RNA–Protein interactions for RNA: ENST00000557193.1

NEMF-214, Transcript of nuclear export mediator factor, humanhuman

TSL 1 (best)

Gene NEMF, Length 737 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEMF-214ENST00000557193 A0A1W2PP64 1363 aa9.05□□□□□ -0.96
NEMF-214ENST00000557193 LINC01387J3KSC0 135 aa9.05□□□□□ -0.96
NEMF-214ENST00000557193 GNB5O14775 395 aa9.05□□□□□ -0.96
NEMF-214ENST00000557193 SCAMP3O14828 347 aaKnown RBP9.05□□□□□ -0.96
NEMF-214ENST00000557193 HOXB4P17483 251 aaPredicted RBP9.05□□□□□ -0.96
NEMF-214ENST00000557193 EPHA1P21709 976 aa9.05□□□□□ -0.96
NEMF-214ENST00000557193 CDC25BP30305 580 aa9.05□□□□□ -0.96
NEMF-214ENST00000557193 MAP4K3Q8IVH8 894 aa9.05□□□□□ -0.96
NEMF-214ENST00000557193 BEND7Q8N7W2 519 aaPredicted RBP9.05□□□□□ -0.96
NEMF-214ENST00000557193 WNT8BQ93098 351 aa9.05□□□□□ -0.96
NEMF-214ENST00000557193 PNNQ9H307 717 aaKnown RBP9.05□□□□□ -0.96
NEMF-214ENST00000557193 SRA1Q9HD15 236 aaKnown RBP9.05□□□□□ -0.96
NEMF-214ENST00000557193 XRN1Q8IZH2 1706 aaKnown RBP9.05□□□□□ -0.96
NEMF-214ENST00000557193 ADGRL3Q9HAR2 1447 aa9.05□□□□□ -0.96
NEMF-214ENST00000557193 LMTK3Q96Q04 1460 aa9.04□□□□□ -0.96
NEMF-214ENST00000557193 PIP4K2BP78356 416 aa9.04□□□□□ -0.96
NEMF-214ENST00000557193 PPP2R3AQ06190 1150 aa9.04□□□□□ -0.96
NEMF-214ENST00000557193 COL9A3Q14050 684 aaPredicted RBP9.04□□□□□ -0.96
NEMF-214ENST00000557193 MEI1Q5TIA1 1274 aa9.04□□□□□ -0.96
NEMF-214ENST00000557193 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.04□□□□□ -0.96
NEMF-214ENST00000557193 GPN3Q9UHW5 284 aaPredicted RBP9.04□□□□□ -0.96
NEMF-214ENST00000557193 TTC21AQ8NDW8 1320 aa9.04□□□□□ -0.96
NEMF-214ENST00000557193 ESRRAP11474 423 aaPredicted RBP9.03□□□□□ -0.96
NEMF-214ENST00000557193 LORP23490 312 aaPredicted RBP9.03□□□□□ -0.96
NEMF-214ENST00000557193 PPP2R1AP30153 589 aa9.03□□□□□ -0.96
NEMF-214ENST00000557193 SNRPNP63162 240 aaKnown RBP9.03□□□□□ -0.96
NEMF-214ENST00000557193 HNRNPUQ00839 825 aaKnown RBP eCLIP9.03□□□□□ -0.96
NEMF-214ENST00000557193 LINC00114Q6XXX2 140 aa9.03□□□□□ -0.96
NEMF-214ENST00000557193 SV2BQ7L1I2 683 aa9.03□□□□□ -0.96
NEMF-214ENST00000557193 DTWD1Q8N5C7 304 aa9.03□□□□□ -0.96
NEMF-214ENST00000557193 OSGEPQ9NPF4 335 aa9.03□□□□□ -0.96
NEMF-214ENST00000557193 SEC31BQ9NQW1 1179 aa9.03□□□□□ -0.96
NEMF-214ENST00000557193 METTL5Q9NRN9 209 aaKnown RBP9.03□□□□□ -0.96
NEMF-214ENST00000557193 TMEM39AQ9NV64 488 aa9.03□□□□□ -0.96
NEMF-214ENST00000557193 ADAMTS8Q9UP79 889 aa9.03□□□□□ -0.96
NEMF-214ENST00000557193 MYOM1P52179 1685 aa9.03□□□□□ -0.96
NEMF-214ENST00000557193 ACEP12821 1306 aa9.03□□□□□ -0.96
NEMF-214ENST00000557193 USP32Q8NFA0 1604 aa9.02□□□□□ -0.96
NEMF-214ENST00000557193 B3GALT4O96024 378 aa9.02□□□□□ -0.97
NEMF-214ENST00000557193 TNNT2P45379 298 aaPredicted RBP9.02□□□□□ -0.97
NEMF-214ENST00000557193 RAC1P63000 192 aa9.02□□□□□ -0.97
NEMF-214ENST00000557193 C19orf57Q0VDD7 668 aa9.02□□□□□ -0.97
NEMF-214ENST00000557193 CCDC85BQ15834 202 aaPredicted RBP9.02□□□□□ -0.97
NEMF-214ENST00000557193 ZNF423Q2M1K9 1284 aa9.02□□□□□ -0.97
NEMF-214ENST00000557193 LDLRAD1Q5T700 205 aa9.02□□□□□ -0.97
NEMF-214ENST00000557193 TXNDC11Q6PKC3 985 aa9.02□□□□□ -0.97
NEMF-214ENST00000557193 TPTE2Q6XPS3 522 aa9.02□□□□□ -0.97
NEMF-214ENST00000557193 SLC7A3Q8WY07 619 aa9.02□□□□□ -0.97
NEMF-214ENST00000557193 NOC4LQ9BVI4 516 aaKnown RBP9.02□□□□□ -0.97
NEMF-214ENST00000557193 PLVAPQ9BX97 442 aa9.02□□□□□ -0.97
NEMF-214ENST00000557193 SOX17Q9H6I2 414 aaPredicted RBP9.02□□□□□ -0.97
NEMF-214ENST00000557193 CHD2O14647 1828 aaKnown RBP9.02□□□□□ -0.97
NEMF-214ENST00000557193 NWD1Q149M9 1564 aa9.02□□□□□ -0.97
NEMF-214ENST00000557193 CDC42BPGQ6DT37 1551 aa9.02□□□□□ -0.97
NEMF-214ENST00000557193 ITSN1Q15811 1721 aa9.02□□□□□ -0.97
NEMF-214ENST00000557193 FAM181BA6NEQ2 426 aa9.01□□□□□ -0.97
NEMF-214ENST00000557193 SOX1O00570 391 aaPredicted RBP9.01□□□□□ -0.97
NEMF-214ENST00000557193 FSCN2O14926 492 aa9.01□□□□□ -0.97
NEMF-214ENST00000557193 RLBP1P12271 317 aa9.01□□□□□ -0.97
NEMF-214ENST00000557193 ZNF76P36508 570 aa9.01□□□□□ -0.97
NEMF-214ENST00000557193 DCCP43146 1447 aa9.01□□□□□ -0.97
NEMF-214ENST00000557193 KLHL23Q8NBE8 558 aa9.01□□□□□ -0.97
NEMF-214ENST00000557193 PMFBP1Q8TBY8 1022 aa9.01□□□□□ -0.97
NEMF-214ENST00000557193 RNF34Q969K3 372 aa9.01□□□□□ -0.97
NEMF-214ENST00000557193 NOP53Q9NZM5 478 aaKnown RBP9.01□□□□□ -0.97
NEMF-214ENST00000557193 SAMM50Q9Y512 469 aa9.01□□□□□ -0.97
NEMF-214ENST00000557193 TMEM94Q12767 1356 aa9□□□□□ -0.97
NEMF-214ENST00000557193 FBXO24O75426 580 aa9□□□□□ -0.97
NEMF-214ENST00000557193 TCF3P15923 654 aa9□□□□□ -0.97
NEMF-214ENST00000557193 FAAP100Q0VG06 881 aa9□□□□□ -0.97
NEMF-214ENST00000557193 TRIM28Q13263 835 aaKnown RBP9□□□□□ -0.97
NEMF-214ENST00000557193 ILDR2Q71H61 639 aa9□□□□□ -0.97
NEMF-214ENST00000557193 TRIM11Q96F44 468 aa9□□□□□ -0.97
NEMF-214ENST00000557193 SCARF2Q96GP6 870 aaPredicted RBP9□□□□□ -0.97
NEMF-214ENST00000557193 NECAB3Q96P71 396 aaPredicted RBP9□□□□□ -0.97
NEMF-214ENST00000557193 CPSF1Q10570 1443 aaKnown RBP8.99□□□□□ -0.97
NEMF-214ENST00000557193 A0A0A0MRY4 1105 aa8.99□□□□□ -0.97
NEMF-214ENST00000557193 FYB1O15117 783 aa8.99□□□□□ -0.97
NEMF-214ENST00000557193 PPM1GO15355 546 aaPredicted RBP8.99□□□□□ -0.97
NEMF-214ENST00000557193 ZNF157P51786 506 aaPredicted RBP8.99□□□□□ -0.97
NEMF-214ENST00000557193 GSTM4Q03013 218 aa8.99□□□□□ -0.97
NEMF-214ENST00000557193 HS2ST1Q7LGA3 356 aa8.99□□□□□ -0.97
NEMF-214ENST00000557193 NGEFQ8N5V2 710 aa8.99□□□□□ -0.97
NEMF-214ENST00000557193 CARD10Q9BWT7 1032 aa8.99□□□□□ -0.97
NEMF-214ENST00000557193 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.99□□□□□ -0.97
NEMF-214ENST00000557193 TTC21BQ7Z4L5 1316 aa8.99□□□□□ -0.97
NEMF-214ENST00000557193 USP6P35125 1406 aa8.98□□□□□ -0.97
NEMF-214ENST00000557193 FANCCQ00597 558 aa8.98□□□□□ -0.97
NEMF-214ENST00000557193 SUZ12Q15022 739 aaKnown RBP8.98□□□□□ -0.97
NEMF-214ENST00000557193 SETDB1Q15047 1291 aa8.98□□□□□ -0.97
NEMF-214ENST00000557193 PRRT3Q5FWE3 981 aa8.98□□□□□ -0.97
NEMF-214ENST00000557193 FBXO11Q86XK2 927 aa8.98□□□□□ -0.97
NEMF-214ENST00000557193 PNISRQ8TF01 805 aaKnown RBP8.98□□□□□ -0.97
NEMF-214ENST00000557193 CNTNAP5Q8WYK1 1306 aa8.98□□□□□ -0.97
NEMF-214ENST00000557193 PRR36Q9H6K5 1346 aa8.98□□□□□ -0.97
NEMF-214ENST00000557193 POLR3AO14802 1390 aaPredicted RBP8.98□□□□□ -0.97
NEMF-214ENST00000557193 INSRP06213 1382 aa8.98□□□□□ -0.97
NEMF-214ENST00000557193 CYP11A1P05108 521 aa8.97□□□□□ -0.97
NEMF-214ENST00000557193 MTHFSP49914 203 aa8.97□□□□□ -0.97
NEMF-214ENST00000557193 AP3B2Q13367 1082 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms