RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 MGAMO43451 1857 aa18.89■□□□□ 0.61
TPM1-211ENST00000558314 PEX10O60683 326 aa18.89■□□□□ 0.61
TPM1-211ENST00000558314 HMMRO75330 724 aa18.89■□□□□ 0.61
TPM1-211ENST00000558314 GH2P01242 217 aa18.89■□□□□ 0.61
TPM1-211ENST00000558314 GCLCP48506 637 aaPredicted RBP18.89■□□□□ 0.61
TPM1-211ENST00000558314 BACE1P56817 501 aa18.89■□□□□ 0.61
TPM1-211ENST00000558314 FAM110CQ1W6H9 321 aa18.89■□□□□ 0.61
TPM1-211ENST00000558314 DDX19BQ9UMR2 479 aa18.89■□□□□ 0.61
TPM1-211ENST00000558314 MAGEB6P1A0A0J9YX57 407 aa18.88■□□□□ 0.61
TPM1-211ENST00000558314 USP17L10C9JJH3 530 aa18.88■□□□□ 0.61
TPM1-211ENST00000558314 GOLIM4O00461 696 aa18.88■□□□□ 0.61
TPM1-211ENST00000558314 GJB1P08034 283 aa18.88■□□□□ 0.61
TPM1-211ENST00000558314 RAB3GAP1Q15042 981 aa18.88■□□□□ 0.61
TPM1-211ENST00000558314 SH3D19Q5HYK7 790 aa18.88■□□□□ 0.61
TPM1-211ENST00000558314 HABP4Q5JVS0 413 aaKnown RBP18.88■□□□□ 0.61
TPM1-211ENST00000558314 U2AF1L4Q8WU68 220 aaKnown RBP18.88■□□□□ 0.61
TPM1-211ENST00000558314 P2RX7Q99572 595 aaKnown RBP18.88■□□□□ 0.61
TPM1-211ENST00000558314 FEZ1Q99689 392 aa18.88■□□□□ 0.61
TPM1-211ENST00000558314 WDR18Q9BV38 432 aa18.88■□□□□ 0.61
TPM1-211ENST00000558314 SIPA1L1O43166 1804 aa18.88■□□□□ 0.61
TPM1-211ENST00000558314 TFRCP02786 760 aaKnown RBP18.87■□□□□ 0.61
TPM1-211ENST00000558314 POLR3DP05423 398 aaPredicted RBP18.87■□□□□ 0.61
TPM1-211ENST00000558314 GJA8P48165 433 aa18.87■□□□□ 0.61
TPM1-211ENST00000558314 BRCA2P51587 3418 aa18.87■□□□□ 0.61
TPM1-211ENST00000558314 SLC9C2Q5TAH2 1124 aa18.87■□□□□ 0.61
TPM1-211ENST00000558314 KIF1BPQ96EK5 621 aa18.87■□□□□ 0.61
TPM1-211ENST00000558314 PAGR1Q9BTK6 254 aa18.87■□□□□ 0.61
TPM1-211ENST00000558314 RCAN3Q9UKA8 241 aa18.87■□□□□ 0.61
TPM1-211ENST00000558314 C19orf81C9J6K1 198 aa18.86■□□□□ 0.61
TPM1-211ENST00000558314 H0YGN5 161 aa18.86■□□□□ 0.61
TPM1-211ENST00000558314 TTF1Q15361 905 aaPredicted RBP18.86■□□□□ 0.61
TPM1-211ENST00000558314 TTC6Q86TZ1 520 aa18.86■□□□□ 0.61
TPM1-211ENST00000558314 CCAR1Q8IX12 1150 aaKnown RBP18.86■□□□□ 0.61
TPM1-211ENST00000558314 RPAP2Q8IXW5 612 aaPredicted RBP18.86■□□□□ 0.61
TPM1-211ENST00000558314 EDC3Q96F86 508 aaKnown RBP18.86■□□□□ 0.61
TPM1-211ENST00000558314 DEFB118Q96PH6 123 aa18.86■□□□□ 0.61
TPM1-211ENST00000558314 CWC22Q9HCG8 908 aaKnown RBP18.86■□□□□ 0.61
TPM1-211ENST00000558314 SERPINB13Q9UIV8 391 aa18.86■□□□□ 0.61
TPM1-211ENST00000558314 MKI67P46013 3256 aaKnown RBP18.86■□□□□ 0.61
TPM1-211ENST00000558314 CDK5RAP2Q96SN8 1893 aa18.86■□□□□ 0.61
TPM1-211ENST00000558314 IGSF3O75054 1194 aa18.85■□□□□ 0.61
TPM1-211ENST00000558314 FARP2O94887 1054 aaPredicted RBP18.85■□□□□ 0.61
TPM1-211ENST00000558314 PDE6AP16499 860 aa18.85■□□□□ 0.61
TPM1-211ENST00000558314 IRF5Q13568 498 aa18.85■□□□□ 0.61
TPM1-211ENST00000558314 CERS3Q8IU89 383 aa18.85■□□□□ 0.61
TPM1-211ENST00000558314 PXYLP1Q8TE99 480 aa18.85■□□□□ 0.61
TPM1-211ENST00000558314 LOC285556D6RIA3 1793 aa18.85■□□□□ 0.61
TPM1-211ENST00000558314 ZNF532Q9HCE3 1301 aa18.84■□□□□ 0.61
TPM1-211ENST00000558314 MPHOSPH10O00566 681 aaKnown RBP18.84■□□□□ 0.61
TPM1-211ENST00000558314 SGPL1O95470 568 aa18.84■□□□□ 0.61
TPM1-211ENST00000558314 CYP2B6P20813 491 aa18.84■□□□□ 0.61
TPM1-211ENST00000558314 HERVK_113P62684 666 aa18.84■□□□□ 0.61
TPM1-211ENST00000558314 ABCB5Q2M3G0 1257 aa18.84■□□□□ 0.61
TPM1-211ENST00000558314 CERKLQ49MI3 558 aaPredicted RBP18.84■□□□□ 0.61
TPM1-211ENST00000558314 USP17L2Q6R6M4 530 aa18.84■□□□□ 0.61
TPM1-211ENST00000558314 METTL16Q86W50 562 aaKnown RBP18.84■□□□□ 0.61
TPM1-211ENST00000558314 SIRT2Q8IXJ6 389 aa18.84■□□□□ 0.61
TPM1-211ENST00000558314 HTATIP2Q9BUP3 242 aa18.84■□□□□ 0.61
TPM1-211ENST00000558314 CRNKL1Q9BZJ0 848 aaKnown RBP18.84■□□□□ 0.61
TPM1-211ENST00000558314 BOLA2Q9H3K6 86 aa18.84■□□□□ 0.61
TPM1-211ENST00000558314 CABP5Q9NP86 173 aa18.84■□□□□ 0.61
TPM1-211ENST00000558314 ZBTB40Q9NUA8 1239 aa18.84■□□□□ 0.61
TPM1-211ENST00000558314 MCM9Q9NXL9 1143 aa18.84■□□□□ 0.61
TPM1-211ENST00000558314 MYH1P12882 1939 aa18.83■□□□□ 0.6
TPM1-211ENST00000558314 PLCD1P51178 756 aa18.83■□□□□ 0.6
TPM1-211ENST00000558314 GPRC5AQ8NFJ5 357 aa18.83■□□□□ 0.6
TPM1-211ENST00000558314 RIOK1Q9BRS2 568 aaKnown RBP18.83■□□□□ 0.6
TPM1-211ENST00000558314 TXNRD2Q9NNW7 524 aa18.83■□□□□ 0.6
TPM1-211ENST00000558314 EMILIN3Q9NT22 766 aa18.83■□□□□ 0.6
TPM1-211ENST00000558314 GINM1Q9NU53 330 aa18.83■□□□□ 0.6
TPM1-211ENST00000558314 COLQQ9Y215 455 aaPredicted RBP18.83■□□□□ 0.6
TPM1-211ENST00000558314 FOCADQ5VW36 1801 aa18.83■□□□□ 0.6
TPM1-211ENST00000558314 RAB11FIP3O75154 756 aa18.82■□□□□ 0.6
TPM1-211ENST00000558314 TRIM32Q13049 653 aa18.82■□□□□ 0.6
TPM1-211ENST00000558314 C20orf194Q5TEA3 1177 aa18.82■□□□□ 0.6
TPM1-211ENST00000558314 WDR78Q5VTH9 848 aa18.82■□□□□ 0.6
TPM1-211ENST00000558314 SDR42E1Q8WUS8 393 aa18.82■□□□□ 0.6
TPM1-211ENST00000558314 CHMP4BQ9H444 224 aaKnown RBP18.82■□□□□ 0.6
TPM1-211ENST00000558314 HMGCRP04035 888 aa18.81■□□□□ 0.6
TPM1-211ENST00000558314 HOXA7P31268 230 aaPredicted RBP18.81■□□□□ 0.6
TPM1-211ENST00000558314 EVX2Q03828 476 aa18.81■□□□□ 0.6
TPM1-211ENST00000558314 PDE3AQ14432 1141 aa18.81■□□□□ 0.6
TPM1-211ENST00000558314 SLFNL1Q499Z3 407 aa18.81■□□□□ 0.6
TPM1-211ENST00000558314 TATDN1Q6P1N9 297 aa18.81■□□□□ 0.6
TPM1-211ENST00000558314 CHRDL2Q6WN34 429 aa18.81■□□□□ 0.6
TPM1-211ENST00000558314 LCORLQ8N3X6 602 aa18.81■□□□□ 0.6
TPM1-211ENST00000558314 ACER1Q8TDN7 264 aa18.81■□□□□ 0.6
TPM1-211ENST00000558314 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.81■□□□□ 0.6
TPM1-211ENST00000558314 EHD4Q9H223 541 aa18.81■□□□□ 0.6
TPM1-211ENST00000558314 ARMT1Q9H993 441 aa18.81■□□□□ 0.6
TPM1-211ENST00000558314 PAG1Q9NWQ8 432 aa18.81■□□□□ 0.6
TPM1-211ENST00000558314 MORF4L1Q9UBU8 362 aa18.81■□□□□ 0.6
TPM1-211ENST00000558314 DOCK3Q8IZD9 2030 aa18.8■□□□□ 0.6
TPM1-211ENST00000558314 SMARCA5O60264 1052 aaPredicted RBP18.8■□□□□ 0.6
TPM1-211ENST00000558314 CYP2D6P10635 497 aa18.8■□□□□ 0.6
TPM1-211ENST00000558314 Q3C1V9 767 aa18.8■□□□□ 0.6
TPM1-211ENST00000558314 NUDT12Q9BQG2 462 aa18.8■□□□□ 0.6
TPM1-211ENST00000558314 RBPJLQ9UBG7 517 aa18.8■□□□□ 0.6
TPM1-211ENST00000558314 GJD2Q9UKL4 321 aa18.8■□□□□ 0.6
TPM1-211ENST00000558314 SHMT1P34896 483 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms