RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 MFSD6Q6ZSS7 791 aa18.12■□□□□ 0.49
NEDD1-213ENST00000557644 CTNND1O60716 968 aaKnown RBP18.12■□□□□ 0.49
NEDD1-213ENST00000557644 FGRP09769 529 aa18.12■□□□□ 0.49
NEDD1-213ENST00000557644 HSPA4P34932 840 aa18.12■□□□□ 0.49
NEDD1-213ENST00000557644 FAM47AQ5JRC9 791 aa18.12■□□□□ 0.49
NEDD1-213ENST00000557644 CCDC84Q86UT8 332 aaPredicted RBP18.12■□□□□ 0.49
NEDD1-213ENST00000557644 ANKRD13AQ8IZ07 590 aa18.12■□□□□ 0.49
NEDD1-213ENST00000557644 LAMA4Q16363 1823 aa18.12■□□□□ 0.49
NEDD1-213ENST00000557644 CEP350Q5VT06 3117 aa18.11■□□□□ 0.49
NEDD1-213ENST00000557644 GH2P01242 217 aa18.11■□□□□ 0.49
NEDD1-213ENST00000557644 COL9A3Q14050 684 aaPredicted RBP18.11■□□□□ 0.49
NEDD1-213ENST00000557644 SNCAIPQ9Y6H5 919 aa18.11■□□□□ 0.49
NEDD1-213ENST00000557644 TLL2Q9Y6L7 1015 aa18.11■□□□□ 0.49
NEDD1-213ENST00000557644 OTOFQ9HC10 1997 aa18.11■□□□□ 0.49
NEDD1-213ENST00000557644 E7EWF7 191 aa18.11■□□□□ 0.49
NEDD1-213ENST00000557644 MPHOSPH10O00566 681 aaKnown RBP18.11■□□□□ 0.49
NEDD1-213ENST00000557644 CNKSR2Q8WXI2 1034 aa18.11■□□□□ 0.49
NEDD1-213ENST00000557644 BACH2Q9BYV9 841 aa18.11■□□□□ 0.49
NEDD1-213ENST00000557644 ELP3Q9H9T3 547 aa18.11■□□□□ 0.49
NEDD1-213ENST00000557644 CSADQ9Y600 493 aa18.11■□□□□ 0.49
NEDD1-213ENST00000557644 PCNTO95613 3336 aa18.11■□□□□ 0.49
NEDD1-213ENST00000557644 RANBP6O60518 1105 aaKnown RBP18.1■□□□□ 0.49
NEDD1-213ENST00000557644 ABCB5Q2M3G0 1257 aa18.1■□□□□ 0.49
NEDD1-213ENST00000557644 SCYL3Q8IZE3 742 aa18.1■□□□□ 0.49
NEDD1-213ENST00000557644 ZNF444Q8N0Y2 327 aaPredicted RBP18.1■□□□□ 0.49
NEDD1-213ENST00000557644 ZNF287Q9HBT7 754 aa18.1■□□□□ 0.49
NEDD1-213ENST00000557644 B4E1Z4 1266 aa18.1■□□□□ 0.49
NEDD1-213ENST00000557644 ORC4O43929 436 aa18.1■□□□□ 0.49
NEDD1-213ENST00000557644 RNF20Q5VTR2 975 aa18.1■□□□□ 0.49
NEDD1-213ENST00000557644 CLEC10AQ8IUN9 316 aa18.1■□□□□ 0.49
NEDD1-213ENST00000557644 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.1■□□□□ 0.49
NEDD1-213ENST00000557644 RNF41Q9H4P4 317 aaPredicted RBP18.1■□□□□ 0.49
NEDD1-213ENST00000557644 CREBZFQ9NS37 354 aa18.1■□□□□ 0.49
NEDD1-213ENST00000557644 TAOK2Q9UL54 1235 aa18.1■□□□□ 0.49
NEDD1-213ENST00000557644 ZBTB21Q9ULJ3 1066 aa18.1■□□□□ 0.49
NEDD1-213ENST00000557644 EPB41L2O43491 1005 aaKnown RBP18.09■□□□□ 0.49
NEDD1-213ENST00000557644 GUCY1A2P33402 732 aa18.09■□□□□ 0.49
NEDD1-213ENST00000557644 TFAP4Q01664 338 aa18.09■□□□□ 0.49
NEDD1-213ENST00000557644 NOL9Q5SY16 702 aaKnown RBP18.09■□□□□ 0.49
NEDD1-213ENST00000557644 RAB3GAP1Q15042 981 aa18.09■□□□□ 0.49
NEDD1-213ENST00000557644 ADCK5Q3MIX3 580 aa18.09■□□□□ 0.49
NEDD1-213ENST00000557644 SNX14Q9Y5W7 946 aa18.09■□□□□ 0.49
NEDD1-213ENST00000557644 PTPRAP18433 802 aa18.08■□□□□ 0.48
NEDD1-213ENST00000557644 SEPT2Q15019 361 aa18.08■□□□□ 0.48
NEDD1-213ENST00000557644 KCNB2Q92953 911 aa18.08■□□□□ 0.48
NEDD1-213ENST00000557644 SLC10A4Q96EP9 437 aa18.08■□□□□ 0.48
NEDD1-213ENST00000557644 CCDC17Q96LX7 622 aa18.08■□□□□ 0.48
NEDD1-213ENST00000557644 PICK1Q9NRD5 415 aa18.08■□□□□ 0.48
NEDD1-213ENST00000557644 TSPY2A6NKD2 308 aa18.08■□□□□ 0.48
NEDD1-213ENST00000557644 NMT2O60551 498 aa18.08■□□□□ 0.48
NEDD1-213ENST00000557644 KDM4AO75164 1064 aa18.08■□□□□ 0.48
NEDD1-213ENST00000557644 ASNSP08243 561 aa18.08■□□□□ 0.48
NEDD1-213ENST00000557644 PCP11498 1178 aaKnown RBP18.08■□□□□ 0.48
NEDD1-213ENST00000557644 ZKSCAN1P17029 563 aaPredicted RBP18.08■□□□□ 0.48
NEDD1-213ENST00000557644 TSPY3P0CV98 308 aa18.07■□□□□ 0.48
NEDD1-213ENST00000557644 TSPY8P0CW00 308 aa18.07■□□□□ 0.48
NEDD1-213ENST00000557644 CABP5Q9NP86 173 aa18.07■□□□□ 0.48
NEDD1-213ENST00000557644 ZSWIM5Q9P217 1185 aa18.07■□□□□ 0.48
NEDD1-213ENST00000557644 ZNF157P51786 506 aaPredicted RBP18.06■□□□□ 0.48
NEDD1-213ENST00000557644 MKRN3Q13064 507 aaKnown RBP18.06■□□□□ 0.48
NEDD1-213ENST00000557644 TSGA10IPQ3SY00 556 aa18.06■□□□□ 0.48
NEDD1-213ENST00000557644 RGMBQ6NW40 437 aa18.06■□□□□ 0.48
NEDD1-213ENST00000557644 TMEM179Q6ZVK1 233 aa18.06■□□□□ 0.48
NEDD1-213ENST00000557644 ESR2Q92731 530 aa18.06■□□□□ 0.48
NEDD1-213ENST00000557644 OPTNQ96CV9 577 aa18.06■□□□□ 0.48
NEDD1-213ENST00000557644 OTUD5Q96G74 571 aa18.06■□□□□ 0.48
NEDD1-213ENST00000557644 MYH8P13535 1937 aa18.06■□□□□ 0.48
NEDD1-213ENST00000557644 EIF5BO60841 1220 aaKnown RBP18.06■□□□□ 0.48
NEDD1-213ENST00000557644 GJA5P36382 358 aa18.06■□□□□ 0.48
NEDD1-213ENST00000557644 TRDNQ13061 729 aa18.06■□□□□ 0.48
NEDD1-213ENST00000557644 CHST3Q7LGC8 479 aa18.06■□□□□ 0.48
NEDD1-213ENST00000557644 ZKSCAN3Q9BRR0 538 aa18.06■□□□□ 0.48
NEDD1-213ENST00000557644 KRT23Q9C075 422 aa18.06■□□□□ 0.48
NEDD1-213ENST00000557644 CNNM2Q9H8M5 875 aa18.06■□□□□ 0.48
NEDD1-213ENST00000557644 IL17RBQ9NRM6 502 aa18.06■□□□□ 0.48
NEDD1-213ENST00000557644 ZHX2Q9Y6X8 837 aa18.06■□□□□ 0.48
NEDD1-213ENST00000557644 UNCXA6NJT0 531 aa18.05■□□□□ 0.48
NEDD1-213ENST00000557644 MCCP23508 829 aa18.05■□□□□ 0.48
NEDD1-213ENST00000557644 CYB5R4Q7L1T6 521 aa18.05■□□□□ 0.48
NEDD1-213ENST00000557644 NEDD1Q8NHV4 660 aa18.05■□□□□ 0.48
NEDD1-213ENST00000557644 NCOA7Q8NI08 942 aa18.05■□□□□ 0.48
NEDD1-213ENST00000557644 DOCK1Q14185 1865 aa18.05■□□□□ 0.48
NEDD1-213ENST00000557644 SPDYE5A6NIY4 337 aa18.05■□□□□ 0.48
NEDD1-213ENST00000557644 HSPA6P17066 643 aa18.05■□□□□ 0.48
NEDD1-213ENST00000557644 GRM1Q13255 1194 aa18.05■□□□□ 0.48
NEDD1-213ENST00000557644 PAXIP1Q6ZW49 1069 aaPredicted RBP18.05■□□□□ 0.48
NEDD1-213ENST00000557644 RALYLQ86SE5 291 aaKnown RBP18.05■□□□□ 0.48
NEDD1-213ENST00000557644 CEP95Q96GE4 821 aa18.05■□□□□ 0.48
NEDD1-213ENST00000557644 ATAD5Q96QE3 1844 aa18.04■□□□□ 0.48
NEDD1-213ENST00000557644 USP17L5A8MUK1 530 aa18.04■□□□□ 0.48
NEDD1-213ENST00000557644 CPA1P15085 419 aa18.04■□□□□ 0.48
NEDD1-213ENST00000557644 CYP4F22Q6NT55 531 aa18.04■□□□□ 0.48
NEDD1-213ENST00000557644 ERO1BQ86YB8 467 aa18.04■□□□□ 0.48
NEDD1-213ENST00000557644 RASAL3Q86YV0 1011 aa18.04■□□□□ 0.48
NEDD1-213ENST00000557644 SIAH1Q8IUQ4 282 aa18.04■□□□□ 0.48
NEDD1-213ENST00000557644 MB21D2Q8IYB1 491 aaPredicted RBP18.04■□□□□ 0.48
NEDD1-213ENST00000557644 IGKV6D-41A0A0C4DH26 115 aa18.04■□□□□ 0.48
NEDD1-213ENST00000557644 IRF6O14896 467 aa18.04■□□□□ 0.48
NEDD1-213ENST00000557644 ACER1Q8TDN7 264 aa18.04■□□□□ 0.48
NEDD1-213ENST00000557644 JAKMIP1Q96N16 626 aaKnown RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms