RNA–Protein interactions for RNA: ENST00000558126.1

LYSMD2-203, Transcript of LysM domain containing 2, humanhuman

TSL 5 BASIC

Gene LYSMD2, Length 775 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-203ENST00000558126 PNMA3Q9UL41 463 aa12.91□□□□□ -0.34
LYSMD2-203ENST00000558126 AGTPBP1Q9UPW5 1226 aa12.91□□□□□ -0.34
LYSMD2-203ENST00000558126 LRRFIP2Q9Y608 721 aaKnown RBP12.91□□□□□ -0.34
LYSMD2-203ENST00000558126 DPYSL4O14531 572 aa12.9□□□□□ -0.34
LYSMD2-203ENST00000558126 TFRCP02786 760 aaKnown RBP12.9□□□□□ -0.34
LYSMD2-203ENST00000558126 BMP8BP34820 402 aa12.9□□□□□ -0.34
LYSMD2-203ENST00000558126 FAM110CQ1W6H9 321 aa12.9□□□□□ -0.34
LYSMD2-203ENST00000558126 ALDH1L2Q3SY69 923 aa12.9□□□□□ -0.34
LYSMD2-203ENST00000558126 SSH1Q8WYL5 1049 aa12.9□□□□□ -0.34
LYSMD2-203ENST00000558126 COA7Q96BR5 231 aa12.9□□□□□ -0.34
LYSMD2-203ENST00000558126 PCDHGA10Q9Y5H3 936 aa12.9□□□□□ -0.34
LYSMD2-203ENST00000558126 E9PSI1 815 aa12.89□□□□□ -0.35
LYSMD2-203ENST00000558126 SPTY2D1Q68D10 685 aaPredicted RBP12.89□□□□□ -0.35
LYSMD2-203ENST00000558126 NECAB2Q7Z6G3 386 aa12.89□□□□□ -0.35
LYSMD2-203ENST00000558126 PROCA1Q8NCQ7 364 aaPredicted RBP12.89□□□□□ -0.35
LYSMD2-203ENST00000558126 SMCR8Q8TEV9 937 aaPredicted RBP12.89□□□□□ -0.35
LYSMD2-203ENST00000558126 ADAM33Q9BZ11 813 aa12.89□□□□□ -0.35
LYSMD2-203ENST00000558126 OSBPL5Q9H0X9 879 aaPredicted RBP12.89□□□□□ -0.35
LYSMD2-203ENST00000558126 COPRSQ9NQ92 184 aa12.89□□□□□ -0.35
LYSMD2-203ENST00000558126 ZSWIM8A7E2V4 1837 aa12.89□□□□□ -0.35
LYSMD2-203ENST00000558126 GPR75-ASB3A0A0A6YYF3 556 aa12.88□□□□□ -0.35
LYSMD2-203ENST00000558126 DDTLA6NHG4 134 aaPredicted RBP12.88□□□□□ -0.35
LYSMD2-203ENST00000558126 PHKA1P46020 1223 aa12.88□□□□□ -0.35
LYSMD2-203ENST00000558126 GCLCP48506 637 aaPredicted RBP12.88□□□□□ -0.35
LYSMD2-203ENST00000558126 CCDC102BQ68D86 513 aa12.88□□□□□ -0.35
LYSMD2-203ENST00000558126 GADL1Q6ZQY3 521 aa12.88□□□□□ -0.35
LYSMD2-203ENST00000558126 SLC17A8Q8NDX2 589 aa12.88□□□□□ -0.35
LYSMD2-203ENST00000558126 DEFB118Q96PH6 123 aa12.88□□□□□ -0.35
LYSMD2-203ENST00000558126 VPS9D1Q9Y2B5 631 aa12.88□□□□□ -0.35
LYSMD2-203ENST00000558126 ELNP15502 786 aa12.87□□□□□ -0.35
LYSMD2-203ENST00000558126 PABPC4Q13310 644 aaKnown RBP eCLIP12.87□□□□□ -0.35
LYSMD2-203ENST00000558126 DZIP1Q86YF9 867 aaKnown RBP12.87□□□□□ -0.35
LYSMD2-203ENST00000558126 ZSCAN29Q8IWY8 852 aaPredicted RBP12.87□□□□□ -0.35
LYSMD2-203ENST00000558126 ANKRD13CQ8N6S4 541 aa12.87□□□□□ -0.35
LYSMD2-203ENST00000558126 GDF15Q99988 308 aa12.87□□□□□ -0.35
LYSMD2-203ENST00000558126 DDX4Q9NQI0 724 aaKnown RBP12.87□□□□□ -0.35
LYSMD2-203ENST00000558126 LAMA3Q16787 3333 aa12.86□□□□□ -0.35
LYSMD2-203ENST00000558126 TRIM75PA6NK02 468 aa12.86□□□□□ -0.35
LYSMD2-203ENST00000558126 HMGCRP04035 888 aa12.86□□□□□ -0.35
LYSMD2-203ENST00000558126 UBTFL1P0CB47 393 aaPredicted RBP12.86□□□□□ -0.35
LYSMD2-203ENST00000558126 BTDP43251 543 aa12.86□□□□□ -0.35
LYSMD2-203ENST00000558126 RASGRF1Q13972 1273 aa12.86□□□□□ -0.35
LYSMD2-203ENST00000558126 SH3D19Q5HYK7 790 aa12.86□□□□□ -0.35
LYSMD2-203ENST00000558126 ZNF280CQ8ND82 737 aa12.86□□□□□ -0.35
LYSMD2-203ENST00000558126 PAWRQ96IZ0 340 aaKnown RBP12.86□□□□□ -0.35
LYSMD2-203ENST00000558126 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.86□□□□□ -0.35
LYSMD2-203ENST00000558126 WDR70Q9NW82 654 aa12.86□□□□□ -0.35
LYSMD2-203ENST00000558126 GJD2Q9UKL4 321 aa12.86□□□□□ -0.35
LYSMD2-203ENST00000558126 RPTORQ8N122 1335 aa12.86□□□□□ -0.35
LYSMD2-203ENST00000558126 DLL1O00548 723 aa12.85□□□□□ -0.35
LYSMD2-203ENST00000558126 CT47B1P0C2W7 299 aaPredicted RBP12.85□□□□□ -0.35
LYSMD2-203ENST00000558126 RHBDL3P58872 404 aa12.85□□□□□ -0.35
LYSMD2-203ENST00000558126 SLFN5Q08AF3 891 aa12.85□□□□□ -0.35
LYSMD2-203ENST00000558126 LRIT3Q3SXY7 679 aa12.85□□□□□ -0.35
LYSMD2-203ENST00000558126 TYW1BQ6NUM6 668 aa12.85□□□□□ -0.35
LYSMD2-203ENST00000558126 FAM9BQ8IZU0 186 aa12.85□□□□□ -0.35
LYSMD2-203ENST00000558126 NBPF3Q9H094 633 aa12.85□□□□□ -0.35
LYSMD2-203ENST00000558126 STAP2Q9UGK3 403 aa12.85□□□□□ -0.35
LYSMD2-203ENST00000558126 AKAP2Q9Y2D5 859 aa12.85□□□□□ -0.35
LYSMD2-203ENST00000558126 MROH7-TTC4A0A0A0MT08 1334 aa12.85□□□□□ -0.35
LYSMD2-203ENST00000558126 A0A0C4DFX4 3053 aa12.85□□□□□ -0.35
LYSMD2-203ENST00000558126 COL2A1P02458 1487 aaPredicted RBP12.85□□□□□ -0.35
LYSMD2-203ENST00000558126 SOX1O00570 391 aaPredicted RBP12.84□□□□□ -0.35
LYSMD2-203ENST00000558126 IGSF3O75054 1194 aa12.84□□□□□ -0.35
LYSMD2-203ENST00000558126 LDHCP07864 332 aa12.84□□□□□ -0.35
LYSMD2-203ENST00000558126 ADORA1P30542 326 aa12.84□□□□□ -0.35
LYSMD2-203ENST00000558126 SPP2Q13103 211 aa12.84□□□□□ -0.35
LYSMD2-203ENST00000558126 MVPQ14764 893 aaKnown RBP12.84□□□□□ -0.35
LYSMD2-203ENST00000558126 E2F4Q16254 413 aa12.84□□□□□ -0.35
LYSMD2-203ENST00000558126 TREML2Q5T2D2 321 aa12.84□□□□□ -0.35
LYSMD2-203ENST00000558126 ERICH6Q7L0X2 663 aa12.84□□□□□ -0.35
LYSMD2-203ENST00000558126 KCTD12Q96CX2 325 aaKnown RBP12.84□□□□□ -0.35
LYSMD2-203ENST00000558126 SIL1Q9H173 461 aa12.84□□□□□ -0.35
LYSMD2-203ENST00000558126 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.84□□□□□ -0.35
LYSMD2-203ENST00000558126 HMX1Q9NP08 348 aaPredicted RBP12.84□□□□□ -0.35
LYSMD2-203ENST00000558126 MORF4L1Q9UBU8 362 aa12.84□□□□□ -0.35
LYSMD2-203ENST00000558126 ABCF2Q9UG63 623 aa12.84□□□□□ -0.35
LYSMD2-203ENST00000558126 OGDHLQ9ULD0 1010 aa12.84□□□□□ -0.35
LYSMD2-203ENST00000558126 XRCC5P13010 732 aaKnown RBP12.83□□□□□ -0.36
LYSMD2-203ENST00000558126 CAP2P40123 477 aa12.83□□□□□ -0.36
LYSMD2-203ENST00000558126 TIMM10P62072 90 aa12.83□□□□□ -0.36
LYSMD2-203ENST00000558126 GSTO1P78417 241 aa12.83□□□□□ -0.36
LYSMD2-203ENST00000558126 MECOMQ03112 1051 aa12.83□□□□□ -0.36
LYSMD2-203ENST00000558126 MAP3K21Q5TCX8 1036 aa12.83□□□□□ -0.36
LYSMD2-203ENST00000558126 EPAS1Q99814 870 aa12.83□□□□□ -0.36
LYSMD2-203ENST00000558126 ZBED2Q9BTP6 218 aa12.83□□□□□ -0.36
LYSMD2-203ENST00000558126 WDR18Q9BV38 432 aa12.83□□□□□ -0.36
LYSMD2-203ENST00000558126 GINM1Q9NU53 330 aa12.83□□□□□ -0.36
LYSMD2-203ENST00000558126 HERC5Q9UII4 1024 aaKnown RBP12.83□□□□□ -0.36
LYSMD2-203ENST00000558126 CUL9Q8IWT3 2517 aa12.82□□□□□ -0.36
LYSMD2-203ENST00000558126 USP17L5A8MUK1 530 aa12.82□□□□□ -0.36
LYSMD2-203ENST00000558126 HOXA7P31268 230 aaPredicted RBP12.82□□□□□ -0.36
LYSMD2-203ENST00000558126 PICALMQ13492 652 aa12.82□□□□□ -0.36
LYSMD2-203ENST00000558126 MTX1Q13505 466 aa12.82□□□□□ -0.36
LYSMD2-203ENST00000558126 METTL16Q86W50 562 aaKnown RBP12.82□□□□□ -0.36
LYSMD2-203ENST00000558126 TRMT44Q8IYL2 757 aaKnown RBP12.82□□□□□ -0.36
LYSMD2-203ENST00000558126 TRMT2AQ8IZ69 625 aaKnown RBP12.82□□□□□ -0.36
LYSMD2-203ENST00000558126 DIS3LQ8TF46 1054 aaKnown RBP12.82□□□□□ -0.36
LYSMD2-203ENST00000558126 ZNF384Q8TF68 577 aa12.82□□□□□ -0.36
LYSMD2-203ENST00000558126 NSUN4Q96CB9 384 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms