RNA–Protein interactions for RNA: ENST00000558894.5

SMAD3-209, Transcript of SMAD family member 3, humanhuman

TSL 5

Gene SMAD3, Length 797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-209ENST00000558894 IDH1O75874 414 aaKnown RBP6.77□□□□□ -1.33
SMAD3-209ENST00000558894 GDF11O95390 407 aa6.77□□□□□ -1.33
SMAD3-209ENST00000558894 FMNL1O95466 1100 aaPredicted RBP6.77□□□□□ -1.33
SMAD3-209ENST00000558894 MYCP01106 439 aaPredicted RBP6.77□□□□□ -1.33
SMAD3-209ENST00000558894 PLCG2P16885 1265 aa6.77□□□□□ -1.33
SMAD3-209ENST00000558894 HOXA7P31268 230 aaPredicted RBP6.77□□□□□ -1.33
SMAD3-209ENST00000558894 GRK4P32298 578 aa6.77□□□□□ -1.33
SMAD3-209ENST00000558894 GUCY1A2P33402 732 aa6.77□□□□□ -1.33
SMAD3-209ENST00000558894 SHMT1P34896 483 aa6.77□□□□□ -1.33
SMAD3-209ENST00000558894 FLT3LGP49771 235 aa6.77□□□□□ -1.33
SMAD3-209ENST00000558894 PLCD1P51178 756 aa6.77□□□□□ -1.33
SMAD3-209ENST00000558894 FCGRTP55899 365 aa6.77□□□□□ -1.33
SMAD3-209ENST00000558894 BACE1P56817 501 aa6.77□□□□□ -1.33
SMAD3-209ENST00000558894 GABPAQ06546 454 aa6.77□□□□□ -1.33
SMAD3-209ENST00000558894 IRF5Q13568 498 aa6.77□□□□□ -1.33
SMAD3-209ENST00000558894 KIF22Q14807 665 aa6.77□□□□□ -1.33
SMAD3-209ENST00000558894 FAM110CQ1W6H9 321 aa6.77□□□□□ -1.33
SMAD3-209ENST00000558894 SLFNL1Q499Z3 407 aa6.77□□□□□ -1.33
SMAD3-209ENST00000558894 NBPF11Q86T75 865 aa6.77□□□□□ -1.33
SMAD3-209ENST00000558894 ERC1Q8IUD2 1116 aa6.77□□□□□ -1.33
SMAD3-209ENST00000558894 ANKRD13CQ8N6S4 541 aa6.77□□□□□ -1.33
SMAD3-209ENST00000558894 EDC3Q96F86 508 aaKnown RBP6.77□□□□□ -1.33
SMAD3-209ENST00000558894 TBC1D2Q9BYX2 928 aa6.77□□□□□ -1.33
SMAD3-209ENST00000558894 ASCC2Q9H1I8 757 aaPredicted RBP6.77□□□□□ -1.33
SMAD3-209ENST00000558894 EHD4Q9H223 541 aa6.77□□□□□ -1.33
SMAD3-209ENST00000558894 TXNRD2Q9NNW7 524 aa6.77□□□□□ -1.33
SMAD3-209ENST00000558894 EMILIN3Q9NT22 766 aa6.77□□□□□ -1.33
SMAD3-209ENST00000558894 RBPJLQ9UBG7 517 aa6.77□□□□□ -1.33
SMAD3-209ENST00000558894 MORF4L1Q9UBU8 362 aa6.77□□□□□ -1.33
SMAD3-209ENST00000558894 SAP30BPQ9UHR5 308 aaKnown RBP6.77□□□□□ -1.33
SMAD3-209ENST00000558894 RCAN3Q9UKA8 241 aa6.77□□□□□ -1.33
SMAD3-209ENST00000558894 ZBTB21Q9ULJ3 1066 aa6.77□□□□□ -1.33
SMAD3-209ENST00000558894 DDX19BQ9UMR2 479 aa6.77□□□□□ -1.33
SMAD3-209ENST00000558894 CEP290O15078 2479 aa6.76□□□□□ -1.33
SMAD3-209ENST00000558894 ZNF236Q9UL36 1845 aa6.76□□□□□ -1.33
SMAD3-209ENST00000558894 SMIM22K7EJ46 135 aa6.76□□□□□ -1.33
SMAD3-209ENST00000558894 GJB1P08034 283 aa6.76□□□□□ -1.33
SMAD3-209ENST00000558894 ASNSP08243 561 aa6.76□□□□□ -1.33
SMAD3-209ENST00000558894 CCL5P13501 91 aa6.76□□□□□ -1.33
SMAD3-209ENST00000558894 ELNP15502 786 aa6.76□□□□□ -1.33
SMAD3-209ENST00000558894 PDE6AP16499 860 aa6.76□□□□□ -1.33
SMAD3-209ENST00000558894 GJA8P48165 433 aa6.76□□□□□ -1.33
SMAD3-209ENST00000558894 MTMR2Q13614 643 aa6.76□□□□□ -1.33
SMAD3-209ENST00000558894 SLC4A8Q2Y0W8 1093 aa6.76□□□□□ -1.33
SMAD3-209ENST00000558894 Q3C1V9 767 aa6.76□□□□□ -1.33
SMAD3-209ENST00000558894 HABP4Q5JVS0 413 aaKnown RBP6.76□□□□□ -1.33
SMAD3-209ENST00000558894 TMED8Q6PL24 325 aaPredicted RBP6.76□□□□□ -1.33
SMAD3-209ENST00000558894 PXYLP1Q8TE99 480 aa6.76□□□□□ -1.33
SMAD3-209ENST00000558894 P2RX7Q99572 595 aaKnown RBP6.76□□□□□ -1.33
SMAD3-209ENST00000558894 TMEM106CQ9BVX2 250 aa6.76□□□□□ -1.33
SMAD3-209ENST00000558894 UNC93B1Q9H1C4 597 aa6.76□□□□□ -1.33
SMAD3-209ENST00000558894 PAK6Q9NQU5 681 aaPredicted RBP6.76□□□□□ -1.33
SMAD3-209ENST00000558894 GINM1Q9NU53 330 aa6.76□□□□□ -1.33
SMAD3-209ENST00000558894 PLXNA1Q9UIW2 1896 aa6.76□□□□□ -1.33
SMAD3-209ENST00000558894 UNC80Q8N2C7 3258 aa6.76□□□□□ -1.33
SMAD3-209ENST00000558894 ZNF532Q9HCE3 1301 aa6.76□□□□□ -1.33
SMAD3-209ENST00000558894 VCANP13611 3396 aa6.75□□□□□ -1.33
SMAD3-209ENST00000558894 C19orf81C9J6K1 198 aa6.75□□□□□ -1.33
SMAD3-209ENST00000558894 USP17L10C9JJH3 530 aa6.75□□□□□ -1.33
SMAD3-209ENST00000558894 GOLIM4O00461 696 aa6.75□□□□□ -1.33
SMAD3-209ENST00000558894 TNPO2O14787 897 aaKnown RBP6.75□□□□□ -1.33
SMAD3-209ENST00000558894 ADCY3O60266 1144 aa6.75□□□□□ -1.33
SMAD3-209ENST00000558894 RAB11FIP3O75154 756 aa6.75□□□□□ -1.33
SMAD3-209ENST00000558894 CNMDO75829 334 aa6.75□□□□□ -1.33
SMAD3-209ENST00000558894 GH2P01242 217 aa6.75□□□□□ -1.33
SMAD3-209ENST00000558894 MS4A1P11836 297 aa6.75□□□□□ -1.33
SMAD3-209ENST00000558894 ATP5JP18859 108 aa6.75□□□□□ -1.33
SMAD3-209ENST00000558894 HOXD10P28358 340 aa6.75□□□□□ -1.33
SMAD3-209ENST00000558894 GCLCP48506 637 aaPredicted RBP6.75□□□□□ -1.33
SMAD3-209ENST00000558894 MNX1P50219 401 aaPredicted RBP6.75□□□□□ -1.33
SMAD3-209ENST00000558894 MAP3K12Q12852 859 aa6.75□□□□□ -1.33
SMAD3-209ENST00000558894 TRIM32Q13049 653 aa6.75□□□□□ -1.33
SMAD3-209ENST00000558894 PDE3AQ14432 1141 aa6.75□□□□□ -1.33
SMAD3-209ENST00000558894 HSP90AB4PQ58FF6 505 aa6.75□□□□□ -1.33
SMAD3-209ENST00000558894 SLC9C2Q5TAH2 1124 aa6.75□□□□□ -1.33
SMAD3-209ENST00000558894 SIAH1Q8IUQ4 282 aa6.75□□□□□ -1.33
SMAD3-209ENST00000558894 LCORLQ8N3X6 602 aa6.75□□□□□ -1.33
SMAD3-209ENST00000558894 SLAIN1Q8ND83 568 aa6.75□□□□□ -1.33
SMAD3-209ENST00000558894 RAET1EQ8TD07 263 aa6.75□□□□□ -1.33
SMAD3-209ENST00000558894 SMCR8Q8TEV9 937 aaPredicted RBP6.75□□□□□ -1.33
SMAD3-209ENST00000558894 USP6NLQ92738 828 aa6.75□□□□□ -1.33
SMAD3-209ENST00000558894 KIF1BPQ96EK5 621 aa6.75□□□□□ -1.33
SMAD3-209ENST00000558894 C12orf42Q96LP6 360 aa6.75□□□□□ -1.33
SMAD3-209ENST00000558894 NOL10Q9BSC4 688 aaKnown RBP6.75□□□□□ -1.33
SMAD3-209ENST00000558894 CRISPLD2Q9H0B8 497 aa6.75□□□□□ -1.33
SMAD3-209ENST00000558894 AS3MTQ9HBK9 375 aa6.75□□□□□ -1.33
SMAD3-209ENST00000558894 SERPINB13Q9UIV8 391 aa6.75□□□□□ -1.33
SMAD3-209ENST00000558894 MYH4Q9Y623 1939 aa6.75□□□□□ -1.33
SMAD3-209ENST00000558894 MAGEB6P1A0A0J9YX57 407 aa6.74□□□□□ -1.33
SMAD3-209ENST00000558894 A0A1W2PRG0 241 aa6.74□□□□□ -1.33
SMAD3-209ENST00000558894 APBB1O00213 710 aa6.74□□□□□ -1.33
SMAD3-209ENST00000558894 PRKAB2O43741 272 aa6.74□□□□□ -1.33
SMAD3-209ENST00000558894 SMARCA5O60264 1052 aaPredicted RBP6.74□□□□□ -1.33
SMAD3-209ENST00000558894 SGPL1O95470 568 aa6.74□□□□□ -1.33
SMAD3-209ENST00000558894 IGHA2P01877 340 aa6.74□□□□□ -1.33
SMAD3-209ENST00000558894 INHAP05111 366 aa6.74□□□□□ -1.33
SMAD3-209ENST00000558894 CYP2D6P10635 497 aa6.74□□□□□ -1.33
SMAD3-209ENST00000558894 ADD2P35612 726 aa6.74□□□□□ -1.33
SMAD3-209ENST00000558894 HERVK_113P62684 666 aa6.74□□□□□ -1.33
SMAD3-209ENST00000558894 TTF1Q15361 905 aaPredicted RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms