RNA–Protein interactions for RNA: ENST00000557948.1

TRPM1-204, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-204ENST00000557948 PLXNB2O15031 1838 aa7.45□□□□□ -1.22
TRPM1-204ENST00000557948 RPAP1Q9BWH6 1393 aaPredicted RBP7.45□□□□□ -1.22
TRPM1-204ENST00000557948 GFRA3O60609 400 aa7.44□□□□□ -1.22
TRPM1-204ENST00000557948 PDE8AO60658 829 aa7.44□□□□□ -1.22
TRPM1-204ENST00000557948 OATP04181 439 aa7.44□□□□□ -1.22
TRPM1-204ENST00000557948 ALADP13716 330 aa7.44□□□□□ -1.22
TRPM1-204ENST00000557948 ZKSCAN1P17029 563 aaPredicted RBP7.44□□□□□ -1.22
TRPM1-204ENST00000557948 CYP2B6P20813 491 aa7.44□□□□□ -1.22
TRPM1-204ENST00000557948 PBX2P40425 430 aa7.44□□□□□ -1.22
TRPM1-204ENST00000557948 EPHB4P54760 987 aa7.44□□□□□ -1.22
TRPM1-204ENST00000557948 PRSS12P56730 875 aa7.44□□□□□ -1.22
TRPM1-204ENST00000557948 CACNB2Q08289 660 aaPredicted RBP7.44□□□□□ -1.22
TRPM1-204ENST00000557948 MIGA2Q7L4E1 593 aa7.44□□□□□ -1.22
TRPM1-204ENST00000557948 TRMT44Q8IYL2 757 aaKnown RBP7.44□□□□□ -1.22
TRPM1-204ENST00000557948 DZIP1LQ8IYY4 767 aaKnown RBP7.44□□□□□ -1.22
TRPM1-204ENST00000557948 PLBD2Q8NHP8 589 aa7.44□□□□□ -1.22
TRPM1-204ENST00000557948 CDCA7LQ96GN5 454 aa7.44□□□□□ -1.22
TRPM1-204ENST00000557948 CCDC136Q96JN2 1154 aa7.44□□□□□ -1.22
TRPM1-204ENST00000557948 ZSWIM6Q9HCJ5 1215 aa7.44□□□□□ -1.22
TRPM1-204ENST00000557948 GOPCQ9HD26 462 aa7.44□□□□□ -1.22
TRPM1-204ENST00000557948 PDLIM7Q9NR12 457 aa7.44□□□□□ -1.22
TRPM1-204ENST00000557948 SERPINA10Q9UK55 444 aa7.44□□□□□ -1.22
TRPM1-204ENST00000557948 COG5Q9UP83 839 aa7.44□□□□□ -1.22
TRPM1-204ENST00000557948 PTPRFP10586 1907 aa7.44□□□□□ -1.22
TRPM1-204ENST00000557948 DLG5Q8TDM6 1919 aa7.44□□□□□ -1.22
TRPM1-204ENST00000557948 EPG5Q9HCE0 2579 aa7.43□□□□□ -1.22
TRPM1-204ENST00000557948 MYH3P11055 1940 aa7.43□□□□□ -1.22
TRPM1-204ENST00000557948 CHD7Q9P2D1 2997 aa7.43□□□□□ -1.22
TRPM1-204ENST00000557948 PTPRZ1P23471 2315 aaPredicted RBP7.43□□□□□ -1.22
TRPM1-204ENST00000557948 A0A0G2JLL6 359 aaPredicted RBP7.43□□□□□ -1.22
TRPM1-204ENST00000557948 TRIM43BA6NCK2 446 aa7.43□□□□□ -1.22
TRPM1-204ENST00000557948 DNM1LO00429 736 aa7.43□□□□□ -1.22
TRPM1-204ENST00000557948 FPGSQ05932 587 aa7.43□□□□□ -1.22
TRPM1-204ENST00000557948 SLC39A5Q6ZMH5 540 aa7.43□□□□□ -1.22
TRPM1-204ENST00000557948 SH3RF1Q7Z6J0 888 aa7.43□□□□□ -1.22
TRPM1-204ENST00000557948 PRRT2Q7Z6L0 340 aaPredicted RBP7.43□□□□□ -1.22
TRPM1-204ENST00000557948 TRIM43Q96BQ3 446 aaPredicted RBP7.43□□□□□ -1.22
TRPM1-204ENST00000557948 PCMTD1Q96MG8 357 aaPredicted RBP7.43□□□□□ -1.22
TRPM1-204ENST00000557948 ANKRD2Q9GZV1 360 aa7.43□□□□□ -1.22
TRPM1-204ENST00000557948 SCUBE2Q9NQ36 999 aa7.43□□□□□ -1.22
TRPM1-204ENST00000557948 MSRAQ9UJ68 235 aa7.43□□□□□ -1.22
TRPM1-204ENST00000557948 TTF2Q9UNY4 1162 aaKnown RBP7.43□□□□□ -1.22
TRPM1-204ENST00000557948 JAG2Q9Y219 1238 aa7.43□□□□□ -1.22
TRPM1-204ENST00000557948 ZFHX2Q9C0A1 2572 aaPredicted RBP7.43□□□□□ -1.22
TRPM1-204ENST00000557948 CHD8Q9HCK8 2581 aa7.43□□□□□ -1.22
TRPM1-204ENST00000557948 PRRC2BQ5JSZ5 2229 aaKnown RBP7.43□□□□□ -1.22
TRPM1-204ENST00000557948 GBF1Q92538 1859 aa7.43□□□□□ -1.22
TRPM1-204ENST00000557948 KMT2BQ9UMN6 2715 aaPredicted RBP7.42□□□□□ -1.22
TRPM1-204ENST00000557948 GRXCR1A8MXD5 290 aa7.42□□□□□ -1.22
TRPM1-204ENST00000557948 C3orf80F5H4A9 247 aa7.42□□□□□ -1.22
TRPM1-204ENST00000557948 RAG1P15918 1043 aa7.42□□□□□ -1.22
TRPM1-204ENST00000557948 CACNB3P54284 484 aa7.42□□□□□ -1.22
TRPM1-204ENST00000557948 TRIM28Q13263 835 aaKnown RBP7.42□□□□□ -1.22
TRPM1-204ENST00000557948 RAB30Q15771 203 aa7.42□□□□□ -1.22
TRPM1-204ENST00000557948 TRIM60Q495X7 471 aa7.42□□□□□ -1.22
TRPM1-204ENST00000557948 SH3D19Q5HYK7 790 aa7.42□□□□□ -1.22
TRPM1-204ENST00000557948 NUDT12Q9BQG2 462 aa7.42□□□□□ -1.22
TRPM1-204ENST00000557948 CD320Q9NPF0 282 aa7.42□□□□□ -1.22
TRPM1-204ENST00000557948 TMOD2Q9NZR1 351 aa7.42□□□□□ -1.22
TRPM1-204ENST00000557948 PNMA3Q9UL41 463 aa7.42□□□□□ -1.22
TRPM1-204ENST00000557948 TRANK1O15050 2925 aa7.41□□□□□ -1.22
TRPM1-204ENST00000557948 RGS20O76081 388 aa7.41□□□□□ -1.22
TRPM1-204ENST00000557948 XRCC5P13010 732 aaKnown RBP7.41□□□□□ -1.22
TRPM1-204ENST00000557948 IGHMBP2P38935 993 aaKnown RBP7.41□□□□□ -1.22
TRPM1-204ENST00000557948 ANP32AP39687 249 aaKnown RBP7.41□□□□□ -1.22
TRPM1-204ENST00000557948 CRKP46108 304 aa7.41□□□□□ -1.22
TRPM1-204ENST00000557948 PTPN5P54829 565 aa7.41□□□□□ -1.22
TRPM1-204ENST00000557948 NOL9Q5SY16 702 aaKnown RBP7.41□□□□□ -1.22
TRPM1-204ENST00000557948 ZNF804AQ7Z570 1209 aa7.41□□□□□ -1.22
TRPM1-204ENST00000557948 FAM83AQ86UY5 434 aa7.41□□□□□ -1.22
TRPM1-204ENST00000557948 GJD3Q8N144 294 aa7.41□□□□□ -1.22
TRPM1-204ENST00000557948 PROCA1Q8NCQ7 364 aaPredicted RBP7.41□□□□□ -1.22
TRPM1-204ENST00000557948 SOCS4Q8WXH5 440 aa7.41□□□□□ -1.22
TRPM1-204ENST00000557948 LPAR1Q92633 364 aa7.41□□□□□ -1.22
TRPM1-204ENST00000557948 HLA-CQ95604 372 aa7.41□□□□□ -1.22
TRPM1-204ENST00000557948 IPO9Q96P70 1041 aaKnown RBP7.41□□□□□ -1.22
TRPM1-204ENST00000557948 SLC28A3Q9HAS3 691 aa7.41□□□□□ -1.22
TRPM1-204ENST00000557948 POLR3EQ9NVU0 708 aa7.41□□□□□ -1.22
TRPM1-204ENST00000557948 TACC3Q9Y6A5 838 aa7.41□□□□□ -1.22
TRPM1-204ENST00000557948 ZHX2Q9Y6X8 837 aa7.41□□□□□ -1.22
TRPM1-204ENST00000557948 MYBBP1AQ9BQG0 1328 aaKnown RBP7.41□□□□□ -1.22
TRPM1-204ENST00000557948 A0A0G2JMZ2 1700 aa7.41□□□□□ -1.22
TRPM1-204ENST00000557948 KBTBD13C9JR72 458 aa7.4□□□□□ -1.22
TRPM1-204ENST00000557948 MSCO60682 206 aa7.4□□□□□ -1.22
TRPM1-204ENST00000557948 IL1R1P14778 569 aa7.4□□□□□ -1.22
TRPM1-204ENST00000557948 GCLCP48506 637 aaPredicted RBP7.4□□□□□ -1.22
TRPM1-204ENST00000557948 PPP4R3BQ5MIZ7 849 aa7.4□□□□□ -1.22
TRPM1-204ENST00000557948 MFSD14BQ5SR56 506 aa7.4□□□□□ -1.22
TRPM1-204ENST00000557948 GJC2Q5T442 439 aaPredicted RBP7.4□□□□□ -1.22
TRPM1-204ENST00000557948 MFSD14AQ96MC6 490 aa7.4□□□□□ -1.22
TRPM1-204ENST00000557948 NKX2-4Q9H2Z4 354 aa7.4□□□□□ -1.22
TRPM1-204ENST00000557948 DDX20Q9UHI6 824 aaKnown RBP7.4□□□□□ -1.22
TRPM1-204ENST00000557948 TSPYL4Q9UJ04 414 aa7.4□□□□□ -1.22
TRPM1-204ENST00000557948 ZNF112Q9UJU3 913 aa7.4□□□□□ -1.22
TRPM1-204ENST00000557948 AGTPBP1Q9UPW5 1226 aa7.4□□□□□ -1.22
TRPM1-204ENST00000557948 NUDCQ9Y266 331 aa7.4□□□□□ -1.22
TRPM1-204ENST00000557948 PCCAP05165 728 aaPredicted RBP7.39□□□□□ -1.23
TRPM1-204ENST00000557948 CLTBP09497 229 aa7.39□□□□□ -1.23
TRPM1-204ENST00000557948 CNGA1P29973 690 aa7.39□□□□□ -1.23
TRPM1-204ENST00000557948 RGS2P41220 211 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms