RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 MTMR2Q13614 643 aa16.55■□□□□ 0.24
SNRPA1-204ENST00000558020 RRP1BQ14684 758 aaKnown RBP16.55■□□□□ 0.24
SNRPA1-204ENST00000558020 MIGA1Q8NAN2 632 aa16.55■□□□□ 0.24
SNRPA1-204ENST00000558020 DPF3Q92784 378 aa16.55■□□□□ 0.24
SNRPA1-204ENST00000558020 HTATIP2Q9BUP3 242 aa16.55■□□□□ 0.24
SNRPA1-204ENST00000558020 TAOK2Q9UL54 1235 aa16.55■□□□□ 0.24
SNRPA1-204ENST00000558020 MAST2Q6P0Q8 1798 aa16.54■□□□□ 0.24
SNRPA1-204ENST00000558020 IFIT2P09913 472 aaKnown RBP16.54■□□□□ 0.24
SNRPA1-204ENST00000558020 DYNLL1P63167 89 aaKnown RBP16.54■□□□□ 0.24
SNRPA1-204ENST00000558020 HABP4Q5JVS0 413 aaKnown RBP16.54■□□□□ 0.24
SNRPA1-204ENST00000558020 RHPN1Q8TCX5 695 aa16.54■□□□□ 0.24
SNRPA1-204ENST00000558020 KIF1BPQ96EK5 621 aa16.54■□□□□ 0.24
SNRPA1-204ENST00000558020 SERPINB13Q9UIV8 391 aa16.54■□□□□ 0.24
SNRPA1-204ENST00000558020 RAB11FIP3O75154 756 aa16.53■□□□□ 0.24
SNRPA1-204ENST00000558020 SGPL1O95470 568 aa16.53■□□□□ 0.24
SNRPA1-204ENST00000558020 TFRCP02786 760 aaKnown RBP16.53■□□□□ 0.24
SNRPA1-204ENST00000558020 INHAP05111 366 aa16.53■□□□□ 0.24
SNRPA1-204ENST00000558020 ELNP15502 786 aa16.53■□□□□ 0.24
SNRPA1-204ENST00000558020 CCAR1Q8IX12 1150 aaKnown RBP16.53■□□□□ 0.24
SNRPA1-204ENST00000558020 U2AF1L4Q8WU68 220 aaKnown RBP16.53■□□□□ 0.24
SNRPA1-204ENST00000558020 GTF3C2Q8WUA4 911 aaPredicted RBP16.53■□□□□ 0.24
SNRPA1-204ENST00000558020 UNC93B1Q9H1C4 597 aa16.53■□□□□ 0.24
SNRPA1-204ENST00000558020 IL1RAPL2Q9NP60 686 aa16.53■□□□□ 0.24
SNRPA1-204ENST00000558020 ZBTB21Q9ULJ3 1066 aa16.53■□□□□ 0.24
SNRPA1-204ENST00000558020 ATAD5Q96QE3 1844 aa16.52■□□□□ 0.24
SNRPA1-204ENST00000558020 GDF11O95390 407 aa16.52■□□□□ 0.24
SNRPA1-204ENST00000558020 SLC9C2Q5TAH2 1124 aa16.52■□□□□ 0.24
SNRPA1-204ENST00000558020 USP17L2Q6R6M4 530 aa16.52■□□□□ 0.24
SNRPA1-204ENST00000558020 GPRC5AQ8NFJ5 357 aa16.52■□□□□ 0.24
SNRPA1-204ENST00000558020 EHD4Q9H223 541 aa16.52■□□□□ 0.24
SNRPA1-204ENST00000558020 CABP5Q9NP86 173 aa16.52■□□□□ 0.24
SNRPA1-204ENST00000558020 MORF4L1Q9UBU8 362 aa16.52■□□□□ 0.24
SNRPA1-204ENST00000558020 NR2E3Q9Y5X4 410 aa16.52■□□□□ 0.24
SNRPA1-204ENST00000558020 MAGEB6P1A0A0J9YX57 407 aa16.51■□□□□ 0.23
SNRPA1-204ENST00000558020 APBB1O00213 710 aa16.51■□□□□ 0.23
SNRPA1-204ENST00000558020 CERKLQ49MI3 558 aaPredicted RBP16.51■□□□□ 0.23
SNRPA1-204ENST00000558020 TATDN1Q6P1N9 297 aa16.51■□□□□ 0.23
SNRPA1-204ENST00000558020 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.51■□□□□ 0.23
SNRPA1-204ENST00000558020 SHISA4Q96DD7 197 aa16.51■□□□□ 0.23
SNRPA1-204ENST00000558020 P2RX7Q99572 595 aaKnown RBP16.51■□□□□ 0.23
SNRPA1-204ENST00000558020 CRNKL1Q9BZJ0 848 aaKnown RBP16.51■□□□□ 0.23
SNRPA1-204ENST00000558020 ANTXR1Q9H6X2 564 aa16.51■□□□□ 0.23
SNRPA1-204ENST00000558020 DNAJC18Q9H819 358 aa16.51■□□□□ 0.23
SNRPA1-204ENST00000558020 ZBTB40Q9NUA8 1239 aa16.51■□□□□ 0.23
SNRPA1-204ENST00000558020 NDUFB9Q9Y6M9 179 aa16.51■□□□□ 0.23
SNRPA1-204ENST00000558020 H0YGN5 161 aa16.5■□□□□ 0.23
SNRPA1-204ENST00000558020 FARP2O94887 1054 aaPredicted RBP16.5■□□□□ 0.23
SNRPA1-204ENST00000558020 GH2P01242 217 aa16.5■□□□□ 0.23
SNRPA1-204ENST00000558020 POLR3DP05423 398 aaPredicted RBP16.5■□□□□ 0.23
SNRPA1-204ENST00000558020 USP14P54578 494 aa16.5■□□□□ 0.23
SNRPA1-204ENST00000558020 HERVK_113P62684 666 aa16.5■□□□□ 0.23
SNRPA1-204ENST00000558020 JAG1P78504 1218 aa16.5■□□□□ 0.23
SNRPA1-204ENST00000558020 DEFB118Q96PH6 123 aa16.5■□□□□ 0.23
SNRPA1-204ENST00000558020 FEZ1Q99689 392 aa16.5■□□□□ 0.23
SNRPA1-204ENST00000558020 COG6Q9Y2V7 657 aa16.5■□□□□ 0.23
SNRPA1-204ENST00000558020 LOC285556D6RIA3 1793 aa16.5■□□□□ 0.23
SNRPA1-204ENST00000558020 HMGCRP04035 888 aa16.49■□□□□ 0.23
SNRPA1-204ENST00000558020 MAPK4P31152 587 aa16.49■□□□□ 0.23
SNRPA1-204ENST00000558020 PDE3AQ14432 1141 aa16.49■□□□□ 0.23
SNRPA1-204ENST00000558020 RAB3GAP1Q15042 981 aa16.49■□□□□ 0.23
SNRPA1-204ENST00000558020 ABCB5Q2M3G0 1257 aa16.49■□□□□ 0.23
SNRPA1-204ENST00000558020 TRMT44Q8IYL2 757 aaKnown RBP16.49■□□□□ 0.23
SNRPA1-204ENST00000558020 BCL11AQ9H165 835 aa16.49■□□□□ 0.23
SNRPA1-204ENST00000558020 RCAN3Q9UKA8 241 aa16.49■□□□□ 0.23
SNRPA1-204ENST00000558020 GJD2Q9UKL4 321 aa16.49■□□□□ 0.23
SNRPA1-204ENST00000558020 MYO5AQ9Y4I1 1855 aaKnown RBP16.49■□□□□ 0.23
SNRPA1-204ENST00000558020 FOCADQ5VW36 1801 aa16.49■□□□□ 0.23
SNRPA1-204ENST00000558020 GOLIM4O00461 696 aa16.48■□□□□ 0.23
SNRPA1-204ENST00000558020 UBE2Q1Q7Z7E8 422 aa16.48■□□□□ 0.23
SNRPA1-204ENST00000558020 SOCS4Q8WXH5 440 aa16.48■□□□□ 0.23
SNRPA1-204ENST00000558020 DNAJC2Q99543 621 aaKnown RBP16.48■□□□□ 0.23
SNRPA1-204ENST00000558020 NUDT12Q9BQG2 462 aa16.48■□□□□ 0.23
SNRPA1-204ENST00000558020 CWC22Q9HCG8 908 aaKnown RBP16.48■□□□□ 0.23
SNRPA1-204ENST00000558020 HMX1Q9NP08 348 aaPredicted RBP16.48■□□□□ 0.23
SNRPA1-204ENST00000558020 PAK6Q9NQU5 681 aaPredicted RBP16.48■□□□□ 0.23
SNRPA1-204ENST00000558020 EMILIN3Q9NT22 766 aa16.48■□□□□ 0.23
SNRPA1-204ENST00000558020 COLQQ9Y215 455 aaPredicted RBP16.48■□□□□ 0.23
SNRPA1-204ENST00000558020 CDK5RAP2Q96SN8 1893 aa16.48■□□□□ 0.23
SNRPA1-204ENST00000558020 USP17L15C9J2P7 530 aa16.47■□□□□ 0.23
SNRPA1-204ENST00000558020 USP17L13C9JLJ4 530 aa16.47■□□□□ 0.23
SNRPA1-204ENST00000558020 USP17L11C9JVI0 530 aa16.47■□□□□ 0.23
SNRPA1-204ENST00000558020 USP17L18D6R9N7 530 aa16.47■□□□□ 0.23
SNRPA1-204ENST00000558020 USP17L22D6RA61 530 aa16.47■□□□□ 0.23
SNRPA1-204ENST00000558020 USP17L17D6RBQ6 530 aa16.47■□□□□ 0.23
SNRPA1-204ENST00000558020 USP17L19D6RCP7 530 aa16.47■□□□□ 0.23
SNRPA1-204ENST00000558020 USP17L20D6RJB6 530 aa16.47■□□□□ 0.23
SNRPA1-204ENST00000558020 GLRX3O76003 335 aaKnown RBP16.47■□□□□ 0.23
SNRPA1-204ENST00000558020 XRCC5P13010 732 aaKnown RBP16.47■□□□□ 0.23
SNRPA1-204ENST00000558020 PDE6AP16499 860 aa16.47■□□□□ 0.23
SNRPA1-204ENST00000558020 CCNA1P78396 465 aa16.47■□□□□ 0.23
SNRPA1-204ENST00000558020 USP17L24Q0WX57 530 aa16.47■□□□□ 0.23
SNRPA1-204ENST00000558020 RIOK1Q9BRS2 568 aaKnown RBP16.47■□□□□ 0.23
SNRPA1-204ENST00000558020 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.47■□□□□ 0.23
SNRPA1-204ENST00000558020 MCM9Q9NXL9 1143 aa16.47■□□□□ 0.23
SNRPA1-204ENST00000558020 RBPJLQ9UBG7 517 aa16.47■□□□□ 0.23
SNRPA1-204ENST00000558020 MYH1P12882 1939 aa16.47■□□□□ 0.23
SNRPA1-204ENST00000558020 RPTORQ8N122 1335 aa16.46■□□□□ 0.23
SNRPA1-204ENST00000558020 ANKLE1Q8NAG6 615 aa16.46■□□□□ 0.23
SNRPA1-204ENST00000558020 DDRGK1Q96HY6 314 aa16.46■□□□□ 0.23
SNRPA1-204ENST00000558020 C12orf42Q96LP6 360 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms