RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 PNMA3Q9UL41 463 aa5.25□□□□□ -1.57
SNX1-205ENST00000559339 SLC45A1Q9Y2W3 748 aa5.25□□□□□ -1.57
SNX1-205ENST00000559339 SLC4A4Q9Y6R1 1079 aa5.25□□□□□ -1.57
SNX1-205ENST00000559339 MYH2Q9UKX2 1941 aa5.25□□□□□ -1.57
SNX1-205ENST00000559339 CCDC85CA6NKD9 419 aa5.24□□□□□ -1.57
SNX1-205ENST00000559339 TRIM6-TRIM34B2RNG4 842 aa5.24□□□□□ -1.57
SNX1-205ENST00000559339 USP17L10C9JJH3 530 aa5.24□□□□□ -1.57
SNX1-205ENST00000559339 MPHOSPH10O00566 681 aaKnown RBP5.24□□□□□ -1.57
SNX1-205ENST00000559339 GDF11O95390 407 aa5.24□□□□□ -1.57
SNX1-205ENST00000559339 GNRH1P01148 92 aa5.24□□□□□ -1.57
SNX1-205ENST00000559339 GH2P01242 217 aa5.24□□□□□ -1.57
SNX1-205ENST00000559339 SLC3A2P08195 630 aaKnown RBP5.24□□□□□ -1.57
SNX1-205ENST00000559339 OSBPP22059 807 aa5.24□□□□□ -1.57
SNX1-205ENST00000559339 HOXD10P28358 340 aa5.24□□□□□ -1.57
SNX1-205ENST00000559339 PLCD1P51178 756 aa5.24□□□□□ -1.57
SNX1-205ENST00000559339 USP14P54578 494 aa5.24□□□□□ -1.57
SNX1-205ENST00000559339 PDE1AP54750 535 aa5.24□□□□□ -1.57
SNX1-205ENST00000559339 HMGCS2P54868 508 aa5.24□□□□□ -1.57
SNX1-205ENST00000559339 BACE1P56817 501 aa5.24□□□□□ -1.57
SNX1-205ENST00000559339 ABCB5Q2M3G0 1257 aa5.24□□□□□ -1.57
SNX1-205ENST00000559339 TATDN1Q6P1N9 297 aa5.24□□□□□ -1.57
SNX1-205ENST00000559339 GIMAP6Q6P9H5 292 aa5.24□□□□□ -1.57
SNX1-205ENST00000559339 CHD1LQ86WJ1 897 aa5.24□□□□□ -1.57
SNX1-205ENST00000559339 SMC5Q8IY18 1101 aa5.24□□□□□ -1.57
SNX1-205ENST00000559339 LCORLQ8N3X6 602 aa5.24□□□□□ -1.57
SNX1-205ENST00000559339 PROCA1Q8NCQ7 364 aaPredicted RBP5.24□□□□□ -1.57
SNX1-205ENST00000559339 PI4K2BQ8TCG2 481 aa5.24□□□□□ -1.57
SNX1-205ENST00000559339 FEZ1Q99689 392 aa5.24□□□□□ -1.57
SNX1-205ENST00000559339 WDR18Q9BV38 432 aa5.24□□□□□ -1.57
SNX1-205ENST00000559339 LNPKQ9C0E8 428 aa5.24□□□□□ -1.57
SNX1-205ENST00000559339 PUS7LQ9H0K6 701 aaKnown RBP5.24□□□□□ -1.57
SNX1-205ENST00000559339 ARPP21Q9UBL0 812 aaPredicted RBP5.24□□□□□ -1.57
SNX1-205ENST00000559339 STAP2Q9UGK3 403 aa5.24□□□□□ -1.57
SNX1-205ENST00000559339 ZBTB21Q9ULJ3 1066 aa5.24□□□□□ -1.57
SNX1-205ENST00000559339 AGTPBP1Q9UPW5 1226 aa5.24□□□□□ -1.57
SNX1-205ENST00000559339 TRIM17Q9Y577 477 aa5.24□□□□□ -1.57
SNX1-205ENST00000559339 AK9Q5TCS8 1911 aa5.23□□□□□ -1.57
SNX1-205ENST00000559339 PATL2C9JE40 543 aaKnown RBP5.23□□□□□ -1.57
SNX1-205ENST00000559339 USP17L12C9JPN9 530 aa5.23□□□□□ -1.57
SNX1-205ENST00000559339 USP17L21D6R901 530 aa5.23□□□□□ -1.57
SNX1-205ENST00000559339 GPAA1O43292 621 aa5.23□□□□□ -1.57
SNX1-205ENST00000559339 IGHDP01880 384 aa5.23□□□□□ -1.57
SNX1-205ENST00000559339 SLURP2P0DP57 97 aa5.23□□□□□ -1.57
SNX1-205ENST00000559339 CYP2C8P10632 490 aa5.23□□□□□ -1.57
SNX1-205ENST00000559339 TDO2P48775 406 aa5.23□□□□□ -1.57
SNX1-205ENST00000559339 MFAP1P55081 439 aaKnown RBP5.23□□□□□ -1.57
SNX1-205ENST00000559339 IRX3P78415 501 aaPredicted RBP5.23□□□□□ -1.57
SNX1-205ENST00000559339 LACTBP83111 547 aaPredicted RBP5.23□□□□□ -1.57
SNX1-205ENST00000559339 NUCB1Q02818 461 aa5.23□□□□□ -1.57
SNX1-205ENST00000559339 MTMR2Q13614 643 aa5.23□□□□□ -1.57
SNX1-205ENST00000559339 SH3D19Q5HYK7 790 aa5.23□□□□□ -1.57
SNX1-205ENST00000559339 FBXO46Q6PJ61 603 aaPredicted RBP5.23□□□□□ -1.57
SNX1-205ENST00000559339 TMEM179Q6ZVK1 233 aa5.23□□□□□ -1.57
SNX1-205ENST00000559339 NBPF11Q86T75 865 aa5.23□□□□□ -1.57
SNX1-205ENST00000559339 CCAR1Q8IX12 1150 aaKnown RBP5.23□□□□□ -1.57
SNX1-205ENST00000559339 OTUD7AQ8TE49 926 aaPredicted RBP5.23□□□□□ -1.57
SNX1-205ENST00000559339 OSBP2Q969R2 916 aa5.23□□□□□ -1.57
SNX1-205ENST00000559339 RILPL2Q969X0 211 aa5.23□□□□□ -1.57
SNX1-205ENST00000559339 CCDC17Q96LX7 622 aa5.23□□□□□ -1.57
SNX1-205ENST00000559339 STRBPQ96SI9 672 aaKnown RBP5.23□□□□□ -1.57
SNX1-205ENST00000559339 R3HDMLQ9H3Y0 253 aa5.23□□□□□ -1.57
SNX1-205ENST00000559339 SH2D4AQ9H788 454 aa5.23□□□□□ -1.57
SNX1-205ENST00000559339 DNAJC18Q9H819 358 aa5.23□□□□□ -1.57
SNX1-205ENST00000559339 EFCC1Q9HA90 598 aa5.23□□□□□ -1.57
SNX1-205ENST00000559339 MKNK2Q9HBH9 465 aa5.23□□□□□ -1.57
SNX1-205ENST00000559339 CPA4Q9UI42 421 aa5.23□□□□□ -1.57
SNX1-205ENST00000559339 AKAP11Q9UKA4 1901 aa5.23□□□□□ -1.57
SNX1-205ENST00000559339 MINDY4BA8MYZ0 360 aa5.22□□□□□ -1.57
SNX1-205ENST00000559339 HIP1O00291 1037 aa5.22□□□□□ -1.57
SNX1-205ENST00000559339 PRKAB2O43741 272 aa5.22□□□□□ -1.57
SNX1-205ENST00000559339 FMNL1O95466 1100 aaPredicted RBP5.22□□□□□ -1.57
SNX1-205ENST00000559339 HOXA7P31268 230 aaPredicted RBP5.22□□□□□ -1.57
SNX1-205ENST00000559339 SHMT1P34896 483 aa5.22□□□□□ -1.57
SNX1-205ENST00000559339 GCLCP48506 637 aaPredicted RBP5.22□□□□□ -1.57
SNX1-205ENST00000559339 PRMT2P55345 433 aa5.22□□□□□ -1.57
SNX1-205ENST00000559339 FCGRTP55899 365 aa5.22□□□□□ -1.57
SNX1-205ENST00000559339 IRX6P78412 446 aaPredicted RBP5.22□□□□□ -1.57
SNX1-205ENST00000559339 GABPAQ06546 454 aa5.22□□□□□ -1.57
SNX1-205ENST00000559339 PDE4BQ07343 736 aa5.22□□□□□ -1.57
SNX1-205ENST00000559339 SLFNL1Q499Z3 407 aa5.22□□□□□ -1.57
SNX1-205ENST00000559339 MCMDC2Q4G0Z9 681 aa5.22□□□□□ -1.57
SNX1-205ENST00000559339 SBK1Q52WX2 424 aa5.22□□□□□ -1.57
SNX1-205ENST00000559339 C12orf60Q5U649 245 aa5.22□□□□□ -1.57
SNX1-205ENST00000559339 GPAT2Q6NUI2 795 aa5.22□□□□□ -1.57
SNX1-205ENST00000559339 CTR9Q6PD62 1173 aa5.22□□□□□ -1.57
SNX1-205ENST00000559339 USP17L2Q6R6M4 530 aa5.22□□□□□ -1.57
SNX1-205ENST00000559339 C17orf99Q6UX52 265 aa5.22□□□□□ -1.57
SNX1-205ENST00000559339 C16orf86Q6ZW13 317 aa5.22□□□□□ -1.57
SNX1-205ENST00000559339 OTOP1Q7RTM1 612 aa5.22□□□□□ -1.57
SNX1-205ENST00000559339 CCDC84Q86UT8 332 aaPredicted RBP5.22□□□□□ -1.57
SNX1-205ENST00000559339 ZNF444Q8N0Y2 327 aaPredicted RBP5.22□□□□□ -1.57
SNX1-205ENST00000559339 ANKRD13CQ8N6S4 541 aa5.22□□□□□ -1.57
SNX1-205ENST00000559339 CD99L2Q8TCZ2 262 aa5.22□□□□□ -1.57
SNX1-205ENST00000559339 GTF3C2Q8WUA4 911 aaPredicted RBP5.22□□□□□ -1.57
SNX1-205ENST00000559339 NAPBQ9H115 298 aa5.22□□□□□ -1.57
SNX1-205ENST00000559339 OSBPL3Q9H4L5 887 aa5.22□□□□□ -1.57
SNX1-205ENST00000559339 KANSL2Q9H9L4 492 aa5.22□□□□□ -1.57
SNX1-205ENST00000559339 ARHGEF10LQ9HCE6 1279 aa5.22□□□□□ -1.57
SNX1-205ENST00000559339 HELLSQ9NRZ9 838 aa5.22□□□□□ -1.57
SNX1-205ENST00000559339 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms