RNA–Protein interactions for RNA: ENST00000559604.1

KNSTRN-208, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 4

Gene KNSTRN, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-208ENST00000559604 DDX60LQ5H9U9 1706 aaKnown RBP23.19■■□□□ 1.3
KNSTRN-208ENST00000559604 PDE6AP16499 860 aa23.19■■□□□ 1.3
KNSTRN-208ENST00000559604 GRK4P32298 578 aa23.19■■□□□ 1.3
KNSTRN-208ENST00000559604 BACE1P56817 501 aa23.19■■□□□ 1.3
KNSTRN-208ENST00000559604 MTMR2Q13614 643 aa23.19■■□□□ 1.3
KNSTRN-208ENST00000559604 MTFR1Q15390 333 aa23.19■■□□□ 1.3
KNSTRN-208ENST00000559604 ANKRD13CQ8N6S4 541 aa23.19■■□□□ 1.3
KNSTRN-208ENST00000559604 DNAJC2Q99543 621 aaKnown RBP23.19■■□□□ 1.3
KNSTRN-208ENST00000559604 GINM1Q9NU53 330 aa23.19■■□□□ 1.3
KNSTRN-208ENST00000559604 ZBTB21Q9ULJ3 1066 aa23.19■■□□□ 1.3
KNSTRN-208ENST00000559604 GOLIM4O00461 696 aa23.18■■□□□ 1.3
KNSTRN-208ENST00000559604 PABPC4Q13310 644 aaKnown RBP eCLIP23.18■■□□□ 1.3
KNSTRN-208ENST00000559604 SLC9C2Q5TAH2 1124 aa23.18■■□□□ 1.3
KNSTRN-208ENST00000559604 NAV1Q8NEY1 1877 aa23.17■■□□□ 1.3
KNSTRN-208ENST00000559604 MAGEB6P1A0A0J9YX57 407 aa23.17■■□□□ 1.3
KNSTRN-208ENST00000559604 FAM110CQ1W6H9 321 aa23.17■■□□□ 1.3
KNSTRN-208ENST00000559604 EDC3Q96F86 508 aaKnown RBP23.17■■□□□ 1.3
KNSTRN-208ENST00000559604 ASCC2Q9H1I8 757 aaPredicted RBP23.17■■□□□ 1.3
KNSTRN-208ENST00000559604 EHD4Q9H223 541 aa23.17■■□□□ 1.3
KNSTRN-208ENST00000559604 ZNF532Q9HCE3 1301 aa23.16■■□□□ 1.3
KNSTRN-208ENST00000559604 TCRBV5S4A2TA0A5A2 114 aa23.16■■□□□ 1.3
KNSTRN-208ENST00000559604 TNPO2O14787 897 aaKnown RBP23.16■■□□□ 1.3
KNSTRN-208ENST00000559604 FLT3LGP49771 235 aa23.16■■□□□ 1.3
KNSTRN-208ENST00000559604 TATDN1Q6P1N9 297 aa23.16■■□□□ 1.3
KNSTRN-208ENST00000559604 SERPINB13Q9UIV8 391 aa23.16■■□□□ 1.3
KNSTRN-208ENST00000559604 C19orf81C9J6K1 198 aa23.15■■□□□ 1.3
KNSTRN-208ENST00000559604 USP17L10C9JJH3 530 aa23.15■■□□□ 1.3
KNSTRN-208ENST00000559604 GCLCP48506 637 aaPredicted RBP23.15■■□□□ 1.3
KNSTRN-208ENST00000559604 TTC6Q86TZ1 520 aa23.15■■□□□ 1.3
KNSTRN-208ENST00000559604 TMOD4Q9NZQ9 345 aa23.15■■□□□ 1.3
KNSTRN-208ENST00000559604 GH2P01242 217 aa23.14■■□□□ 1.29
KNSTRN-208ENST00000559604 ATP5JP18859 108 aa23.14■■□□□ 1.29
KNSTRN-208ENST00000559604 HOXA7P31268 230 aaPredicted RBP23.14■■□□□ 1.29
KNSTRN-208ENST00000559604 PLCD1P51178 756 aa23.14■■□□□ 1.29
KNSTRN-208ENST00000559604 SLAIN1Q8ND83 568 aa23.14■■□□□ 1.29
KNSTRN-208ENST00000559604 BOLA2Q9H3K6 86 aa23.14■■□□□ 1.29
KNSTRN-208ENST00000559604 PAG1Q9NWQ8 432 aa23.14■■□□□ 1.29
KNSTRN-208ENST00000559604 ADCY3O60266 1144 aa23.13■■□□□ 1.29
KNSTRN-208ENST00000559604 CRNKL1Q9BZJ0 848 aaKnown RBP23.13■■□□□ 1.29
KNSTRN-208ENST00000559604 MYH7P12883 1935 aa23.13■■□□□ 1.29
KNSTRN-208ENST00000559604 CCL5P13501 91 aa23.12■■□□□ 1.29
KNSTRN-208ENST00000559604 IRF5Q13568 498 aa23.12■■□□□ 1.29
KNSTRN-208ENST00000559604 LCORLQ8N3X6 602 aa23.12■■□□□ 1.29
KNSTRN-208ENST00000559604 SHISA4Q96DD7 197 aa23.12■■□□□ 1.29
KNSTRN-208ENST00000559604 LRRCC1Q9C099 1032 aa23.12■■□□□ 1.29
KNSTRN-208ENST00000559604 BIN2Q9UBW5 565 aaPredicted RBP23.12■■□□□ 1.29
KNSTRN-208ENST00000559604 SMARCA5O60264 1052 aaPredicted RBP23.11■■□□□ 1.29
KNSTRN-208ENST00000559604 SLC34A2O95436 690 aa23.11■■□□□ 1.29
KNSTRN-208ENST00000559604 ELNP15502 786 aa23.11■■□□□ 1.29
KNSTRN-208ENST00000559604 SHMT1P34896 483 aa23.11■■□□□ 1.29
KNSTRN-208ENST00000559604 UBXN2AP68543 259 aa23.11■■□□□ 1.29
KNSTRN-208ENST00000559604 IRX3P78415 501 aaPredicted RBP23.11■■□□□ 1.29
KNSTRN-208ENST00000559604 EVX2Q03828 476 aa23.11■■□□□ 1.29
KNSTRN-208ENST00000559604 SLFNL1Q499Z3 407 aa23.11■■□□□ 1.29
KNSTRN-208ENST00000559604 CERKLQ49MI3 558 aaPredicted RBP23.11■■□□□ 1.29
KNSTRN-208ENST00000559604 PXYLP1Q8TE99 480 aa23.11■■□□□ 1.29
KNSTRN-208ENST00000559604 COA7Q96BR5 231 aa23.11■■□□□ 1.29
KNSTRN-208ENST00000559604 P2RX7Q99572 595 aaKnown RBP23.11■■□□□ 1.29
KNSTRN-208ENST00000559604 HAUS7Q99871 368 aa23.11■■□□□ 1.29
KNSTRN-208ENST00000559604 EMILIN3Q9NT22 766 aa23.11■■□□□ 1.29
KNSTRN-208ENST00000559604 MORF4L1Q9UBU8 362 aa23.11■■□□□ 1.29
KNSTRN-208ENST00000559604 POLR3DP05423 398 aaPredicted RBP23.1■■□□□ 1.29
KNSTRN-208ENST00000559604 ADD2P35612 726 aa23.1■■□□□ 1.29
KNSTRN-208ENST00000559604 GABPAQ06546 454 aa23.1■■□□□ 1.29
KNSTRN-208ENST00000559604 SDR42E1Q8WUS8 393 aa23.1■■□□□ 1.29
KNSTRN-208ENST00000559604 RNF208Q9H0X6 261 aa23.1■■□□□ 1.29
KNSTRN-208ENST00000559604 MCM9Q9NXL9 1143 aa23.1■■□□□ 1.29
KNSTRN-208ENST00000559604 PEX10O60683 326 aa23.09■■□□□ 1.29
KNSTRN-208ENST00000559604 GJB1P08034 283 aa23.09■■□□□ 1.29
KNSTRN-208ENST00000559604 HERVK_113P62684 666 aa23.09■■□□□ 1.29
KNSTRN-208ENST00000559604 ABCB5Q2M3G0 1257 aa23.09■■□□□ 1.29
KNSTRN-208ENST00000559604 USP17L2Q6R6M4 530 aa23.09■■□□□ 1.29
KNSTRN-208ENST00000559604 UNC93B1Q9H1C4 597 aa23.09■■□□□ 1.29
KNSTRN-208ENST00000559604 ARMT1Q9H993 441 aa23.09■■□□□ 1.29
KNSTRN-208ENST00000559604 TXNRD2Q9NNW7 524 aa23.09■■□□□ 1.29
KNSTRN-208ENST00000559604 DCP1AQ9NPI6 582 aaPredicted RBP23.09■■□□□ 1.29
KNSTRN-208ENST00000559604 PLXNB2O15031 1838 aa23.09■■□□□ 1.29
KNSTRN-208ENST00000559604 BAZ2AQ9UIF9 1905 aaKnown RBP23.08■■□□□ 1.29
KNSTRN-208ENST00000559604 CHGBP05060 677 aa23.08■■□□□ 1.29
KNSTRN-208ENST00000559604 GJA8P48165 433 aa23.08■■□□□ 1.29
KNSTRN-208ENST00000559604 RAB3GAP1Q15042 981 aa23.08■■□□□ 1.29
KNSTRN-208ENST00000559604 C12orf42Q96LP6 360 aa23.08■■□□□ 1.29
KNSTRN-208ENST00000559604 INHAP05111 366 aa23.07■■□□□ 1.28
KNSTRN-208ENST00000559604 GUCY1A2P33402 732 aa23.07■■□□□ 1.28
KNSTRN-208ENST00000559604 NKX2-3Q8TAU0 364 aa23.07■■□□□ 1.28
KNSTRN-208ENST00000559604 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.07■■□□□ 1.28
KNSTRN-208ENST00000559604 DCTPP1Q9H773 170 aa23.07■■□□□ 1.28
KNSTRN-208ENST00000559604 RBPJLQ9UBG7 517 aa23.07■■□□□ 1.28
KNSTRN-208ENST00000559604 GJD2Q9UKL4 321 aa23.07■■□□□ 1.28
KNSTRN-208ENST00000559604 TAOK2Q9UL54 1235 aa23.07■■□□□ 1.28
KNSTRN-208ENST00000559604 PRKAB2O43741 272 aa23.06■■□□□ 1.28
KNSTRN-208ENST00000559604 MBD4O95243 580 aa23.06■■□□□ 1.28
KNSTRN-208ENST00000559604 CYP2D6P10635 497 aa23.06■■□□□ 1.28
KNSTRN-208ENST00000559604 ZYXQ15942 572 aaKnown RBP23.06■■□□□ 1.28
KNSTRN-208ENST00000559604 POTEEQ6S8J3 1075 aa23.06■■□□□ 1.28
KNSTRN-208ENST00000559604 ACER1Q8TDN7 264 aa23.06■■□□□ 1.28
KNSTRN-208ENST00000559604 FEZ1Q99689 392 aa23.06■■□□□ 1.28
KNSTRN-208ENST00000559604 CABP5Q9NP86 173 aa23.06■■□□□ 1.28
KNSTRN-208ENST00000559604 MYH8P13535 1937 aa23.06■■□□□ 1.28
KNSTRN-208ENST00000559604 CEP290O15078 2479 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms