4□□□□□ -1.38
TPM1-222ENST00000560131 BNIP3LO60238 219 aa6.4□□□□□ -1.38
TPM1-222ENST00000560131 RAB11FIP3O75154 756 aa6.4□□□□□ -1.38
TPM1-222ENST00000560131 BMP6P22004 513 aa6.4□□□□□ -1.38
TPM1-222ENST00000560131 AMPD1P23109 780 aa6.4□□□□□ -1.38
TPM1-222ENST00000560131 PPP2R1AP30153 589 aa6.4□□□□□ -1.38
TPM1-222ENST00000560131 GATA4P43694 442 aa6.4□□□□□ -1.38
TPM1-222ENST00000560131 RIPK4P57078 832 aa6.4□□□□□ -1.38
TPM1-222ENST00000560131 RAB3GAP1Q15042 981 aa6.4□□□□□ -1.38
TPM1-222ENST00000560131 WDR43Q15061 677 aaKnown RBP eCLIP6.4□□□□□ -1.38
TPM1-222ENST00000560131 CWF19L2Q2TBE0 894 aaKnown RBP6.4□□□□□ -1.38
TPM1-222ENST00000560131 FILIP1Q7Z7B0 1213 aa6.4□□□□□ -1.38
TPM1-222ENST00000560131 REXO1Q8N1G1 1221 aaKnown RBP6.4□□□□□ -1.38
TPM1-222ENST00000560131 LILRB2Q8N423 598 aa6.4□□□□□ -1.38
TPM1-222ENST00000560131 FAM169BQ8N8A8 192 aa6.4□□□□□ -1.38
TPM1-222ENST00000560131 FBXO27Q8NI29 283 aa6.4□□□□□ -1.38
TPM1-222ENST00000560131 TRPM4Q8TD43 1214 aa6.4□□□□□ -1.38
TPM1-222ENST00000560131 SH3TC2Q8TF17 1288 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms