RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 ANAPC4Q9UJX5 808 aa13.35□□□□□ -0.27
NEK9-210ENST00000557026 ERCC5P28715 1186 aaPredicted RBP13.35□□□□□ -0.27
NEK9-210ENST00000557026 EIF4A1P60842 406 aaKnown RBP13.35□□□□□ -0.27
NEK9-210ENST00000557026 PLCB3Q01970 1234 aa13.35□□□□□ -0.27
NEK9-210ENST00000557026 UTP14CQ5TAP6 766 aaKnown RBP13.35□□□□□ -0.27
NEK9-210ENST00000557026 LGSNQ5TDP6 509 aa13.35□□□□□ -0.27
NEK9-210ENST00000557026 KIFC2Q96AC6 838 aa13.35□□□□□ -0.27
NEK9-210ENST00000557026 SMC6Q96SB8 1091 aa13.35□□□□□ -0.27
NEK9-210ENST00000557026 MLXIPQ9HAP2 919 aa13.35□□□□□ -0.27
NEK9-210ENST00000557026 LRWD1Q9UFC0 647 aa13.35□□□□□ -0.27
NEK9-210ENST00000557026 NSMFQ6X4W1 530 aa13.34□□□□□ -0.27
NEK9-210ENST00000557026 MAATS1Q7Z4T9 603 aa13.34□□□□□ -0.27
NEK9-210ENST00000557026 UNC5CLQ8IV45 518 aa13.34□□□□□ -0.27
NEK9-210ENST00000557026 TRIML1Q8N9V2 468 aa13.34□□□□□ -0.27
NEK9-210ENST00000557026 CLASP1Q7Z460 1538 aa13.34□□□□□ -0.27
NEK9-210ENST00000557026 PPP2R3AQ06190 1150 aa13.34□□□□□ -0.27
NEK9-210ENST00000557026 SYCE1Q8N0S2 351 aa13.34□□□□□ -0.27
NEK9-210ENST00000557026 DEPTORQ8TB45 409 aa13.34□□□□□ -0.27
NEK9-210ENST00000557026 CACYBPQ9HB71 228 aaKnown RBP13.34□□□□□ -0.27
NEK9-210ENST00000557026 A0A1B0GVL5 298 aa13.34□□□□□ -0.27
NEK9-210ENST00000557026 CTAGE9A4FU28 777 aa13.34□□□□□ -0.27
NEK9-210ENST00000557026 TRAF5O00463 557 aa13.34□□□□□ -0.27
NEK9-210ENST00000557026 GNG11P61952 73 aa13.34□□□□□ -0.27
NEK9-210ENST00000557026 ZKSCAN3Q9BRR0 538 aa13.34□□□□□ -0.27
NEK9-210ENST00000557026 LOC102724428A0A0B4J2F2 783 aa13.34□□□□□ -0.27
NEK9-210ENST00000557026 BIN1O00499 593 aa13.34□□□□□ -0.27
NEK9-210ENST00000557026 SIK1P57059 783 aa13.34□□□□□ -0.27
NEK9-210ENST00000557026 MAP7D1Q3KQU3 841 aa13.34□□□□□ -0.27
NEK9-210ENST00000557026 GSDMBQ8TAX9 411 aa13.34□□□□□ -0.27
NEK9-210ENST00000557026 CCT6BQ92526 530 aa13.34□□□□□ -0.27
NEK9-210ENST00000557026 MYO5CQ9NQX4 1742 aa13.34□□□□□ -0.27
NEK9-210ENST00000557026 TTC38Q5R3I4 469 aa13.33□□□□□ -0.27
NEK9-210ENST00000557026 SPOUT1Q5T280 376 aaKnown RBP13.33□□□□□ -0.27
NEK9-210ENST00000557026 PA2G4Q9UQ80 394 aaKnown RBP13.33□□□□□ -0.27
NEK9-210ENST00000557026 NFKBIAP25963 317 aa13.33□□□□□ -0.28
NEK9-210ENST00000557026 CLEC4GQ6UXB4 293 aa13.33□□□□□ -0.28
NEK9-210ENST00000557026 CCDC50Q8IVM0 306 aa13.33□□□□□ -0.28
NEK9-210ENST00000557026 JARID2Q92833 1246 aaPredicted RBP13.33□□□□□ -0.28
NEK9-210ENST00000557026 FAM184BQ9ULE4 1060 aa13.33□□□□□ -0.28
NEK9-210ENST00000557026 ACTN4O43707 911 aaKnown RBP13.33□□□□□ -0.28
NEK9-210ENST00000557026 PRPF6O94906 941 aaKnown RBP13.33□□□□□ -0.28
NEK9-210ENST00000557026 MYCLP12524 364 aaPredicted RBP13.33□□□□□ -0.28
NEK9-210ENST00000557026 FAM160A1Q05DH4 1040 aa13.33□□□□□ -0.28
NEK9-210ENST00000557026 AKNAD1Q5T1N1 836 aa13.33□□□□□ -0.28
NEK9-210ENST00000557026 PANK2Q9BZ23 570 aa13.33□□□□□ -0.28
NEK9-210ENST00000557026 PPEF1O14829 653 aaPredicted RBP13.33□□□□□ -0.28
NEK9-210ENST00000557026 NPR1P16066 1061 aa13.33□□□□□ -0.28
NEK9-210ENST00000557026 MYL5Q02045 173 aa13.33□□□□□ -0.28
NEK9-210ENST00000557026 CCDC129Q6ZRS4 1044 aa13.33□□□□□ -0.28
NEK9-210ENST00000557026 CCDC114Q96M63 670 aa13.33□□□□□ -0.28
NEK9-210ENST00000557026 LAD1O00515 517 aa13.32□□□□□ -0.28
NEK9-210ENST00000557026 GIPC1O14908 333 aa13.32□□□□□ -0.28
NEK9-210ENST00000557026 DAPK3O43293 454 aa13.32□□□□□ -0.28
NEK9-210ENST00000557026 TRMT1LQ7Z2T5 733 aaKnown RBP13.32□□□□□ -0.28
NEK9-210ENST00000557026 DDX23Q9BUQ8 820 aaKnown RBP13.32□□□□□ -0.28
NEK9-210ENST00000557026 SAMD9Q5K651 1589 aa13.32□□□□□ -0.28
NEK9-210ENST00000557026 PDE4DQ08499 809 aa13.32□□□□□ -0.28
NEK9-210ENST00000557026 CALCRLQ16602 461 aa13.32□□□□□ -0.28
NEK9-210ENST00000557026 MIER3Q7Z3K6 550 aa13.32□□□□□ -0.28
NEK9-210ENST00000557026 FAM114A2Q9NRY5 505 aa13.32□□□□□ -0.28
NEK9-210ENST00000557026 SAP30BPQ9UHR5 308 aaKnown RBP13.32□□□□□ -0.28
NEK9-210ENST00000557026 ATP8B3O60423 1300 aa13.32□□□□□ -0.28
NEK9-210ENST00000557026 TNNC2P02585 160 aa13.32□□□□□ -0.28
NEK9-210ENST00000557026 HOXD10P28358 340 aa13.32□□□□□ -0.28
NEK9-210ENST00000557026 UBXN1Q04323 297 aa13.32□□□□□ -0.28
NEK9-210ENST00000557026 POSTNQ15063 836 aa13.32□□□□□ -0.28
NEK9-210ENST00000557026 ASPRV1Q53RT3 343 aa13.32□□□□□ -0.28
NEK9-210ENST00000557026 ARHGEF16Q5VV41 709 aa13.32□□□□□ -0.28
NEK9-210ENST00000557026 C10orf67Q8IYJ2 551 aa13.32□□□□□ -0.28
NEK9-210ENST00000557026 GLG1Q92896 1179 aa13.32□□□□□ -0.28
NEK9-210ENST00000557026 MYOM2P54296 1465 aa13.32□□□□□ -0.28
NEK9-210ENST00000557026 GAS7O60861 476 aa13.32□□□□□ -0.28
NEK9-210ENST00000557026 UBE3CQ15386 1083 aa13.32□□□□□ -0.28
NEK9-210ENST00000557026 MUM1L1Q5H9M0 696 aa13.32□□□□□ -0.28
NEK9-210ENST00000557026 SND1Q7KZF4 910 aaKnown RBP eCLIP13.32□□□□□ -0.28
NEK9-210ENST00000557026 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.32□□□□□ -0.28
NEK9-210ENST00000557026 HAUS1Q96CS2 278 aa13.32□□□□□ -0.28
NEK9-210ENST00000557026 CFAP57Q96MR6 1250 aa13.32□□□□□ -0.28
NEK9-210ENST00000557026 NCAPD2Q15021 1401 aa13.31□□□□□ -0.28
NEK9-210ENST00000557026 CERKLQ49MI3 558 aaPredicted RBP13.31□□□□□ -0.28
NEK9-210ENST00000557026 DALRD3Q5D0E6 543 aaKnown RBP13.31□□□□□ -0.28
NEK9-210ENST00000557026 FAM160B2Q86V87 743 aa13.31□□□□□ -0.28
NEK9-210ENST00000557026 MKRN1Q9UHC7 482 aaKnown RBP13.31□□□□□ -0.28
NEK9-210ENST00000557026 UQCRHLA0A096LP55 91 aa13.31□□□□□ -0.28
NEK9-210ENST00000557026 UQCRHP07919 91 aa13.31□□□□□ -0.28
NEK9-210ENST00000557026 ARL1P40616 181 aaPredicted RBP13.31□□□□□ -0.28
NEK9-210ENST00000557026 SLC27A3Q5K4L6 730 aa13.31□□□□□ -0.28
NEK9-210ENST00000557026 RETREG2Q8NC44 543 aa13.31□□□□□ -0.28
NEK9-210ENST00000557026 ATP6V0A1Q93050 837 aa13.31□□□□□ -0.28
NEK9-210ENST00000557026 TEKT3Q9BXF9 490 aa13.31□□□□□ -0.28
NEK9-210ENST00000557026 ARMT1Q9H993 441 aa13.31□□□□□ -0.28
NEK9-210ENST00000557026 METTL14Q9HCE5 456 aaKnown RBP13.31□□□□□ -0.28
NEK9-210ENST00000557026 ADGBQ8N7X0 1667 aa13.31□□□□□ -0.28
NEK9-210ENST00000557026 GCFC2P16383 781 aaKnown RBP13.31□□□□□ -0.28
NEK9-210ENST00000557026 MARCKSP29966 332 aaPredicted RBP13.31□□□□□ -0.28
NEK9-210ENST00000557026 VAV2P52735 878 aa13.31□□□□□ -0.28
NEK9-210ENST00000557026 GTF2IP78347 998 aa13.31□□□□□ -0.28
NEK9-210ENST00000557026 ZNF496Q96IT1 587 aaPredicted RBP13.31□□□□□ -0.28
NEK9-210ENST00000557026 SARNPP82979 210 aaKnown RBP13.31□□□□□ -0.28
NEK9-210ENST00000557026 SNX29Q8TEQ0 813 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms