RNA–Protein interactions for RNA: ENST00000557273.5

RDH11-209, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 562 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-209ENST00000557273 TRMT44Q8IYL2 757 aaKnown RBP12.43□□□□□ -0.42
RDH11-209ENST00000557273 GTF3C2Q8WUA4 911 aaPredicted RBP12.43□□□□□ -0.42
RDH11-209ENST00000557273 TRIB2Q92519 343 aa12.43□□□□□ -0.42
RDH11-209ENST00000557273 NOL10Q9BSC4 688 aaKnown RBP12.43□□□□□ -0.42
RDH11-209ENST00000557273 NBPF3Q9H094 633 aa12.43□□□□□ -0.42
RDH11-209ENST00000557273 TAOK2Q9UL54 1235 aa12.43□□□□□ -0.42
RDH11-209ENST00000557273 USP17L10C9JJH3 530 aa12.42□□□□□ -0.42
RDH11-209ENST00000557273 SOX1O00570 391 aaPredicted RBP12.42□□□□□ -0.42
RDH11-209ENST00000557273 HERVK_113P62684 666 aa12.42□□□□□ -0.42
RDH11-209ENST00000557273 POLA2Q14181 598 aa12.42□□□□□ -0.42
RDH11-209ENST00000557273 NAA16Q6N069 864 aaPredicted RBP12.42□□□□□ -0.42
RDH11-209ENST00000557273 NUDT12Q9BQG2 462 aa12.42□□□□□ -0.42
RDH11-209ENST00000557273 AATFQ9NY61 560 aaKnown RBP eCLIP12.42□□□□□ -0.42
RDH11-209ENST00000557273 TMOD4Q9NZQ9 345 aa12.42□□□□□ -0.42
RDH11-209ENST00000557273 STAP2Q9UGK3 403 aa12.42□□□□□ -0.42
RDH11-209ENST00000557273 MAPK4P31152 587 aa12.41□□□□□ -0.42
RDH11-209ENST00000557273 JAG1P78504 1218 aa12.41□□□□□ -0.42
RDH11-209ENST00000557273 TRIM32Q13049 653 aa12.41□□□□□ -0.42
RDH11-209ENST00000557273 TNNI3KQ59H18 835 aa12.41□□□□□ -0.42
RDH11-209ENST00000557273 CCDC158Q5M9N0 1113 aa12.41□□□□□ -0.42
RDH11-209ENST00000557273 TMED8Q6PL24 325 aaPredicted RBP12.41□□□□□ -0.42
RDH11-209ENST00000557273 ADGRA1Q86SQ6 560 aa12.41□□□□□ -0.42
RDH11-209ENST00000557273 GPRC5AQ8NFJ5 357 aa12.41□□□□□ -0.42
RDH11-209ENST00000557273 SSH3Q8TE77 659 aa12.41□□□□□ -0.42
RDH11-209ENST00000557273 USP6NLQ92738 828 aa12.41□□□□□ -0.42
RDH11-209ENST00000557273 C12orf42Q96LP6 360 aa12.41□□□□□ -0.42
RDH11-209ENST00000557273 P2RX7Q99572 595 aaKnown RBP12.41□□□□□ -0.42
RDH11-209ENST00000557273 TXNRD2Q9NNW7 524 aa12.41□□□□□ -0.42
RDH11-209ENST00000557273 RBPJLQ9UBG7 517 aa12.41□□□□□ -0.42
RDH11-209ENST00000557273 ZBTB21Q9ULJ3 1066 aa12.41□□□□□ -0.42
RDH11-209ENST00000557273 FPGT-TNNI3KV9GXZ4 949 aa12.41□□□□□ -0.42
RDH11-209ENST00000557273 COL6A3P12111 3177 aa12.41□□□□□ -0.42
RDH11-209ENST00000557273 CUL9Q8IWT3 2517 aa12.4□□□□□ -0.42
RDH11-209ENST00000557273 CCER2I3L3R5 266 aa12.4□□□□□ -0.42
RDH11-209ENST00000557273 CYP2E1P05181 493 aaPredicted RBP12.4□□□□□ -0.42
RDH11-209ENST00000557273 COL6A1P12109 1028 aa12.4□□□□□ -0.42
RDH11-209ENST00000557273 LRIT3Q3SXY7 679 aa12.4□□□□□ -0.42
RDH11-209ENST00000557273 TTC39AQ5SRH9 613 aa12.4□□□□□ -0.42
RDH11-209ENST00000557273 CERS3Q8IU89 383 aa12.4□□□□□ -0.42
RDH11-209ENST00000557273 MAPKAPK5Q8IW41 473 aa12.4□□□□□ -0.42
RDH11-209ENST00000557273 TGFBRAP1Q8WUH2 860 aa12.4□□□□□ -0.42
RDH11-209ENST00000557273 LRCH3Q96II8 777 aa12.4□□□□□ -0.42
RDH11-209ENST00000557273 DBNDD2Q9BQY9 259 aa12.4□□□□□ -0.42
RDH11-209ENST00000557273 C11orf49Q9H6J7 331 aa12.4□□□□□ -0.42
RDH11-209ENST00000557273 PFASO15067 1338 aa12.39□□□□□ -0.43
RDH11-209ENST00000557273 HLA-DOAP06340 250 aa12.39□□□□□ -0.43
RDH11-209ENST00000557273 PRKAR2AP13861 404 aaKnown RBP12.39□□□□□ -0.43
RDH11-209ENST00000557273 CYP2B6P20813 491 aa12.39□□□□□ -0.43
RDH11-209ENST00000557273 RGS2P41220 211 aa12.39□□□□□ -0.43
RDH11-209ENST00000557273 ERVK-9P63128 1117 aa12.39□□□□□ -0.43
RDH11-209ENST00000557273 ERVK-24P63145 666 aa12.39□□□□□ -0.43
RDH11-209ENST00000557273 PDE3AQ14432 1141 aa12.39□□□□□ -0.43
RDH11-209ENST00000557273 MORN1Q5T089 497 aa12.39□□□□□ -0.43
RDH11-209ENST00000557273 C7orf61Q8IZ16 206 aa12.39□□□□□ -0.43
RDH11-209ENST00000557273 CRACR2BQ8N4Y2 399 aaPredicted RBP12.39□□□□□ -0.43
RDH11-209ENST00000557273 APBA2Q99767 749 aa12.39□□□□□ -0.43
RDH11-209ENST00000557273 PALD1Q9ULE6 856 aa12.39□□□□□ -0.43
RDH11-209ENST00000557273 NOP58Q9Y2X3 529 aaKnown RBP12.39□□□□□ -0.43
RDH11-209ENST00000557273 ZKSCAN1P17029 563 aaPredicted RBP12.38□□□□□ -0.43
RDH11-209ENST00000557273 ATP8B2P98198 1209 aa12.38□□□□□ -0.43
RDH11-209ENST00000557273 Q3C1V9 767 aa12.38□□□□□ -0.43
RDH11-209ENST00000557273 TATDN1Q6P1N9 297 aa12.38□□□□□ -0.43
RDH11-209ENST00000557273 USP17L2Q6R6M4 530 aa12.38□□□□□ -0.43
RDH11-209ENST00000557273 POTEEQ6S8J3 1075 aa12.38□□□□□ -0.43
RDH11-209ENST00000557273 LBX2Q6XYB7 198 aa12.38□□□□□ -0.43
RDH11-209ENST00000557273 GPR142Q7Z601 462 aa12.38□□□□□ -0.43
RDH11-209ENST00000557273 TRIM34Q9BYJ4 488 aa12.38□□□□□ -0.43
RDH11-209ENST00000557273 EHD4Q9H223 541 aa12.38□□□□□ -0.43
RDH11-209ENST00000557273 SNRKQ9NRH2 765 aa12.38□□□□□ -0.43
RDH11-209ENST00000557273 EMILIN3Q9NT22 766 aa12.38□□□□□ -0.43
RDH11-209ENST00000557273 TNNQ9UQP3 1299 aa12.38□□□□□ -0.43
RDH11-209ENST00000557273 ZNF236Q9UL36 1845 aa12.37□□□□□ -0.43
RDH11-209ENST00000557273 BCAR3O75815 825 aa12.37□□□□□ -0.43
RDH11-209ENST00000557273 GDF11O95390 407 aa12.37□□□□□ -0.43
RDH11-209ENST00000557273 MAGEA10P43363 369 aaPredicted RBP12.37□□□□□ -0.43
RDH11-209ENST00000557273 ZAP70P43403 619 aa12.37□□□□□ -0.43
RDH11-209ENST00000557273 CACNB2Q08289 660 aaPredicted RBP12.37□□□□□ -0.43
RDH11-209ENST00000557273 SHROOM1Q2M3G4 852 aaPredicted RBP12.37□□□□□ -0.43
RDH11-209ENST00000557273 LHX8Q68G74 356 aa12.37□□□□□ -0.43
RDH11-209ENST00000557273 PLEKHH3Q7Z736 793 aa12.37□□□□□ -0.43
RDH11-209ENST00000557273 TDHQ8IZJ6 230 aa12.37□□□□□ -0.43
RDH11-209ENST00000557273 PORCNQ9H237 461 aa12.37□□□□□ -0.43
RDH11-209ENST00000557273 PIH1D3Q9NQM4 214 aaKnown RBP12.37□□□□□ -0.43
RDH11-209ENST00000557273 DBNLQ9UJU6 430 aaKnown RBP12.37□□□□□ -0.43
RDH11-209ENST00000557273 ZMYND8Q9ULU4 1186 aaPredicted RBP12.37□□□□□ -0.43
RDH11-209ENST00000557273 RABGAP1Q9Y3P9 1069 aa12.37□□□□□ -0.43
RDH11-209ENST00000557273 PEX10O60683 326 aa12.36□□□□□ -0.43
RDH11-209ENST00000557273 USP14P54578 494 aa12.36□□□□□ -0.43
RDH11-209ENST00000557273 MAP2K5Q13163 448 aa12.36□□□□□ -0.43
RDH11-209ENST00000557273 ZKSCAN2Q63HK3 967 aa12.36□□□□□ -0.43
RDH11-209ENST00000557273 TMEM57Q8N5G2 664 aa12.36□□□□□ -0.43
RDH11-209ENST00000557273 SLC17A8Q8NDX2 589 aa12.36□□□□□ -0.43
RDH11-209ENST00000557273 FRAT1Q92837 279 aaPredicted RBP12.36□□□□□ -0.43
RDH11-209ENST00000557273 CLUAP1Q96AJ1 413 aa12.36□□□□□ -0.43
RDH11-209ENST00000557273 SERPINB13Q9UIV8 391 aa12.36□□□□□ -0.43
RDH11-209ENST00000557273 NAV1Q8NEY1 1877 aa12.36□□□□□ -0.43
RDH11-209ENST00000557273 RLFQ13129 1914 aa12.35□□□□□ -0.43
RDH11-209ENST00000557273 A0A0G2JMZ2 1700 aa12.35□□□□□ -0.43
RDH11-209ENST00000557273 USP17L15C9J2P7 530 aa12.35□□□□□ -0.43
RDH11-209ENST00000557273 USP17L13C9JLJ4 530 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms