RNA–Protein interactions for RNA: ENST00000558796.2

PBX1-213, Transcript of PBX homeobox 1, humanhuman

TSL 5

Gene PBX1, Length 366 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-213ENST00000558796 M0R2C6 588 aa13.25□□□□□ -0.29
PBX1-213ENST00000558796 PDE1AP54750 535 aa13.25□□□□□ -0.29
PBX1-213ENST00000558796 GPAT2Q6NUI2 795 aa13.25□□□□□ -0.29
PBX1-213ENST00000558796 CD99L2Q8TCZ2 262 aa13.25□□□□□ -0.29
PBX1-213ENST00000558796 APPBP2Q92624 585 aa13.25□□□□□ -0.29
PBX1-213ENST00000558796 OSBP2Q969R2 916 aa13.25□□□□□ -0.29
PBX1-213ENST00000558796 ZCCHC17Q9NP64 241 aaKnown RBP13.25□□□□□ -0.29
PBX1-213ENST00000558796 PARP14Q460N5 1801 aa13.25□□□□□ -0.29
PBX1-213ENST00000558796 CYP2D7A0A087X1C5 515 aa13.24□□□□□ -0.29
PBX1-213ENST00000558796 USP17L5A8MUK1 530 aa13.24□□□□□ -0.29
PBX1-213ENST00000558796 SMIM22K7EJ46 135 aa13.24□□□□□ -0.29
PBX1-213ENST00000558796 GH2P01242 217 aa13.24□□□□□ -0.29
PBX1-213ENST00000558796 ZFYP08048 801 aaPredicted RBP13.24□□□□□ -0.29
PBX1-213ENST00000558796 ASNSP08243 561 aa13.24□□□□□ -0.29
PBX1-213ENST00000558796 SHMT1P34896 483 aa13.24□□□□□ -0.29
PBX1-213ENST00000558796 HMGCS2P54868 508 aa13.24□□□□□ -0.29
PBX1-213ENST00000558796 NUCB1Q02818 461 aa13.24□□□□□ -0.29
PBX1-213ENST00000558796 SPP2Q13103 211 aa13.24□□□□□ -0.29
PBX1-213ENST00000558796 FASTKD5Q7L8L6 764 aaKnown RBP13.24□□□□□ -0.29
PBX1-213ENST00000558796 CHD1LQ86WJ1 897 aa13.24□□□□□ -0.29
PBX1-213ENST00000558796 SLC44A5Q8NCS7 719 aa13.24□□□□□ -0.29
PBX1-213ENST00000558796 ZNF280CQ8ND82 737 aa13.24□□□□□ -0.29
PBX1-213ENST00000558796 ATP8A2Q9NTI2 1148 aa13.24□□□□□ -0.29
PBX1-213ENST00000558796 STAP2Q9UGK3 403 aa13.24□□□□□ -0.29
PBX1-213ENST00000558796 ADGRA2Q96PE1 1338 aa13.23□□□□□ -0.29
PBX1-213ENST00000558796 GPAA1O43292 621 aa13.23□□□□□ -0.29
PBX1-213ENST00000558796 TLR2O60603 784 aa13.23□□□□□ -0.29
PBX1-213ENST00000558796 CYP2C8P10632 490 aa13.23□□□□□ -0.29
PBX1-213ENST00000558796 CAP1Q01518 475 aa13.23□□□□□ -0.29
PBX1-213ENST00000558796 SP3Q02447 781 aa13.23□□□□□ -0.29
PBX1-213ENST00000558796 MTMR2Q13614 643 aa13.23□□□□□ -0.29
PBX1-213ENST00000558796 TREML2Q5T2D2 321 aa13.23□□□□□ -0.29
PBX1-213ENST00000558796 TATDN1Q6P1N9 297 aa13.23□□□□□ -0.29
PBX1-213ENST00000558796 DYNLL2Q96FJ2 89 aa13.23□□□□□ -0.29
PBX1-213ENST00000558796 DDRGK1Q96HY6 314 aa13.23□□□□□ -0.29
PBX1-213ENST00000558796 STRBPQ96SI9 672 aaKnown RBP13.23□□□□□ -0.29
PBX1-213ENST00000558796 SEC62Q99442 399 aaKnown RBP13.23□□□□□ -0.29
PBX1-213ENST00000558796 PARK7Q99497 189 aaKnown RBP13.23□□□□□ -0.29
PBX1-213ENST00000558796 AS3MTQ9HBK9 375 aa13.23□□□□□ -0.29
PBX1-213ENST00000558796 CPA4Q9UI42 421 aa13.23□□□□□ -0.29
PBX1-213ENST00000558796 LAMA4Q16363 1823 aa13.23□□□□□ -0.29
PBX1-213ENST00000558796 USP17L12C9JPN9 530 aa13.22□□□□□ -0.29
PBX1-213ENST00000558796 USP17L21D6R901 530 aa13.22□□□□□ -0.29
PBX1-213ENST00000558796 ECM2O94769 699 aaPredicted RBP13.22□□□□□ -0.29
PBX1-213ENST00000558796 GABPAQ06546 454 aa13.22□□□□□ -0.29
PBX1-213ENST00000558796 RAB3GAP1Q15042 981 aa13.22□□□□□ -0.29
PBX1-213ENST00000558796 ABCB5Q2M3G0 1257 aa13.22□□□□□ -0.29
PBX1-213ENST00000558796 LRRFIP1Q32MZ4 808 aaKnown RBP13.22□□□□□ -0.29
PBX1-213ENST00000558796 CERKLQ49MI3 558 aaPredicted RBP13.22□□□□□ -0.29
PBX1-213ENST00000558796 ERO1AQ96HE7 468 aa13.22□□□□□ -0.29
PBX1-213ENST00000558796 TBC1D2Q9BYX2 928 aa13.22□□□□□ -0.29
PBX1-213ENST00000558796 AGTPBP1Q9UPW5 1226 aa13.22□□□□□ -0.29
PBX1-213ENST00000558796 TRIM17Q9Y577 477 aa13.22□□□□□ -0.29
PBX1-213ENST00000558796 COL11A1P12107 1806 aaPredicted RBP13.21□□□□□ -0.29
PBX1-213ENST00000558796 C12orf60Q5U649 245 aa13.21□□□□□ -0.29
PBX1-213ENST00000558796 OTOP1Q7RTM1 612 aa13.21□□□□□ -0.29
PBX1-213ENST00000558796 PLEKHM2Q8IWE5 1019 aa13.21□□□□□ -0.29
PBX1-213ENST00000558796 AMOTL1Q8IY63 956 aa13.21□□□□□ -0.29
PBX1-213ENST00000558796 PROCA1Q8NCQ7 364 aaPredicted RBP13.21□□□□□ -0.29
PBX1-213ENST00000558796 EVI5LQ96CN4 794 aa13.21□□□□□ -0.29
PBX1-213ENST00000558796 WDR18Q9BV38 432 aa13.21□□□□□ -0.29
PBX1-213ENST00000558796 ARHGAP39Q9C0H5 1083 aa13.21□□□□□ -0.29
PBX1-213ENST00000558796 EPB41L4AQ9HCS5 686 aaPredicted RBP13.21□□□□□ -0.29
PBX1-213ENST00000558796 GINM1Q9NU53 330 aa13.21□□□□□ -0.29
PBX1-213ENST00000558796 RBBP6Q7Z6E9 1792 aaKnown RBP13.2□□□□□ -0.3
PBX1-213ENST00000558796 RLFQ13129 1914 aa13.2□□□□□ -0.3
PBX1-213ENST00000558796 CCDC85CA6NKD9 419 aa13.2□□□□□ -0.3
PBX1-213ENST00000558796 GSG1L2A8MUP6 293 aa13.2□□□□□ -0.3
PBX1-213ENST00000558796 TRIM6-TRIM34B2RNG4 842 aa13.2□□□□□ -0.3
PBX1-213ENST00000558796 MPHOSPH10O00566 681 aaKnown RBP13.2□□□□□ -0.3
PBX1-213ENST00000558796 ZYXQ15942 572 aaKnown RBP13.2□□□□□ -0.3
PBX1-213ENST00000558796 ZMYM1Q5SVZ6 1142 aa13.2□□□□□ -0.3
PBX1-213ENST00000558796 CTR9Q6PD62 1173 aa13.2□□□□□ -0.3
PBX1-213ENST00000558796 CCDC129Q6ZRS4 1044 aa13.2□□□□□ -0.3
PBX1-213ENST00000558796 FEZ1Q99689 392 aa13.2□□□□□ -0.3
PBX1-213ENST00000558796 CABP5Q9NP86 173 aa13.2□□□□□ -0.3
PBX1-213ENST00000558796 ARPP21Q9UBL0 812 aaPredicted RBP13.2□□□□□ -0.3
PBX1-213ENST00000558796 PLXNB2O15031 1838 aa13.19□□□□□ -0.3
PBX1-213ENST00000558796 USP17L10C9JJH3 530 aa13.19□□□□□ -0.3
PBX1-213ENST00000558796 APPP05067 770 aa13.19□□□□□ -0.3
PBX1-213ENST00000558796 GNAT2P19087 354 aa13.19□□□□□ -0.3
PBX1-213ENST00000558796 GUCY1A2P33402 732 aa13.19□□□□□ -0.3
PBX1-213ENST00000558796 TDO2P48775 406 aa13.19□□□□□ -0.3
PBX1-213ENST00000558796 BACE1P56817 501 aa13.19□□□□□ -0.3
PBX1-213ENST00000558796 LACTBP83111 547 aaPredicted RBP13.19□□□□□ -0.3
PBX1-213ENST00000558796 SEPT2Q15019 361 aa13.19□□□□□ -0.3
PBX1-213ENST00000558796 SH3D19Q5HYK7 790 aa13.19□□□□□ -0.3
PBX1-213ENST00000558796 C17orf99Q6UX52 265 aa13.19□□□□□ -0.3
PBX1-213ENST00000558796 CLEC10AQ8IUN9 316 aa13.19□□□□□ -0.3
PBX1-213ENST00000558796 STK11IPQ8N1F8 1099 aa13.19□□□□□ -0.3
PBX1-213ENST00000558796 SMCR8Q8TEV9 937 aaPredicted RBP13.19□□□□□ -0.3
PBX1-213ENST00000558796 RILPL2Q969X0 211 aa13.19□□□□□ -0.3
PBX1-213ENST00000558796 EFCC1Q9HA90 598 aa13.19□□□□□ -0.3
PBX1-213ENST00000558796 TMOD4Q9NZQ9 345 aa13.19□□□□□ -0.3
PBX1-213ENST00000558796 SWAP70Q9UH65 585 aa13.19□□□□□ -0.3
PBX1-213ENST00000558796 SLC45A1Q9Y2W3 748 aa13.19□□□□□ -0.3
PBX1-213ENST00000558796 A0A0G2JMZ2 1700 aa13.19□□□□□ -0.3
PBX1-213ENST00000558796 ROBO3Q96MS0 1386 aa13.19□□□□□ -0.3
PBX1-213ENST00000558796 KIAA0100Q14667 2235 aaKnown RBP13.19□□□□□ -0.3
PBX1-213ENST00000558796 A0A0D9SFI3 127 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms