RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 SHTN1A0MZ66 631 aa15.12■□□□□ 0.01
SMAD3-207ENST00000558763 H3BQV1 296 aa15.12■□□□□ 0.01
SMAD3-207ENST00000558763 LDHCP07864 332 aa15.12■□□□□ 0.01
SMAD3-207ENST00000558763 BTDP43251 543 aa15.12■□□□□ 0.01
SMAD3-207ENST00000558763 CRKP46108 304 aa15.12■□□□□ 0.01
SMAD3-207ENST00000558763 FOSBP53539 338 aa15.12■□□□□ 0.01
SMAD3-207ENST00000558763 RCAN1P53805 252 aa15.12■□□□□ 0.01
SMAD3-207ENST00000558763 WTAPQ15007 396 aa15.12■□□□□ 0.01
SMAD3-207ENST00000558763 IFFO2Q5TF58 517 aa15.12■□□□□ 0.01
SMAD3-207ENST00000558763 C12orf60Q5U649 245 aa15.12■□□□□ 0.01
SMAD3-207ENST00000558763 OGFOD1Q8N543 542 aa15.12■□□□□ 0.01
SMAD3-207ENST00000558763 SLC12A7Q9Y666 1083 aa15.12■□□□□ 0.01
SMAD3-207ENST00000558763 MYH6P13533 1939 aa15.12■□□□□ 0.01
SMAD3-207ENST00000558763 GOLGA8AA7E2F4 631 aa15.11■□□□□ 0.01
SMAD3-207ENST00000558763 NCLP19338 710 aaKnown RBP15.11■□□□□ 0.01
SMAD3-207ENST00000558763 UBE2HP62256 183 aa15.11■□□□□ 0.01
SMAD3-207ENST00000558763 KRT85P78386 507 aa15.11■□□□□ 0.01
SMAD3-207ENST00000558763 CCDC144CPQ8IYA2 1237 aa15.11■□□□□ 0.01
SMAD3-207ENST00000558763 GPC2Q8N158 579 aa15.11■□□□□ 0.01
SMAD3-207ENST00000558763 NOL10Q9BSC4 688 aaKnown RBP15.11■□□□□ 0.01
SMAD3-207ENST00000558763 ZSCAN16Q9H4T2 348 aaPredicted RBP15.11■□□□□ 0.01
SMAD3-207ENST00000558763 GJB4Q9NTQ9 266 aa15.11■□□□□ 0.01
SMAD3-207ENST00000558763 DCAF8L1A6NGE4 600 aa15.11■□□□□ 0.01
SMAD3-207ENST00000558763 CPLX1O14810 134 aa15.11■□□□□ 0.01
SMAD3-207ENST00000558763 DDNO94850 711 aaPredicted RBP15.11■□□□□ 0.01
SMAD3-207ENST00000558763 SART3Q15020 963 aaKnown RBP15.11■□□□□ 0.01
SMAD3-207ENST00000558763 OTUD7BQ6GQQ9 843 aa15.11■□□□□ 0.01
SMAD3-207ENST00000558763 NFXL1Q6ZNB6 911 aa15.11■□□□□ 0.01
SMAD3-207ENST00000558763 FBXO18Q8NFZ0 1043 aa15.11■□□□□ 0.01
SMAD3-207ENST00000558763 AIFM3Q96NN9 605 aa15.11■□□□□ 0.01
SMAD3-207ENST00000558763 ZSCAN10Q96SZ4 725 aaPredicted RBP15.11■□□□□ 0.01
SMAD3-207ENST00000558763 MCM9Q9NXL9 1143 aa15.11■□□□□ 0.01
SMAD3-207ENST00000558763 HDAC9Q9UKV0 1011 aa15.11■□□□□ 0.01
SMAD3-207ENST00000558763 GOLGA6L3A6NEY3 463 aa15.1■□□□□ 0.01
SMAD3-207ENST00000558763 CCDC69A6NI79 296 aa15.1■□□□□ 0.01
SMAD3-207ENST00000558763 UBE2Q2LH0YL09 131 aa15.1■□□□□ 0.01
SMAD3-207ENST00000558763 BAG3O95817 575 aa15.1■□□□□ 0.01
SMAD3-207ENST00000558763 RPS12P25398 132 aaKnown RBP15.1■□□□□ 0.01
SMAD3-207ENST00000558763 GUCY1B3Q02153 619 aa15.1■□□□□ 0.01
SMAD3-207ENST00000558763 ZNF654Q8IZM8 581 aa15.1■□□□□ 0.01
SMAD3-207ENST00000558763 RGS22Q8NE09 1264 aa15.1■□□□□ 0.01
SMAD3-207ENST00000558763 TGFBRAP1Q8WUH2 860 aa15.1■□□□□ 0.01
SMAD3-207ENST00000558763 PHKBQ93100 1093 aa15.1■□□□□ 0.01
SMAD3-207ENST00000558763 SERPINA10Q9UK55 444 aa15.1■□□□□ 0.01
SMAD3-207ENST00000558763 ISY1Q9ULR0 285 aaKnown RBP15.1■□□□□ 0.01
SMAD3-207ENST00000558763 STK36Q9NRP7 1315 aa15.1■□□□□ 0.01
SMAD3-207ENST00000558763 IFNAR1P17181 557 aa15.09■□□□□ 0.01
SMAD3-207ENST00000558763 CFAP100Q494V2 611 aa15.09■□□□□ 0.01
SMAD3-207ENST00000558763 HHIPL2Q6UWX4 724 aa15.09■□□□□ 0.01
SMAD3-207ENST00000558763 MICALL2Q8IY33 904 aa15.09■□□□□ 0.01
SMAD3-207ENST00000558763 TMTC2Q8N394 836 aa15.09■□□□□ 0.01
SMAD3-207ENST00000558763 LEO1Q8WVC0 666 aaPredicted RBP15.09■□□□□ 0.01
SMAD3-207ENST00000558763 UBAC1Q9BSL1 405 aa15.09■□□□□ 0.01
SMAD3-207ENST00000558763 HDLBPQ00341 1268 aaKnown RBP15.09■□□□□ 0.01
SMAD3-207ENST00000558763 NBPF11Q86T75 865 aa15.09■□□□□ 0.01
SMAD3-207ENST00000558763 CERS3Q8IU89 383 aa15.09■□□□□ 0.01
SMAD3-207ENST00000558763 C8orf76Q96K31 380 aa15.09■□□□□ 0.01
SMAD3-207ENST00000558763 ZDHHC15Q96MV8 337 aa15.09■□□□□ 0.01
SMAD3-207ENST00000558763 TFIP11Q9UBB9 837 aaKnown RBP15.09■□□□□ 0.01
SMAD3-207ENST00000558763 FLT1P17948 1338 aa15.08■□□□□ 0.01
SMAD3-207ENST00000558763 NMT2O60551 498 aa15.08■□□□□ 0
SMAD3-207ENST00000558763 CDKL5O76039 1030 aa15.08■□□□□ 0
SMAD3-207ENST00000558763 XRCC6P12956 609 aaKnown RBP eCLIP15.08■□□□□ 0
SMAD3-207ENST00000558763 USP5P45974 858 aa15.08■□□□□ 0
SMAD3-207ENST00000558763 PLCD1P51178 756 aa15.08■□□□□ 0
SMAD3-207ENST00000558763 SLC4A8Q2Y0W8 1093 aa15.08■□□□□ 0
SMAD3-207ENST00000558763 RCSD1Q6JBY9 416 aa15.08■□□□□ 0
SMAD3-207ENST00000558763 APOBEC3HQ6NTF7 200 aaKnown RBP15.08■□□□□ 0
SMAD3-207ENST00000558763 MAPKAPK5Q8IW41 473 aa15.08■□□□□ 0
SMAD3-207ENST00000558763 DYNLL2Q96FJ2 89 aa15.08■□□□□ 0
SMAD3-207ENST00000558763 FTOQ9C0B1 505 aaKnown RBP eCLIP15.08■□□□□ 0
SMAD3-207ENST00000558763 CNOT7Q9UIV1 285 aaKnown RBP15.08■□□□□ 0
SMAD3-207ENST00000558763 ERICH2A1L162 156 aa15.07■□□□□ 0
SMAD3-207ENST00000558763 KIF28PB7ZC32 967 aa15.07■□□□□ 0
SMAD3-207ENST00000558763 FMNL1O95466 1100 aaPredicted RBP15.07■□□□□ 0
SMAD3-207ENST00000558763 FUT2Q10981 343 aa15.07■□□□□ 0
SMAD3-207ENST00000558763 TROAPQ12815 778 aa15.07■□□□□ 0
SMAD3-207ENST00000558763 RTN1Q16799 776 aa15.07■□□□□ 0
SMAD3-207ENST00000558763 CSPP1Q1MSJ5 1256 aa15.07■□□□□ 0
SMAD3-207ENST00000558763 RBM26Q5T8P6 1007 aaKnown RBP15.07■□□□□ 0
SMAD3-207ENST00000558763 DPF2Q92785 391 aa15.07■□□□□ 0
SMAD3-207ENST00000558763 SCAND2PQ9GZW5 306 aaPredicted RBP15.07■□□□□ 0
SMAD3-207ENST00000558763 MYOZ2Q9NPC6 264 aa15.07■□□□□ 0
SMAD3-207ENST00000558763 EGFRP00533 1210 aa15.07■□□□□ 0
SMAD3-207ENST00000558763 DLGAP5Q15398 846 aa15.07■□□□□ 0
SMAD3-207ENST00000558763 FAM47AQ5JRC9 791 aa15.07■□□□□ 0
SMAD3-207ENST00000558763 DPY19L2Q6NUT2 758 aa15.07■□□□□ 0
SMAD3-207ENST00000558763 TEX11Q8IYF3 940 aa15.07■□□□□ 0
SMAD3-207ENST00000558763 FANCBQ8NB91 859 aa15.07■□□□□ 0
SMAD3-207ENST00000558763 PGBD1Q96JS3 809 aa15.07■□□□□ 0
SMAD3-207ENST00000558763 PRMT6Q96LA8 375 aaPredicted RBP15.07■□□□□ 0
SMAD3-207ENST00000558763 MRIQ9BWK5 157 aa15.07■□□□□ 0
SMAD3-207ENST00000558763 ZC3H4Q9UPT8 1303 aaKnown RBP15.06■□□□□ 0
SMAD3-207ENST00000558763 SPDYE2BA6NHP3 402 aa15.06■□□□□ 0
SMAD3-207ENST00000558763 SPDYE6P0CI01 402 aa15.06■□□□□ 0
SMAD3-207ENST00000558763 PLCG2P16885 1265 aa15.06■□□□□ 0
SMAD3-207ENST00000558763 GUCY1A2P33402 732 aa15.06■□□□□ 0
SMAD3-207ENST00000558763 CACNB3P54284 484 aa15.06■□□□□ 0
SMAD3-207ENST00000558763 ZNF280AP59817 542 aaPredicted RBP15.06■□□□□ 0
SMAD3-207ENST00000558763 KIF23Q02241 960 aaPredicted RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms