RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 JAG1P78504 1218 aa14.92□□□□□ -0.02
SMAD3-206ENST00000558739 PABPC4Q13310 644 aaKnown RBP eCLIP14.92□□□□□ -0.02
SMAD3-206ENST00000558739 ADGRE1Q14246 886 aa14.92□□□□□ -0.02
SMAD3-206ENST00000558739 CCDC85BQ15834 202 aaPredicted RBP14.92□□□□□ -0.02
SMAD3-206ENST00000558739 SH3D19Q5HYK7 790 aa14.92□□□□□ -0.02
SMAD3-206ENST00000558739 SLC39A5Q6ZMH5 540 aa14.92□□□□□ -0.02
SMAD3-206ENST00000558739 PLEKHH3Q7Z736 793 aa14.92□□□□□ -0.02
SMAD3-206ENST00000558739 TRMT44Q8IYL2 757 aaKnown RBP14.92□□□□□ -0.02
SMAD3-206ENST00000558739 PRDM12Q9H4Q4 367 aa14.92□□□□□ -0.02
SMAD3-206ENST00000558739 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.92□□□□□ -0.021e-8■■■■□ 20.2
SMAD3-206ENST00000558739 CFAP54Q96N23 3096 aa14.92□□□□□ -0.02
SMAD3-206ENST00000558739 USP34Q70CQ2 3546 aa14.92□□□□□ -0.02
SMAD3-206ENST00000558739 MAPK4P31152 587 aa14.91□□□□□ -0.02
SMAD3-206ENST00000558739 PBX2P40425 430 aa14.91□□□□□ -0.02
SMAD3-206ENST00000558739 SNX17Q15036 470 aa14.91□□□□□ -0.02
SMAD3-206ENST00000558739 RABL6Q3YEC7 729 aaPredicted RBP14.91□□□□□ -0.02
SMAD3-206ENST00000558739 FERMT2Q96AC1 680 aa14.91□□□□□ -0.02
SMAD3-206ENST00000558739 TRIOO75962 3097 aa14.91□□□□□ -0.02
SMAD3-206ENST00000558739 FANCIQ9NVI1 1328 aa14.91□□□□□ -0.02
SMAD3-206ENST00000558739 PRRC2BQ5JSZ5 2229 aaKnown RBP14.9□□□□□ -0.02
SMAD3-206ENST00000558739 MYCNP04198 464 aaPredicted RBP14.9□□□□□ -0.02
SMAD3-206ENST00000558739 BTDP43251 543 aa14.9□□□□□ -0.02
SMAD3-206ENST00000558739 MRPS5P82675 430 aaKnown RBP14.9□□□□□ -0.02
SMAD3-206ENST00000558739 MAP2K5Q13163 448 aa14.9□□□□□ -0.02
SMAD3-206ENST00000558739 SLC4A10Q6U841 1118 aa14.9□□□□□ -0.02
SMAD3-206ENST00000558739 TIFAQ96CG3 184 aa14.9□□□□□ -0.02
SMAD3-206ENST00000558739 LRFN3Q9BTN0 628 aa14.9□□□□□ -0.02
SMAD3-206ENST00000558739 CAP2P40123 477 aa14.89□□□□□ -0.03
SMAD3-206ENST00000558739 PHKA1P46020 1223 aa14.89□□□□□ -0.03
SMAD3-206ENST00000558739 RHBDL3P58872 404 aa14.89□□□□□ -0.03
SMAD3-206ENST00000558739 ZNF384Q8TF68 577 aa14.89□□□□□ -0.03
SMAD3-206ENST00000558739 C1QTNF1Q9BXJ1 281 aa14.89□□□□□ -0.03
SMAD3-206ENST00000558739 OSBPL5Q9H0X9 879 aaPredicted RBP14.89□□□□□ -0.03
SMAD3-206ENST00000558739 EPHX3Q9H6B9 360 aa14.89□□□□□ -0.03
SMAD3-206ENST00000558739 UTYO14607 1347 aa14.89□□□□□ -0.03
SMAD3-206ENST00000558739 SALL1Q9NSC2 1324 aa14.89□□□□□ -0.03
SMAD3-206ENST00000558739 USP17L5A8MUK1 530 aa14.88□□□□□ -0.03
SMAD3-206ENST00000558739 GRXCR1A8MXD5 290 aa14.88□□□□□ -0.03
SMAD3-206ENST00000558739 TBC1D12O60347 775 aa14.88□□□□□ -0.03
SMAD3-206ENST00000558739 VAMP4O75379 141 aa14.88□□□□□ -0.03
SMAD3-206ENST00000558739 CNMDO75829 334 aa14.88□□□□□ -0.03
SMAD3-206ENST00000558739 CYBAP13498 195 aa14.88□□□□□ -0.03
SMAD3-206ENST00000558739 SLC5A1P13866 664 aa14.88□□□□□ -0.03
SMAD3-206ENST00000558739 HOXA7P31268 230 aaPredicted RBP14.88□□□□□ -0.03
SMAD3-206ENST00000558739 ADCYAP1R1P41586 468 aa14.88□□□□□ -0.03
SMAD3-206ENST00000558739 BACE1P56817 501 aa14.88□□□□□ -0.03
SMAD3-206ENST00000558739 TFF2Q03403 129 aa14.88□□□□□ -0.03
SMAD3-206ENST00000558739 TLE2Q04725 743 aa14.88□□□□□ -0.03
SMAD3-206ENST00000558739 NCBP3Q53F19 620 aaKnown RBP14.88□□□□□ -0.03
SMAD3-206ENST00000558739 MFSD14CQ5VZR4 134 aa14.88□□□□□ -0.03
SMAD3-206ENST00000558739 NPLOC4Q8TAT6 608 aa14.88□□□□□ -0.03
SMAD3-206ENST00000558739 HCN4Q9Y3Q4 1203 aa14.88□□□□□ -0.03
SMAD3-206ENST00000558739 GBF1Q92538 1859 aa14.88□□□□□ -0.03
SMAD3-206ENST00000558739 CCAR1Q8IX12 1150 aaKnown RBP14.87□□□□□ -0.03
SMAD3-206ENST00000558739 LPIN2Q92539 896 aa14.87□□□□□ -0.03
SMAD3-206ENST00000558739 EDC3Q96F86 508 aaKnown RBP14.87□□□□□ -0.03
SMAD3-206ENST00000558739 SRCIN1Q9C0H9 1055 aa14.87□□□□□ -0.03
SMAD3-206ENST00000558739 SMCHD1A6NHR9 2005 aa14.87□□□□□ -0.03
SMAD3-206ENST00000558739 ZDBF2Q9HCK1 2354 aa14.87□□□□□ -0.03
SMAD3-206ENST00000558739 SPTBN4Q9H254 2564 aa14.86□□□□□ -0.03
SMAD3-206ENST00000558739 KBTBD13C9JR72 458 aa14.86□□□□□ -0.03
SMAD3-206ENST00000558739 ALDH1L1O75891 902 aa14.86□□□□□ -0.03
SMAD3-206ENST00000558739 IGHA2P01877 340 aa14.86□□□□□ -0.03
SMAD3-206ENST00000558739 KCNQ1P51787 676 aa14.86□□□□□ -0.03
SMAD3-206ENST00000558739 AKNAD1Q5T1N1 836 aa14.86□□□□□ -0.03
SMAD3-206ENST00000558739 WDR78Q5VTH9 848 aa14.86□□□□□ -0.03
SMAD3-206ENST00000558739 ALYREFQ86V81 257 aaKnown RBP14.86□□□□□ -0.03
SMAD3-206ENST00000558739 WWC1Q8IX03 1113 aa14.86□□□□□ -0.03
SMAD3-206ENST00000558739 GAS2L1Q99501 681 aaPredicted RBP14.86□□□□□ -0.03
SMAD3-206ENST00000558739 PBX4Q9BYU1 374 aa14.86□□□□□ -0.03
SMAD3-206ENST00000558739 TMOD4Q9NZQ9 345 aa14.86□□□□□ -0.03
SMAD3-206ENST00000558739 MROH7-TTC4A0A0A0MT08 1334 aa14.86□□□□□ -0.03
SMAD3-206ENST00000558739 FAM86C2PA6NEL3 165 aa14.85□□□□□ -0.03
SMAD3-206ENST00000558739 MSCO60682 206 aa14.85□□□□□ -0.03
SMAD3-206ENST00000558739 ADORA1P30542 326 aa14.85□□□□□ -0.03
SMAD3-206ENST00000558739 ATG9AQ7Z3C6 839 aa14.85□□□□□ -0.03
SMAD3-206ENST00000558739 DZIP1Q86YF9 867 aaKnown RBP14.85□□□□□ -0.03
SMAD3-206ENST00000558739 KHSRPQ92945 711 aaKnown RBP eCLIP14.85□□□□□ -0.03
SMAD3-206ENST00000558739 SNX27Q96L92 541 aa14.85□□□□□ -0.03
SMAD3-206ENST00000558739 DNAJC18Q9H819 358 aa14.85□□□□□ -0.03
SMAD3-206ENST00000558739 CWC22Q9HCG8 908 aaKnown RBP14.85□□□□□ -0.03
SMAD3-206ENST00000558739 C11orf16Q9NQ32 467 aa14.85□□□□□ -0.03
SMAD3-206ENST00000558739 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.84□□□□□ -0.03
SMAD3-206ENST00000558739 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.84□□□□□ -0.03
SMAD3-206ENST00000558739 BMP1P13497 986 aa14.84□□□□□ -0.03
SMAD3-206ENST00000558739 IGFBP4P22692 258 aa14.84□□□□□ -0.03
SMAD3-206ENST00000558739 RFX5P48382 616 aaPredicted RBP14.84□□□□□ -0.03
SMAD3-206ENST00000558739 ATP2B2Q01814 1243 aa14.84□□□□□ -0.03
SMAD3-206ENST00000558739 FPGSQ05932 587 aa14.84□□□□□ -0.03
SMAD3-206ENST00000558739 EXOSC9Q06265 439 aaKnown RBP14.84□□□□□ -0.03
SMAD3-206ENST00000558739 RASGRF1Q13972 1273 aa14.84□□□□□ -0.03
SMAD3-206ENST00000558739 FAM47AQ5JRC9 791 aa14.84□□□□□ -0.03
SMAD3-206ENST00000558739 IL27Q8NEV9 243 aa14.84□□□□□ -0.03
SMAD3-206ENST00000558739 WDR18Q9BV38 432 aa14.84□□□□□ -0.03
SMAD3-206ENST00000558739 EMILIN3Q9NT22 766 aa14.84□□□□□ -0.03
SMAD3-206ENST00000558739 ABCF2Q9UG63 623 aa14.84□□□□□ -0.03
SMAD3-206ENST00000558739 CDK5RAP2Q96SN8 1893 aa14.83□□□□□ -0.04
SMAD3-206ENST00000558739 EYA2O00167 538 aa14.83□□□□□ -0.04
SMAD3-206ENST00000558739 PQBP1O60828 265 aaKnown RBP14.83□□□□□ -0.04
SMAD3-206ENST00000558739 GDF11O95390 407 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms