RNA–Protein interactions for RNA: ENST00000558445.5

TRPM1-207, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRPM1, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-207ENST00000558445 FANCLQ9NW38 375 aa11.24□□□□□ -0.61
TRPM1-207ENST00000558445 HDAC6Q9UBN7 1215 aa11.24□□□□□ -0.61
TRPM1-207ENST00000558445 STK38LQ9Y2H1 464 aa11.24□□□□□ -0.61
TRPM1-207ENST00000558445 SYNMO15061 1565 aa11.24□□□□□ -0.61
TRPM1-207ENST00000558445 AATKQ6ZMQ8 1374 aa11.24□□□□□ -0.61
TRPM1-207ENST00000558445 EIF4E1BA6NMX2 242 aaKnown RBP11.23□□□□□ -0.61
TRPM1-207ENST00000558445 SCTRP47872 440 aa11.23□□□□□ -0.61
TRPM1-207ENST00000558445 GOLGA8FQ08AF8 430 aa11.23□□□□□ -0.61
TRPM1-207ENST00000558445 GOLGA8DPQ0D2H9 430 aa11.23□□□□□ -0.61
TRPM1-207ENST00000558445 PTGISQ16647 500 aa11.23□□□□□ -0.61
TRPM1-207ENST00000558445 TCERG1LQ5VWI1 586 aa11.23□□□□□ -0.61
TRPM1-207ENST00000558445 GRAMD4Q6IC98 578 aa11.23□□□□□ -0.61
TRPM1-207ENST00000558445 TOGARAM2Q6ZUX3 1019 aa11.23□□□□□ -0.61
TRPM1-207ENST00000558445 MYCBPAPQ8TBZ2 947 aa11.23□□□□□ -0.61
TRPM1-207ENST00000558445 MIS18AQ9NYP9 233 aa11.23□□□□□ -0.61
TRPM1-207ENST00000558445 ATXN10Q9UBB4 475 aa11.23□□□□□ -0.61
TRPM1-207ENST00000558445 HMGB1P1B2RPK0 211 aaPredicted RBP11.23□□□□□ -0.61
TRPM1-207ENST00000558445 GCOM1H8Y6P7 765 aaPredicted RBP11.23□□□□□ -0.61
TRPM1-207ENST00000558445 ZMYND10O75800 440 aa11.23□□□□□ -0.61
TRPM1-207ENST00000558445 PRPF6O94906 941 aaKnown RBP11.23□□□□□ -0.61
TRPM1-207ENST00000558445 MYZAPP0CAP1 466 aa11.23□□□□□ -0.61
TRPM1-207ENST00000558445 SKOR1P84550 965 aa11.23□□□□□ -0.61
TRPM1-207ENST00000558445 RASA3Q14644 834 aa11.23□□□□□ -0.61
TRPM1-207ENST00000558445 EMBQ6PCB8 327 aa11.23□□□□□ -0.61
TRPM1-207ENST00000558445 NANOGNBQ7Z5D8 188 aa11.23□□□□□ -0.61
TRPM1-207ENST00000558445 ARHGEF25Q86VW2 580 aa11.23□□□□□ -0.61
TRPM1-207ENST00000558445 DZIP3Q86Y13 1208 aaKnown RBP11.23□□□□□ -0.61
TRPM1-207ENST00000558445 ATP11CQ8NB49 1132 aa11.23□□□□□ -0.61
TRPM1-207ENST00000558445 KCNG4Q8TDN1 519 aa11.23□□□□□ -0.61
TRPM1-207ENST00000558445 GALNT8Q9NY28 637 aa11.23□□□□□ -0.61
TRPM1-207ENST00000558445 E9PCH4 1651 aa11.23□□□□□ -0.61
TRPM1-207ENST00000558445 VIMP08670 466 aaKnown RBP11.23□□□□□ -0.61
TRPM1-207ENST00000558445 DPCR1Q3MIW9 517 aa11.23□□□□□ -0.61
TRPM1-207ENST00000558445 CEP85Q6P2H3 762 aa11.23□□□□□ -0.61
TRPM1-207ENST00000558445 TTLL7Q6ZT98 887 aa11.23□□□□□ -0.61
TRPM1-207ENST00000558445 APBB1IPQ7Z5R6 666 aaPredicted RBP11.23□□□□□ -0.61
TRPM1-207ENST00000558445 CADPS2Q86UW7 1296 aa11.23□□□□□ -0.61
TRPM1-207ENST00000558445 TMTC1Q8IUR5 882 aa11.23□□□□□ -0.61
TRPM1-207ENST00000558445 CLASRPQ8N2M8 674 aaKnown RBP11.23□□□□□ -0.61
TRPM1-207ENST00000558445 RBM17Q96I25 401 aaKnown RBP11.23□□□□□ -0.61
TRPM1-207ENST00000558445 NAP1L3Q99457 506 aaPredicted RBP11.23□□□□□ -0.61
TRPM1-207ENST00000558445 TUBA8Q9NY65 449 aaPredicted RBP11.23□□□□□ -0.61
TRPM1-207ENST00000558445 KDM6BO15054 1643 aa11.23□□□□□ -0.61
TRPM1-207ENST00000558445 M0R2C6 588 aa11.23□□□□□ -0.61
TRPM1-207ENST00000558445 HIP1O00291 1037 aa11.23□□□□□ -0.61
TRPM1-207ENST00000558445 KRT86O43790 486 aa11.23□□□□□ -0.61
TRPM1-207ENST00000558445 HDLBPQ00341 1268 aaKnown RBP11.23□□□□□ -0.61
TRPM1-207ENST00000558445 HLTFQ14527 1009 aaKnown RBP eCLIP11.23□□□□□ -0.61
TRPM1-207ENST00000558445 ACCSLQ4AC99 568 aa11.23□□□□□ -0.61
TRPM1-207ENST00000558445 CYFIP2Q96F07 1278 aa11.23□□□□□ -0.61
TRPM1-207ENST00000558445 TRIM11Q96F44 468 aa11.23□□□□□ -0.61
TRPM1-207ENST00000558445 C8orf76Q96K31 380 aa11.23□□□□□ -0.61
TRPM1-207ENST00000558445 RAB3IPQ96QF0 476 aaPredicted RBP11.23□□□□□ -0.61
TRPM1-207ENST00000558445 NUP88Q99567 741 aaPredicted RBP11.23□□□□□ -0.61
TRPM1-207ENST00000558445 CTTNBP2NLQ9P2B4 639 aa11.23□□□□□ -0.61
TRPM1-207ENST00000558445 BIVM-ERCC5R4GMW8 1640 aa11.22□□□□□ -0.61
TRPM1-207ENST00000558445 GUCY1A3Q02108 690 aa11.22□□□□□ -0.61
TRPM1-207ENST00000558445 TLDC1Q6P9B6 456 aa11.22□□□□□ -0.61
TRPM1-207ENST00000558445 MIS12Q9H081 205 aa11.22□□□□□ -0.61
TRPM1-207ENST00000558445 ABLIM1O14639 778 aa11.22□□□□□ -0.61
TRPM1-207ENST00000558445 DIAPH1O60610 1272 aaKnown RBP11.22□□□□□ -0.61
TRPM1-207ENST00000558445 IFT20Q8IY31 132 aa11.22□□□□□ -0.61
TRPM1-207ENST00000558445 OGFOD1Q8N543 542 aa11.22□□□□□ -0.61
TRPM1-207ENST00000558445 DDX54Q8TDD1 881 aaKnown RBP11.22□□□□□ -0.61
TRPM1-207ENST00000558445 SMCR8Q8TEV9 937 aaPredicted RBP11.22□□□□□ -0.61
TRPM1-207ENST00000558445 MKL1Q969V6 931 aa11.22□□□□□ -0.61
TRPM1-207ENST00000558445 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.22□□□□□ -0.61
TRPM1-207ENST00000558445 SPG7Q9UQ90 795 aa11.22□□□□□ -0.61
TRPM1-207ENST00000558445 LAMC3Q9Y6N6 1575 aa11.22□□□□□ -0.61
TRPM1-207ENST00000558445 SNAPC4Q5SXM2 1469 aa11.22□□□□□ -0.61
TRPM1-207ENST00000558445 A0A087WWV3 80 aa11.22□□□□□ -0.61
TRPM1-207ENST00000558445 MDH1P40925 334 aaKnown RBP11.22□□□□□ -0.61
TRPM1-207ENST00000558445 ANKRD20A8PQ5CZ79 823 aa11.22□□□□□ -0.61
TRPM1-207ENST00000558445 NCAPH2Q6IBW4 605 aa11.22□□□□□ -0.61
TRPM1-207ENST00000558445 TMEM154Q6P9G4 183 aa11.22□□□□□ -0.61
TRPM1-207ENST00000558445 SIRT2Q8IXJ6 389 aa11.22□□□□□ -0.61
TRPM1-207ENST00000558445 NAF1Q96HR8 494 aaKnown RBP11.22□□□□□ -0.61
TRPM1-207ENST00000558445 OSBPL3Q9H4L5 887 aa11.22□□□□□ -0.61
TRPM1-207ENST00000558445 TMCO1Q9UM00 188 aa11.22□□□□□ -0.61
TRPM1-207ENST00000558445 A0A1B0GVL5 298 aa11.21□□□□□ -0.61
TRPM1-207ENST00000558445 CPA1P15085 419 aa11.21□□□□□ -0.61
TRPM1-207ENST00000558445 HSP90AA4PQ58FG1 418 aa11.21□□□□□ -0.61
TRPM1-207ENST00000558445 CCDC174Q6PII3 467 aa11.21□□□□□ -0.61
TRPM1-207ENST00000558445 Q6ZUG5 572 aa11.21□□□□□ -0.61
TRPM1-207ENST00000558445 KLHL29Q96CT2 875 aa11.21□□□□□ -0.61
TRPM1-207ENST00000558445 PGBD1Q96JS3 809 aa11.21□□□□□ -0.61
TRPM1-207ENST00000558445 UNC13AQ9UPW8 1703 aa11.21□□□□□ -0.61
TRPM1-207ENST00000558445 hCG_2014768A0A024R1R8 64 aa11.21□□□□□ -0.61
TRPM1-207ENST00000558445 SMAPO00193 183 aa11.21□□□□□ -0.61
TRPM1-207ENST00000558445 GSTA2P09210 222 aa11.21□□□□□ -0.61
TRPM1-207ENST00000558445 MYBPC2Q14324 1141 aa11.21□□□□□ -0.61
TRPM1-207ENST00000558445 KRT32Q14532 448 aa11.21□□□□□ -0.61
TRPM1-207ENST00000558445 NUTM2DQ5VT03 806 aaPredicted RBP11.21□□□□□ -0.61
TRPM1-207ENST00000558445 NUTM2AQ8IVF1 878 aaPredicted RBP11.21□□□□□ -0.61
TRPM1-207ENST00000558445 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.21□□□□□ -0.61
TRPM1-207ENST00000558445 SKIP12755 728 aa11.21□□□□□ -0.62
TRPM1-207ENST00000558445 CDC25CP30307 473 aa11.21□□□□□ -0.62
TRPM1-207ENST00000558445 C8orf74Q6P047 294 aa11.21□□□□□ -0.62
TRPM1-207ENST00000558445 TMEM110Q86TL2 294 aa11.21□□□□□ -0.62
TRPM1-207ENST00000558445 CTAGE1Q96RT6 745 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms