RNA–Protein interactions for RNA: ENST00000559016.1

COPS2-206, Transcript of COP9 signalosome subunit 2, humanhuman

TSL 4

Gene COPS2, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS2-206ENST00000559016 BRPF3Q9ULD4 1205 aa10.02□□□□□ -0.81
COPS2-206ENST00000559016 HPS5Q9UPZ3 1129 aa10.02□□□□□ -0.81
COPS2-206ENST00000559016 PCDHGA4Q9Y5G9 962 aa10.02□□□□□ -0.81
COPS2-206ENST00000559016 STK36Q9NRP7 1315 aa10.02□□□□□ -0.81
COPS2-206ENST00000559016 KIF13BQ9NQT8 1826 aa10.01□□□□□ -0.81
COPS2-206ENST00000559016 CCDC69A6NI79 296 aa10.01□□□□□ -0.81
COPS2-206ENST00000559016 MINDY4BA8MYZ0 360 aa10.01□□□□□ -0.81
COPS2-206ENST00000559016 USP17L12C9JPN9 530 aa10.01□□□□□ -0.81
COPS2-206ENST00000559016 USP17L21D6R901 530 aa10.01□□□□□ -0.81
COPS2-206ENST00000559016 JAK2O60674 1132 aa10.01□□□□□ -0.81
COPS2-206ENST00000559016 CALM1P0DP23 149 aa10.01□□□□□ -0.81
COPS2-206ENST00000559016 CALM2P0DP24 149 aa10.01□□□□□ -0.81
COPS2-206ENST00000559016 CALM3P0DP25 149 aa10.01□□□□□ -0.81
COPS2-206ENST00000559016 METAP2P50579 478 aaKnown RBP eCLIP10.01□□□□□ -0.81
COPS2-206ENST00000559016 CCT2P78371 535 aaKnown RBP10.01□□□□□ -0.81
COPS2-206ENST00000559016 EN1Q05925 392 aaPredicted RBP10.01□□□□□ -0.81
COPS2-206ENST00000559016 PDE4BQ07343 736 aa10.01□□□□□ -0.81
COPS2-206ENST00000559016 WTAPQ15007 396 aa10.01□□□□□ -0.81
COPS2-206ENST00000559016 FOXD4L5Q5VV16 416 aaPredicted RBP10.01□□□□□ -0.81
COPS2-206ENST00000559016 PODNQ7Z5L7 613 aa10.01□□□□□ -0.81
COPS2-206ENST00000559016 IQCA1Q86XH1 822 aa10.01□□□□□ -0.81
COPS2-206ENST00000559016 C2CD5Q86YS7 1000 aa10.01□□□□□ -0.81
COPS2-206ENST00000559016 FOXD4L4Q8WXT5 416 aaPredicted RBP10.01□□□□□ -0.81
COPS2-206ENST00000559016 WASF1Q92558 559 aa10.01□□□□□ -0.81
COPS2-206ENST00000559016 UBAC1Q9BSL1 405 aa10.01□□□□□ -0.81
COPS2-206ENST00000559016 MRIQ9BWK5 157 aa10.01□□□□□ -0.81
COPS2-206ENST00000559016 RTFDC1Q9BY42 306 aaPredicted RBP10.01□□□□□ -0.81
COPS2-206ENST00000559016 ZNF287Q9HBT7 754 aa10.01□□□□□ -0.81
COPS2-206ENST00000559016 AATFQ9NY61 560 aaKnown RBP eCLIP10.01□□□□□ -0.81
COPS2-206ENST00000559016 MKRN1Q9UHC7 482 aaKnown RBP10.01□□□□□ -0.81
COPS2-206ENST00000559016 CFAP45Q9UL16 551 aa10.01□□□□□ -0.81
COPS2-206ENST00000559016 LHX6Q9UPM6 363 aa10.01□□□□□ -0.81
COPS2-206ENST00000559016 SLC12A7Q9Y666 1083 aa10.01□□□□□ -0.81
COPS2-206ENST00000559016 MYH1P12882 1939 aa10.01□□□□□ -0.81
COPS2-206ENST00000559016 GAKO14976 1311 aa10.01□□□□□ -0.81
COPS2-206ENST00000559016 ROBO3Q96MS0 1386 aa10.01□□□□□ -0.81
COPS2-206ENST00000559016 MYH6P13533 1939 aa10□□□□□ -0.81
COPS2-206ENST00000559016 FSD2A1L4K1 749 aa10□□□□□ -0.81
COPS2-206ENST00000559016 KIF3CO14782 793 aa10□□□□□ -0.81
COPS2-206ENST00000559016 LETM1O95202 739 aaPredicted RBP10□□□□□ -0.81
COPS2-206ENST00000559016 ZNF445P59923 1031 aa10□□□□□ -0.81
COPS2-206ENST00000559016 MFSD14BQ5SR56 506 aa10□□□□□ -0.81
COPS2-206ENST00000559016 NFXL1Q6ZNB6 911 aa10□□□□□ -0.81
COPS2-206ENST00000559016 CDC37L1Q7L3B6 337 aa10□□□□□ -0.81
COPS2-206ENST00000559016 USP48Q86UV5 1035 aa10□□□□□ -0.81
COPS2-206ENST00000559016 SUPT20HQ8NEM7 779 aa10□□□□□ -0.81
COPS2-206ENST00000559016 ANO8Q9HCE9 1232 aaPredicted RBP10□□□□□ -0.81
COPS2-206ENST00000559016 NAP1L2Q9ULW6 460 aaPredicted RBP10□□□□□ -0.81
COPS2-206ENST00000559016 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10□□□□□ -0.81
COPS2-206ENST00000559016 SLX4Q8IY92 1834 aa10□□□□□ -0.81
COPS2-206ENST00000559016 DDX60LQ5H9U9 1706 aaKnown RBP9.99□□□□□ -0.81
COPS2-206ENST00000559016 PSME4Q14997 1843 aa9.99□□□□□ -0.81
COPS2-206ENST00000559016 TESPA1A2RU30 521 aaPredicted RBP9.99□□□□□ -0.81
COPS2-206ENST00000559016 GOLGA6L3A6NEY3 463 aa9.99□□□□□ -0.81
COPS2-206ENST00000559016 FDPSP14324 419 aaKnown RBP9.99□□□□□ -0.81
COPS2-206ENST00000559016 IFNAR1P17181 557 aa9.99□□□□□ -0.81
COPS2-206ENST00000559016 USP5P45974 858 aa9.99□□□□□ -0.81
COPS2-206ENST00000559016 RESTQ13127 1097 aa9.99□□□□□ -0.81
COPS2-206ENST00000559016 SEC23AQ15436 765 aa9.99□□□□□ -0.81
COPS2-206ENST00000559016 C12orf60Q5U649 245 aa9.99□□□□□ -0.81
COPS2-206ENST00000559016 FBXO18Q8NFZ0 1043 aa9.99□□□□□ -0.81
COPS2-206ENST00000559016 GPT2Q8TD30 523 aa9.99□□□□□ -0.81
COPS2-206ENST00000559016 ZNF622Q969S3 477 aaKnown RBP eCLIP9.99□□□□□ -0.81
COPS2-206ENST00000559016 ZSCAN10Q96SZ4 725 aaPredicted RBP9.99□□□□□ -0.81
COPS2-206ENST00000559016 NCOA5Q9HCD5 579 aaKnown RBP9.99□□□□□ -0.81
COPS2-206ENST00000559016 TOMM22Q9NS69 142 aa9.99□□□□□ -0.81
COPS2-206ENST00000559016 RBM28Q9NW13 759 aaKnown RBP9.99□□□□□ -0.81
COPS2-206ENST00000559016 ORC3Q9UBD5 711 aaPredicted RBP9.99□□□□□ -0.81
COPS2-206ENST00000559016 ECM29Q5VYK3 1845 aa9.98□□□□□ -0.81
COPS2-206ENST00000559016 EP400Q96L91 3159 aa9.98□□□□□ -0.81
COPS2-206ENST00000559016 GOLGA8AA7E2F4 631 aa9.98□□□□□ -0.81
COPS2-206ENST00000559016 ARHGAP33O14559 1287 aa9.98□□□□□ -0.81
COPS2-206ENST00000559016 DDAH1O94760 285 aa9.98□□□□□ -0.81
COPS2-206ENST00000559016 IARSP41252 1262 aaKnown RBP9.98□□□□□ -0.81
COPS2-206ENST00000559016 MRE11P49959 708 aa9.98□□□□□ -0.81
COPS2-206ENST00000559016 HDLBPQ00341 1268 aaKnown RBP9.98□□□□□ -0.81
COPS2-206ENST00000559016 DNM1Q05193 864 aaKnown RBP9.98□□□□□ -0.81
COPS2-206ENST00000559016 CAMK2BQ13554 666 aa9.98□□□□□ -0.81
COPS2-206ENST00000559016 NTRK3Q16288 839 aa9.98□□□□□ -0.81
COPS2-206ENST00000559016 RRP12Q5JTH9 1297 aaKnown RBP9.98□□□□□ -0.81
COPS2-206ENST00000559016 BRAPQ7Z569 592 aa9.98□□□□□ -0.81
COPS2-206ENST00000559016 C7orf43Q8WVR3 580 aa9.98□□□□□ -0.81
COPS2-206ENST00000559016 ANKS1AQ92625 1134 aa9.98□□□□□ -0.81
COPS2-206ENST00000559016 DDX11Q96FC9 970 aa9.98□□□□□ -0.81
COPS2-206ENST00000559016 C8orf76Q96K31 380 aa9.98□□□□□ -0.81
COPS2-206ENST00000559016 ZNF396Q96N95 335 aaPredicted RBP9.98□□□□□ -0.81
COPS2-206ENST00000559016 MAP3K14Q99558 947 aa9.98□□□□□ -0.81
COPS2-206ENST00000559016 VPS33BQ9H267 617 aa9.98□□□□□ -0.81
COPS2-206ENST00000559016 GPHNQ9NQX3 736 aaPredicted RBP9.98□□□□□ -0.81
COPS2-206ENST00000559016 TCP11L1Q9NUJ3 509 aa9.98□□□□□ -0.81
COPS2-206ENST00000559016 CNPY2Q9Y2B0 182 aa9.98□□□□□ -0.81
COPS2-206ENST00000559016 TACC3Q9Y6A5 838 aa9.98□□□□□ -0.81
COPS2-206ENST00000559016 TNKSO95271 1327 aa9.98□□□□□ -0.81
COPS2-206ENST00000559016 C10orf71Q711Q0 1435 aa9.98□□□□□ -0.81
COPS2-206ENST00000559016 FMNL1O95466 1100 aaPredicted RBP9.97□□□□□ -0.81
COPS2-206ENST00000559016 BTDP43251 543 aa9.97□□□□□ -0.81
COPS2-206ENST00000559016 GTF2IP78347 998 aa9.97□□□□□ -0.81
COPS2-206ENST00000559016 SSRP1Q08945 709 aaKnown RBP9.97□□□□□ -0.81
COPS2-206ENST00000559016 RTN1Q16799 776 aa9.97□□□□□ -0.81
COPS2-206ENST00000559016 STRIP1Q5VSL9 837 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms