RNA–Protein interactions for RNA: ENST00000557418.1

FOXA1-205, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 392 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-205ENST00000557418 ATAD5Q96QE3 1844 aa25.42■■□□□ 1.66
FOXA1-205ENST00000557418 PTPRFP10586 1907 aa25.41■■□□□ 1.66
FOXA1-205ENST00000557418 ERC2O15083 957 aa25.41■■□□□ 1.66
FOXA1-205ENST00000557418 GLRX3O76003 335 aaKnown RBP25.41■■□□□ 1.66
FOXA1-205ENST00000557418 ECM2O94769 699 aaPredicted RBP25.41■■□□□ 1.66
FOXA1-205ENST00000557418 GNRH1P01148 92 aa25.41■■□□□ 1.66
FOXA1-205ENST00000557418 CRNKL1Q9BZJ0 848 aaKnown RBP25.41■■□□□ 1.66
FOXA1-205ENST00000557418 ARHGAP39Q9C0H5 1083 aa25.41■■□□□ 1.66
FOXA1-205ENST00000557418 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.41■■□□□ 1.66
FOXA1-205ENST00000557418 DNAJC18Q9H819 358 aa25.41■■□□□ 1.66
FOXA1-205ENST00000557418 SIPA1L1O43166 1804 aa25.4■■□□□ 1.66
FOXA1-205ENST00000557418 TCRBV5S4A2TA0A5A2 114 aa25.4■■□□□ 1.66
FOXA1-205ENST00000557418 PROCA1Q8NCQ7 364 aaPredicted RBP25.4■■□□□ 1.66
FOXA1-205ENST00000557418 AGTPBP1Q9UPW5 1226 aa25.4■■□□□ 1.66
FOXA1-205ENST00000557418 ADGRA2Q96PE1 1338 aa25.39■■□□□ 1.66
FOXA1-205ENST00000557418 POLR3DP05423 398 aaPredicted RBP25.39■■□□□ 1.66
FOXA1-205ENST00000557418 PSMC4P43686 418 aa25.39■■□□□ 1.66
FOXA1-205ENST00000557418 WDR18Q9BV38 432 aa25.39■■□□□ 1.66
FOXA1-205ENST00000557418 SERPINB13Q9UIV8 391 aa25.39■■□□□ 1.66
FOXA1-205ENST00000557418 GDF11O95390 407 aa25.38■■□□□ 1.65
FOXA1-205ENST00000557418 FMNL1O95466 1100 aaPredicted RBP25.38■■□□□ 1.65
FOXA1-205ENST00000557418 HOXD10P28358 340 aa25.38■■□□□ 1.65
FOXA1-205ENST00000557418 ADD2P35612 726 aa25.38■■□□□ 1.65
FOXA1-205ENST00000557418 HMGCS2P54868 508 aa25.38■■□□□ 1.65
FOXA1-205ENST00000557418 PRMT2P55345 433 aa25.38■■□□□ 1.65
FOXA1-205ENST00000557418 JAG1P78504 1218 aa25.38■■□□□ 1.65
FOXA1-205ENST00000557418 SMCR8Q8TEV9 937 aaPredicted RBP25.38■■□□□ 1.65
FOXA1-205ENST00000557418 PNMA3Q9UL41 463 aa25.38■■□□□ 1.65
FOXA1-205ENST00000557418 PTCH2Q9Y6C5 1203 aa25.38■■□□□ 1.65
FOXA1-205ENST00000557418 BCRP11274 1271 aa25.37■■□□□ 1.65
FOXA1-205ENST00000557418 PABPC4Q13310 644 aaKnown RBP eCLIP25.37■■□□□ 1.65
FOXA1-205ENST00000557418 TREML2Q5T2D2 321 aa25.37■■□□□ 1.65
FOXA1-205ENST00000557418 TTC22Q5TAA0 569 aa25.37■■□□□ 1.65
FOXA1-205ENST00000557418 NBPF11Q86T75 865 aa25.37■■□□□ 1.65
FOXA1-205ENST00000557418 EHD4Q9H223 541 aa25.37■■□□□ 1.65
FOXA1-205ENST00000557418 GSPT1P15170 499 aaKnown RBP25.36■■□□□ 1.65
FOXA1-205ENST00000557418 PLCD1P51178 756 aa25.36■■□□□ 1.65
FOXA1-205ENST00000557418 SH3D19Q5HYK7 790 aa25.36■■□□□ 1.65
FOXA1-205ENST00000557418 ZSCAN25Q6NSZ9 544 aa25.36■■□□□ 1.65
FOXA1-205ENST00000557418 TATDN1Q6P1N9 297 aa25.36■■□□□ 1.65
FOXA1-205ENST00000557418 LCORLQ8N3X6 602 aa25.36■■□□□ 1.65
FOXA1-205ENST00000557418 ARMC5Q96C12 935 aa25.36■■□□□ 1.65
FOXA1-205ENST00000557418 MCM9Q9NXL9 1143 aa25.36■■□□□ 1.65
FOXA1-205ENST00000557418 ZBTB21Q9ULJ3 1066 aa25.36■■□□□ 1.65
FOXA1-205ENST00000557418 C19orf81C9J6K1 198 aa25.35■■□□□ 1.65
FOXA1-205ENST00000557418 OSBPP22059 807 aa25.35■■□□□ 1.65
FOXA1-205ENST00000557418 BACE1P56817 501 aa25.35■■□□□ 1.65
FOXA1-205ENST00000557418 SLC9C1Q4G0N8 1177 aa25.35■■□□□ 1.65
FOXA1-205ENST00000557418 TRIM47Q96LD4 638 aa25.35■■□□□ 1.65
FOXA1-205ENST00000557418 ARMT1Q9H993 441 aa25.35■■□□□ 1.65
FOXA1-205ENST00000557418 TMOD4Q9NZQ9 345 aa25.35■■□□□ 1.65
FOXA1-205ENST00000557418 USP17L10C9JJH3 530 aa25.34■■□□□ 1.65
FOXA1-205ENST00000557418 GH2P01242 217 aa25.34■■□□□ 1.65
FOXA1-205ENST00000557418 CTGFP29279 349 aa25.34■■□□□ 1.65
FOXA1-205ENST00000557418 MTMR2Q13614 643 aa25.34■■□□□ 1.65
FOXA1-205ENST00000557418 UBE3CQ15386 1083 aa25.34■■□□□ 1.65
FOXA1-205ENST00000557418 SHROOM1Q2M3G4 852 aaPredicted RBP25.34■■□□□ 1.65
FOXA1-205ENST00000557418 SLFNL1Q499Z3 407 aa25.34■■□□□ 1.65
FOXA1-205ENST00000557418 CERKLQ49MI3 558 aaPredicted RBP25.34■■□□□ 1.65
FOXA1-205ENST00000557418 SDR42E1Q8WUS8 393 aa25.34■■□□□ 1.65
FOXA1-205ENST00000557418 SRRDQ9UH36 339 aa25.34■■□□□ 1.65
FOXA1-205ENST00000557418 FCGRTP55899 365 aa25.33■■□□□ 1.65
FOXA1-205ENST00000557418 DCP1AQ9NPI6 582 aaPredicted RBP25.33■■□□□ 1.65
FOXA1-205ENST00000557418 ZSWIM8A7E2V4 1837 aa25.33■■□□□ 1.64
FOXA1-205ENST00000557418 MBD4O95243 580 aa25.32■■□□□ 1.64
FOXA1-205ENST00000557418 CABP5Q9NP86 173 aa25.32■■□□□ 1.64
FOXA1-205ENST00000557418 KIAA0100Q14667 2235 aaKnown RBP25.31■■□□□ 1.64
FOXA1-205ENST00000557418 ABCB5Q2M3G0 1257 aa25.31■■□□□ 1.64
FOXA1-205ENST00000557418 ANKRD13CQ8N6S4 541 aa25.31■■□□□ 1.64
FOXA1-205ENST00000557418 TMEM106CQ9BVX2 250 aa25.31■■□□□ 1.64
FOXA1-205ENST00000557418 ATP8A2Q9NTI2 1148 aa25.31■■□□□ 1.64
FOXA1-205ENST00000557418 MYH7P12883 1935 aa25.3■■□□□ 1.64
FOXA1-205ENST00000557418 PRKAB2O43741 272 aa25.3■■□□□ 1.64
FOXA1-205ENST00000557418 GCLCP48506 637 aaPredicted RBP25.3■■□□□ 1.64
FOXA1-205ENST00000557418 RAB3GAP1Q15042 981 aa25.3■■□□□ 1.64
FOXA1-205ENST00000557418 RAET1EQ8TD07 263 aa25.3■■□□□ 1.64
FOXA1-205ENST00000557418 ZNF333Q96JL9 665 aa25.3■■□□□ 1.64
FOXA1-205ENST00000557418 ASCC2Q9H1I8 757 aaPredicted RBP25.3■■□□□ 1.64
FOXA1-205ENST00000557418 CHGBP05060 677 aa25.29■■□□□ 1.64
FOXA1-205ENST00000557418 SHMT1P34896 483 aa25.29■■□□□ 1.64
FOXA1-205ENST00000557418 USP17L2Q6R6M4 530 aa25.29■■□□□ 1.64
FOXA1-205ENST00000557418 SH3TC2Q8TF17 1288 aa25.29■■□□□ 1.64
FOXA1-205ENST00000557418 DDRGK1Q96HY6 314 aa25.29■■□□□ 1.64
FOXA1-205ENST00000557418 MYPNQ86TC9 1320 aa25.29■■□□□ 1.64
FOXA1-205ENST00000557418 MGAMO43451 1857 aa25.28■■□□□ 1.64
FOXA1-205ENST00000557418 HOXA7P31268 230 aaPredicted RBP25.28■■□□□ 1.64
FOXA1-205ENST00000557418 IRX3P78415 501 aaPredicted RBP25.28■■□□□ 1.64
FOXA1-205ENST00000557418 GABPAQ06546 454 aa25.28■■□□□ 1.64
FOXA1-205ENST00000557418 BMP2KLQ5H9B9 411 aa25.28■■□□□ 1.64
FOXA1-205ENST00000557418 KBTBD3Q8NAB2 608 aa25.28■■□□□ 1.64
FOXA1-205ENST00000557418 EVI5LQ96CN4 794 aa25.28■■□□□ 1.64
FOXA1-205ENST00000557418 LOC285556D6RIA3 1793 aa25.28■■□□□ 1.64
FOXA1-205ENST00000557418 NAV1Q8NEY1 1877 aa25.28■■□□□ 1.64
FOXA1-205ENST00000557418 POTEFA5A3E0 1075 aa25.27■■□□□ 1.64
FOXA1-205ENST00000557418 CYP2D6P10635 497 aa25.27■■□□□ 1.64
FOXA1-205ENST00000557418 SDSP20132 328 aa25.27■■□□□ 1.64
FOXA1-205ENST00000557418 FAM110CQ1W6H9 321 aa25.27■■□□□ 1.64
FOXA1-205ENST00000557418 AMOTL1Q8IY63 956 aa25.27■■□□□ 1.64
FOXA1-205ENST00000557418 PUS7LQ9H0K6 701 aaKnown RBP25.27■■□□□ 1.64
FOXA1-205ENST00000557418 SLC4A4Q9Y6R1 1079 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms