RNA–Protein interactions for RNA: ENST00000560046.1

DCAF11-227, Transcript of DDB1 and CUL4 associated factor 11, humanhuman

TSL 3

Gene DCAF11, Length 686 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCAF11-227ENST00000560046 USP17L12C9JPN9 530 aa12.32□□□□□ -0.44
DCAF11-227ENST00000560046 USP17L21D6R901 530 aa12.32□□□□□ -0.44
DCAF11-227ENST00000560046 SPTLC2O15270 562 aa12.32□□□□□ -0.44
DCAF11-227ENST00000560046 CAVIN2O95810 425 aa12.32□□□□□ -0.44
DCAF11-227ENST00000560046 LDHBP07195 334 aaKnown RBP12.32□□□□□ -0.44
DCAF11-227ENST00000560046 LDHCP07864 332 aa12.32□□□□□ -0.44
DCAF11-227ENST00000560046 SLC39A14Q15043 492 aa12.32□□□□□ -0.44
DCAF11-227ENST00000560046 STK38Q15208 465 aa12.32□□□□□ -0.44
DCAF11-227ENST00000560046 CCDC73Q6ZRK6 1079 aa12.32□□□□□ -0.44
DCAF11-227ENST00000560046 ZSCAN30Q86W11 494 aa12.32□□□□□ -0.44
DCAF11-227ENST00000560046 FSIP1Q8NA03 581 aa12.32□□□□□ -0.44
DCAF11-227ENST00000560046 FAM200AQ8TCP9 573 aa12.32□□□□□ -0.44
DCAF11-227ENST00000560046 MRPS27Q92552 414 aaKnown RBP12.32□□□□□ -0.44
DCAF11-227ENST00000560046 ZKSCAN3Q9BRR0 538 aa12.32□□□□□ -0.44
DCAF11-227ENST00000560046 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.32□□□□□ -0.44
DCAF11-227ENST00000560046 SLC26A6Q9BXS9 759 aa12.32□□□□□ -0.44
DCAF11-227ENST00000560046 GJB4Q9NTQ9 266 aa12.32□□□□□ -0.44
DCAF11-227ENST00000560046 AATFQ9NY61 560 aaKnown RBP eCLIP12.32□□□□□ -0.44
DCAF11-227ENST00000560046 MKRN1Q9UHC7 482 aaKnown RBP12.32□□□□□ -0.44
DCAF11-227ENST00000560046 CLIC4Q9Y696 253 aa12.32□□□□□ -0.44
DCAF11-227ENST00000560046 CYP2D7A0A087X1C5 515 aa12.31□□□□□ -0.44
DCAF11-227ENST00000560046 SMIM22K7EJ46 135 aa12.31□□□□□ -0.44
DCAF11-227ENST00000560046 DEXIO95424 95 aa12.31□□□□□ -0.44
DCAF11-227ENST00000560046 POLR3DP05423 398 aaPredicted RBP12.31□□□□□ -0.44
DCAF11-227ENST00000560046 SLC3A2P08195 630 aaKnown RBP12.31□□□□□ -0.44
DCAF11-227ENST00000560046 CALM1P0DP23 149 aa12.31□□□□□ -0.44
DCAF11-227ENST00000560046 CALM2P0DP24 149 aa12.31□□□□□ -0.44
DCAF11-227ENST00000560046 CALM3P0DP25 149 aa12.31□□□□□ -0.44
DCAF11-227ENST00000560046 ME1P48163 572 aa12.31□□□□□ -0.44
DCAF11-227ENST00000560046 TRIM29Q14134 588 aa12.31□□□□□ -0.44
DCAF11-227ENST00000560046 AXDND1Q5T1B0 1012 aaPredicted RBP12.31□□□□□ -0.44
DCAF11-227ENST00000560046 SLC51AQ86UW1 340 aa12.31□□□□□ -0.44
DCAF11-227ENST00000560046 DZIP1Q86YF9 867 aaKnown RBP12.31□□□□□ -0.44
DCAF11-227ENST00000560046 CERS3Q8IU89 383 aa12.31□□□□□ -0.44
DCAF11-227ENST00000560046 CCDC144CPQ8IYA2 1237 aa12.31□□□□□ -0.44
DCAF11-227ENST00000560046 TRIM22Q8IYM9 498 aa12.31□□□□□ -0.44
DCAF11-227ENST00000560046 FMR1NBQ8N0W7 255 aaPredicted RBP12.31□□□□□ -0.44
DCAF11-227ENST00000560046 ENAHQ8N8S7 591 aaPredicted RBP12.31□□□□□ -0.44
DCAF11-227ENST00000560046 ABHD8Q96I13 439 aa12.31□□□□□ -0.44
DCAF11-227ENST00000560046 RNF26Q9BY78 433 aaPredicted RBP12.31□□□□□ -0.44
DCAF11-227ENST00000560046 CD209Q9NNX6 404 aa12.31□□□□□ -0.44
DCAF11-227ENST00000560046 CCDC39Q9UFE4 941 aa12.31□□□□□ -0.44
DCAF11-227ENST00000560046 GGA1Q9UJY5 639 aa12.31□□□□□ -0.44
DCAF11-227ENST00000560046 COL11A2P13942 1736 aaPredicted RBP12.31□□□□□ -0.44
DCAF11-227ENST00000560046 FAM237AA0A1B0GTK4 181 aa12.3□□□□□ -0.44
DCAF11-227ENST00000560046 PPP6R2O75170 966 aa12.3□□□□□ -0.44
DCAF11-227ENST00000560046 DDAH1O94760 285 aa12.3□□□□□ -0.44
DCAF11-227ENST00000560046 UFL1O94874 794 aa12.3□□□□□ -0.44
DCAF11-227ENST00000560046 MMP1P03956 469 aa12.3□□□□□ -0.44
DCAF11-227ENST00000560046 RGS19P49795 217 aa12.3□□□□□ -0.44
DCAF11-227ENST00000560046 FUT2Q10981 343 aa12.3□□□□□ -0.44
DCAF11-227ENST00000560046 PTPAQ15257 358 aa12.3□□□□□ -0.44
DCAF11-227ENST00000560046 CAMK4Q16566 473 aa12.3□□□□□ -0.44
DCAF11-227ENST00000560046 IQCA1Q86XH1 822 aa12.3□□□□□ -0.44
DCAF11-227ENST00000560046 SP8Q8IXZ3 490 aa12.3□□□□□ -0.44
DCAF11-227ENST00000560046 CKAP2LQ8IYA6 745 aa12.3□□□□□ -0.44
DCAF11-227ENST00000560046 RBM28Q9NW13 759 aaKnown RBP12.3□□□□□ -0.44
DCAF11-227ENST00000560046 NOL7Q9UMY1 257 aaKnown RBP12.3□□□□□ -0.44
DCAF11-227ENST00000560046 MORC2Q9Y6X9 1032 aaPredicted RBP12.3□□□□□ -0.44
DCAF11-227ENST00000560046 MROH7-TTC4A0A0A0MT08 1334 aa12.3□□□□□ -0.44
DCAF11-227ENST00000560046 FAM205AQ6ZU69 1335 aa12.3□□□□□ -0.44
DCAF11-227ENST00000560046 FOXN1O15353 648 aa12.29□□□□□ -0.44
DCAF11-227ENST00000560046 PRPF3O43395 683 aaKnown RBP12.29□□□□□ -0.44
DCAF11-227ENST00000560046 CYP2D6P10635 497 aa12.29□□□□□ -0.44
DCAF11-227ENST00000560046 CMA1P23946 247 aa12.29□□□□□ -0.44
DCAF11-227ENST00000560046 GUCY1A2P33402 732 aa12.29□□□□□ -0.44
DCAF11-227ENST00000560046 TROAPQ12815 778 aa12.29□□□□□ -0.44
DCAF11-227ENST00000560046 C12orf60Q5U649 245 aa12.29□□□□□ -0.44
DCAF11-227ENST00000560046 SASS6Q6UVJ0 657 aa12.29□□□□□ -0.44
DCAF11-227ENST00000560046 CATIPQ7Z7H3 387 aa12.29□□□□□ -0.44
DCAF11-227ENST00000560046 TBC1D16Q8TBP0 767 aa12.29□□□□□ -0.44
DCAF11-227ENST00000560046 ANKS1AQ92625 1134 aa12.29□□□□□ -0.44
DCAF11-227ENST00000560046 FAM163AQ96GL9 167 aaPredicted RBP12.29□□□□□ -0.44
DCAF11-227ENST00000560046 MAP3K14Q99558 947 aa12.29□□□□□ -0.44
DCAF11-227ENST00000560046 FOXP1Q9H334 677 aaPredicted RBP12.29□□□□□ -0.44
DCAF11-227ENST00000560046 KINO60870 393 aaKnown RBP12.28□□□□□ -0.44
DCAF11-227ENST00000560046 ADCY5O95622 1261 aa12.28□□□□□ -0.44
DCAF11-227ENST00000560046 BAG3O95817 575 aa12.28□□□□□ -0.44
DCAF11-227ENST00000560046 PDE4BQ07343 736 aa12.28□□□□□ -0.44
DCAF11-227ENST00000560046 SF3A1Q15459 793 aaKnown RBP12.28□□□□□ -0.44
DCAF11-227ENST00000560046 GRIK5Q16478 980 aa12.28□□□□□ -0.44
DCAF11-227ENST00000560046 ANO6Q4KMQ2 910 aa12.28□□□□□ -0.44
DCAF11-227ENST00000560046 CCDC178Q5BJE1 867 aa12.28□□□□□ -0.44
DCAF11-227ENST00000560046 IFIT1BQ5T764 474 aaKnown RBP12.28□□□□□ -0.44
DCAF11-227ENST00000560046 STK11IPQ8N1F8 1099 aa12.28□□□□□ -0.44
DCAF11-227ENST00000560046 NLGN1Q8N2Q7 840 aa12.28□□□□□ -0.44
DCAF11-227ENST00000560046 FLAD1Q8NFF5 587 aa12.28□□□□□ -0.44
DCAF11-227ENST00000560046 RTFDC1Q9BY42 306 aaPredicted RBP12.28□□□□□ -0.44
DCAF11-227ENST00000560046 CBX8Q9HC52 389 aa12.28□□□□□ -0.44
DCAF11-227ENST00000560046 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.28□□□□□ -0.44
DCAF11-227ENST00000560046 USP25Q9UHP3 1055 aa12.28□□□□□ -0.44
DCAF11-227ENST00000560046 GPR75-ASB3A0A0A6YYF3 556 aa12.27□□□□□ -0.45
DCAF11-227ENST00000560046 UBE2Q2LH0YL09 131 aa12.27□□□□□ -0.45
DCAF11-227ENST00000560046 AP5Z1O43299 807 aa12.27□□□□□ -0.45
DCAF11-227ENST00000560046 PRDM1O75626 825 aa12.27□□□□□ -0.45
DCAF11-227ENST00000560046 SAFBQ15424 915 aaKnown RBP eCLIP12.27□□□□□ -0.45
DCAF11-227ENST00000560046 PKN1Q16512 942 aa12.27□□□□□ -0.45
DCAF11-227ENST00000560046 STX1AQ16623 288 aa12.27□□□□□ -0.45
DCAF11-227ENST00000560046 TMTC3Q6ZXV5 915 aa12.27□□□□□ -0.45
DCAF11-227ENST00000560046 NOSTRINQ8IVI9 506 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms