RNA–Protein interactions for RNA: ENST00000559566.5

SHF-205, Transcript of Src homology 2 domain containing F, humanhuman

TSL 1 (best)

Gene SHF, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-205ENST00000559566 GTF2A2P52657 109 aa23.36■■□□□ 1.33
SHF-205ENST00000559566 CCL15Q16663 113 aa23.36■■□□□ 1.33
SHF-205ENST00000559566 SBK1Q52WX2 424 aa23.36■■□□□ 1.33
SHF-205ENST00000559566 TICAM2Q86XR7 235 aa23.36■■□□□ 1.33
SHF-205ENST00000559566 REM2Q8IYK8 340 aaPredicted RBP23.36■■□□□ 1.33
SHF-205ENST00000559566 R3HDMLQ9H3Y0 253 aa23.36■■□□□ 1.33
SHF-205ENST00000559566 ZBTB21Q9ULJ3 1066 aa23.36■■□□□ 1.33
SHF-205ENST00000559566 APPP05067 770 aa23.35■■□□□ 1.33
SHF-205ENST00000559566 FAM43AQ8N2R8 423 aa23.35■■□□□ 1.33
SHF-205ENST00000559566 PPP4R2Q9NY27 417 aa23.35■■□□□ 1.33
SHF-205ENST00000559566 ARPP21Q9UBL0 812 aaPredicted RBP23.35■■□□□ 1.33
SHF-205ENST00000559566 PHIPQ8WWQ0 1821 aa23.34■■□□□ 1.33
SHF-205ENST00000559566 GH2P01242 217 aa23.34■■□□□ 1.33
SHF-205ENST00000559566 GUCY1A2P33402 732 aa23.34■■□□□ 1.33
SHF-205ENST00000559566 TDO2P48775 406 aa23.34■■□□□ 1.33
SHF-205ENST00000559566 LBX1P52954 281 aa23.34■■□□□ 1.33
SHF-205ENST00000559566 SNAPC2Q13487 334 aa23.34■■□□□ 1.33
SHF-205ENST00000559566 DGKZQ13574 1117 aa23.34■■□□□ 1.33
SHF-205ENST00000559566 CWC27Q6UX04 472 aaKnown RBP23.34■■□□□ 1.33
SHF-205ENST00000559566 C16orf86Q6ZW13 317 aa23.34■■□□□ 1.33
SHF-205ENST00000559566 STK11IPQ8N1F8 1099 aa23.34■■□□□ 1.33
SHF-205ENST00000559566 DDRGK1Q96HY6 314 aa23.34■■□□□ 1.33
SHF-205ENST00000559566 BEGAINQ9BUH8 593 aa23.34■■□□□ 1.33
SHF-205ENST00000559566 CCDC171Q6TFL3 1326 aa23.33■■□□□ 1.33
SHF-205ENST00000559566 TRIM75PA6NK02 468 aa23.33■■□□□ 1.33
SHF-205ENST00000559566 MINDY4BA8MYZ0 360 aa23.33■■□□□ 1.33
SHF-205ENST00000559566 CDK8P49336 464 aa23.33■■□□□ 1.33
SHF-205ENST00000559566 CERKLQ49MI3 558 aaPredicted RBP23.33■■□□□ 1.33
SHF-205ENST00000559566 ERICH6BQ5W0A0 696 aa23.33■■□□□ 1.33
SHF-205ENST00000559566 DIAPH3Q9NSV4 1193 aa23.33■■□□□ 1.33
SHF-205ENST00000559566 ROBO3Q96MS0 1386 aa23.32■■□□□ 1.32
SHF-205ENST00000559566 ATAD5Q96QE3 1844 aa23.32■■□□□ 1.32
SHF-205ENST00000559566 USP17L5A8MUK1 530 aa23.32■■□□□ 1.32
SHF-205ENST00000559566 BTBD19C9JJ37 291 aa23.32■■□□□ 1.32
SHF-205ENST00000559566 CXCL11O14625 94 aa23.32■■□□□ 1.32
SHF-205ENST00000559566 TBC1D8O95759 1140 aa23.32■■□□□ 1.32
SHF-205ENST00000559566 ASNSP08243 561 aa23.32■■□□□ 1.32
SHF-205ENST00000559566 CETPP11597 493 aa23.32■■□□□ 1.32
SHF-205ENST00000559566 CTCFP49711 727 aaPredicted RBP23.32■■□□□ 1.32
SHF-205ENST00000559566 INHBEP58166 350 aa23.32■■□□□ 1.32
SHF-205ENST00000559566 SAGE1Q9NXZ1 904 aa23.32■■□□□ 1.32
SHF-205ENST00000559566 A0A0G2JLL6 359 aaPredicted RBP23.31■■□□□ 1.32
SHF-205ENST00000559566 HSPD1P10809 573 aaKnown RBP23.31■■□□□ 1.32
SHF-205ENST00000559566 AKR1B1P15121 316 aa23.31■■□□□ 1.32
SHF-205ENST00000559566 SPP2Q13103 211 aa23.31■■□□□ 1.32
SHF-205ENST00000559566 ABCB5Q2M3G0 1257 aa23.31■■□□□ 1.32
SHF-205ENST00000559566 GPAT2Q6NUI2 795 aa23.31■■□□□ 1.32
SHF-205ENST00000559566 PRRT2Q7Z6L0 340 aaPredicted RBP23.31■■□□□ 1.32
SHF-205ENST00000559566 NAPBQ9H115 298 aa23.31■■□□□ 1.32
SHF-205ENST00000559566 SWAP70Q9UH65 585 aa23.31■■□□□ 1.32
SHF-205ENST00000559566 TACC3Q9Y6A5 838 aa23.31■■□□□ 1.32
SHF-205ENST00000559566 CA12O43570 354 aa23.3■■□□□ 1.32
SHF-205ENST00000559566 CHMLP26374 656 aa23.3■■□□□ 1.32
SHF-205ENST00000559566 AMOTL1Q8IY63 956 aa23.3■■□□□ 1.32
SHF-205ENST00000559566 ZNF280CQ8ND82 737 aa23.3■■□□□ 1.32
SHF-205ENST00000559566 NACAP1Q9BZK3 213 aa23.3■■□□□ 1.32
SHF-205ENST00000559566 HIP1O00291 1037 aa23.29■■□□□ 1.32
SHF-205ENST00000559566 SEPT2Q15019 361 aa23.29■■□□□ 1.32
SHF-205ENST00000559566 CLEC10AQ8IUN9 316 aa23.29■■□□□ 1.32
SHF-205ENST00000559566 WDR18Q9BV38 432 aa23.29■■□□□ 1.32
SHF-205ENST00000559566 FGAP02671 866 aa23.28■■□□□ 1.32
SHF-205ENST00000559566 PPARAQ07869 468 aa23.28■■□□□ 1.32
SHF-205ENST00000559566 ALX1Q15699 326 aa23.28■■□□□ 1.32
SHF-205ENST00000559566 ACER1Q8TDN7 264 aa23.28■■□□□ 1.32
SHF-205ENST00000559566 INCENPQ9NQS7 918 aa23.28■■□□□ 1.32
SHF-205ENST00000559566 GINM1Q9NU53 330 aa23.28■■□□□ 1.32
SHF-205ENST00000559566 RASA1P20936 1047 aa23.27■■□□□ 1.32
SHF-205ENST00000559566 CTDSPL2Q05D32 466 aa23.27■■□□□ 1.32
SHF-205ENST00000559566 CRHR2Q13324 411 aa23.27■■□□□ 1.32
SHF-205ENST00000559566 MTMR2Q13614 643 aa23.27■■□□□ 1.32
SHF-205ENST00000559566 RAB3GAP1Q15042 981 aa23.27■■□□□ 1.32
SHF-205ENST00000559566 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.27■■□□□ 1.32
SHF-205ENST00000559566 CFHR5Q9BXR6 569 aa23.27■■□□□ 1.32
SHF-205ENST00000559566 MPHOSPH10O00566 681 aaKnown RBP23.26■■□□□ 1.31
SHF-205ENST00000559566 PRDM1O75626 825 aa23.26■■□□□ 1.31
SHF-205ENST00000559566 HMGCS2P54868 508 aa23.26■■□□□ 1.31
SHF-205ENST00000559566 TREML2Q5T2D2 321 aa23.26■■□□□ 1.31
SHF-205ENST00000559566 GADL1Q6ZQY3 521 aa23.26■■□□□ 1.31
SHF-205ENST00000559566 ANKRD23Q86SG2 305 aa23.26■■□□□ 1.31
SHF-205ENST00000559566 SIAH1Q8IUQ4 282 aa23.26■■□□□ 1.31
SHF-205ENST00000559566 AS3MTQ9HBK9 375 aa23.26■■□□□ 1.31
SHF-205ENST00000559566 ALDH1A1P00352 501 aa23.25■■□□□ 1.31
SHF-205ENST00000559566 BMP2KLQ5H9B9 411 aa23.25■■□□□ 1.31
SHF-205ENST00000559566 SH3D19Q5HYK7 790 aa23.25■■□□□ 1.31
SHF-205ENST00000559566 TBC1D2Q9BYX2 928 aa23.25■■□□□ 1.31
SHF-205ENST00000559566 CABP5Q9NP86 173 aa23.25■■□□□ 1.31
SHF-205ENST00000559566 TAOK2Q9UL54 1235 aa23.25■■□□□ 1.31
SHF-205ENST00000559566 PTPRFP10586 1907 aa23.24■■□□□ 1.31
SHF-205ENST00000559566 A0A1W2PRG0 241 aa23.24■■□□□ 1.31
SHF-205ENST00000559566 PDHXO00330 501 aa23.24■■□□□ 1.31
SHF-205ENST00000559566 BACE1P56817 501 aa23.24■■□□□ 1.31
SHF-205ENST00000559566 TAF1CQ15572 869 aaPredicted RBP23.24■■□□□ 1.31
SHF-205ENST00000559566 COL13A1Q5TAT6 717 aaPredicted RBP23.24■■□□□ 1.31
SHF-205ENST00000559566 TMEM179Q6ZVK1 233 aa23.24■■□□□ 1.31
SHF-205ENST00000559566 CCDC17Q96LX7 622 aa23.24■■□□□ 1.31
SHF-205ENST00000559566 NBPF3Q9H094 633 aa23.24■■□□□ 1.31
SHF-205ENST00000559566 PRDM10Q9NQV6 1147 aa23.24■■□□□ 1.31
SHF-205ENST00000559566 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.24■■□□□ 1.31
SHF-205ENST00000559566 HAND2P61296 217 aa23.23■■□□□ 1.31
SHF-205ENST00000559566 OTUD7BQ6GQQ9 843 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms