RNA–Protein interactions for RNA: ENST00000556886.1

LINC00871-204, long intergenic non-protein coding RNA 871, humanhuman

TSL 3 BASIC

Gene LINC00871, Length 866 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-204ENST00000556886 SHISA5Q8N114 240 aa9.65□□□□□ -0.86
LINC00871-204ENST00000556886 MAP3K1Q13233 1512 aa9.65□□□□□ -0.86
LINC00871-204ENST00000556886 URB2Q14146 1524 aaKnown RBP9.65□□□□□ -0.86
LINC00871-204ENST00000556886 ADMP35318 185 aa9.64□□□□□ -0.87
LINC00871-204ENST00000556886 REC114Q7Z4M0 266 aa9.64□□□□□ -0.87
LINC00871-204ENST00000556886 GATA6Q92908 595 aa9.64□□□□□ -0.87
LINC00871-204ENST00000556886 EAF1Q96JC9 268 aaPredicted RBP9.64□□□□□ -0.87
LINC00871-204ENST00000556886 DBNDD2Q9BQY9 259 aa9.64□□□□□ -0.87
LINC00871-204ENST00000556886 LRRC3Q9BY71 257 aa9.64□□□□□ -0.87
LINC00871-204ENST00000556886 FBRSQ9HAH7 460 aa9.64□□□□□ -0.87
LINC00871-204ENST00000556886 CORINQ9Y5Q5 1042 aa9.64□□□□□ -0.87
LINC00871-204ENST00000556886 TACC3Q9Y6A5 838 aa9.64□□□□□ -0.87
LINC00871-204ENST00000556886 GSC2O15499 205 aa9.63□□□□□ -0.87
LINC00871-204ENST00000556886 RAD51AP2Q09MP3 1159 aa9.63□□□□□ -0.87
LINC00871-204ENST00000556886 CDK5R2Q13319 367 aa9.63□□□□□ -0.87
LINC00871-204ENST00000556886 CDC37L1Q7L3B6 337 aa9.63□□□□□ -0.87
LINC00871-204ENST00000556886 ZNF654Q8IZM8 581 aa9.63□□□□□ -0.87
LINC00871-204ENST00000556886 FBXL6Q8N531 539 aa9.63□□□□□ -0.87
LINC00871-204ENST00000556886 ZNF507Q8TCN5 953 aa9.63□□□□□ -0.87
LINC00871-204ENST00000556886 TBC1D32Q96NH3 1257 aa9.63□□□□□ -0.87
LINC00871-204ENST00000556886 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.63□□□□□ -0.87
LINC00871-204ENST00000556886 POLR3KQ9Y2Y1 108 aaPredicted RBP9.63□□□□□ -0.87
LINC00871-204ENST00000556886 ARHGAP35Q9NRY4 1499 aa9.63□□□□□ -0.87
LINC00871-204ENST00000556886 WDR97A6NE52 1622 aa9.63□□□□□ -0.87
LINC00871-204ENST00000556886 ROBO2Q9HCK4 1378 aa9.63□□□□□ -0.87
LINC00871-204ENST00000556886 GRIN3BO60391 1043 aa9.62□□□□□ -0.87
LINC00871-204ENST00000556886 APOBRQ0VD83 1088 aa9.62□□□□□ -0.87
LINC00871-204ENST00000556886 NKG7Q16617 165 aa9.62□□□□□ -0.87
LINC00871-204ENST00000556886 ZAR1Q86SH2 424 aa9.62□□□□□ -0.87
LINC00871-204ENST00000556886 NT5C1AQ9BXI3 368 aa9.62□□□□□ -0.87
LINC00871-204ENST00000556886 IGSF5Q9NSI5 407 aa9.62□□□□□ -0.87
LINC00871-204ENST00000556886 WDR62O43379 1518 aa9.61□□□□□ -0.87
LINC00871-204ENST00000556886 RAD54L2Q9Y4B4 1467 aa9.61□□□□□ -0.87
LINC00871-204ENST00000556886 F13BP05160 661 aa9.61□□□□□ -0.87
LINC00871-204ENST00000556886 PGRP06401 933 aa9.61□□□□□ -0.87
LINC00871-204ENST00000556886 CWF19L2Q2TBE0 894 aaKnown RBP9.61□□□□□ -0.87
LINC00871-204ENST00000556886 KCT2Q8NC54 265 aa9.61□□□□□ -0.87
LINC00871-204ENST00000556886 SHKBP1Q8TBC3 707 aa9.61□□□□□ -0.87
LINC00871-204ENST00000556886 PSMG3-AS1Q96PY0 264 aa9.61□□□□□ -0.87
LINC00871-204ENST00000556886 BRMS1Q9HCU9 246 aa9.61□□□□□ -0.87
LINC00871-204ENST00000556886 FHAD1B1AJZ9 1412 aa9.6□□□□□ -0.87
LINC00871-204ENST00000556886 ERCC5P28715 1186 aaPredicted RBP9.6□□□□□ -0.87
LINC00871-204ENST00000556886 PDE4BQ07343 736 aa9.6□□□□□ -0.87
LINC00871-204ENST00000556886 SLBPQ14493 270 aaKnown RBP eCLIP9.6□□□□□ -0.87
LINC00871-204ENST00000556886 SEZ6Q53EL9 994 aa9.6□□□□□ -0.87
LINC00871-204ENST00000556886 HID1Q8IV36 788 aa9.6□□□□□ -0.87
LINC00871-204ENST00000556886 TGIF2Q9GZN2 237 aa9.6□□□□□ -0.87
LINC00871-204ENST00000556886 EFCAB5A4FU69 1503 aa9.6□□□□□ -0.87
LINC00871-204ENST00000556886 FAM170BA6NMN3 283 aa9.59□□□□□ -0.87
LINC00871-204ENST00000556886 WDR64B1ANS9 1081 aa9.59□□□□□ -0.87
LINC00871-204ENST00000556886 PLCG1P19174 1290 aa9.59□□□□□ -0.87
LINC00871-204ENST00000556886 PAK2Q13177 524 aa9.59□□□□□ -0.87
LINC00871-204ENST00000556886 SLC51AQ86UW1 340 aa9.59□□□□□ -0.87
LINC00871-204ENST00000556886 ZDHHC13Q8IUH4 622 aa9.59□□□□□ -0.87
LINC00871-204ENST00000556886 ACSF2Q96CM8 615 aaPredicted RBP9.59□□□□□ -0.87
LINC00871-204ENST00000556886 ACBD3Q9H3P7 528 aa9.59□□□□□ -0.87
LINC00871-204ENST00000556886 TJP2Q9UDY2 1190 aa9.59□□□□□ -0.87
LINC00871-204ENST00000556886 ABCA5Q8WWZ7 1642 aa9.59□□□□□ -0.87
LINC00871-204ENST00000556886 PRR36Q9H6K5 1346 aa9.58□□□□□ -0.88
LINC00871-204ENST00000556886 HTR3BO95264 441 aa9.58□□□□□ -0.88
LINC00871-204ENST00000556886 ARMCX6Q7L4S7 300 aa9.58□□□□□ -0.88
LINC00871-204ENST00000556886 NKD1Q969G9 470 aa9.58□□□□□ -0.88
LINC00871-204ENST00000556886 REV1Q9UBZ9 1251 aa9.58□□□□□ -0.88
LINC00871-204ENST00000556886 LEFTY1O75610 366 aa9.57□□□□□ -0.88
LINC00871-204ENST00000556886 FAM87AP0C7U9 286 aa9.57□□□□□ -0.88
LINC00871-204ENST00000556886 ZNF765Q7L2R6 523 aa9.57□□□□□ -0.88
LINC00871-204ENST00000556886 SLITRK4Q8IW52 837 aa9.57□□□□□ -0.88
LINC00871-204ENST00000556886 TOP6BLQ8N6T0 577 aa9.57□□□□□ -0.88
LINC00871-204ENST00000556886 DPH2Q9BQC3 489 aaPredicted RBP9.57□□□□□ -0.88
LINC00871-204ENST00000556886 CCSER2Q9H7U1 834 aa9.57□□□□□ -0.88
LINC00871-204ENST00000556886 ADAM30Q9UKF2 790 aa9.57□□□□□ -0.88
LINC00871-204ENST00000556886 PCDHB14Q9Y5E9 798 aa9.57□□□□□ -0.88
LINC00871-204ENST00000556886 GAPVD1Q14C86 1478 aa9.57□□□□□ -0.88
LINC00871-204ENST00000556886 AQRO60306 1485 aaKnown RBP eCLIP9.56□□□□□ -0.88
LINC00871-204ENST00000556886 LRIG2O94898 1065 aa9.56□□□□□ -0.88
LINC00871-204ENST00000556886 CAP2P40123 477 aa9.56□□□□□ -0.88
LINC00871-204ENST00000556886 PRAMEF13Q5VWM6 474 aa9.56□□□□□ -0.88
LINC00871-204ENST00000556886 MRPL41Q8IXM3 137 aaKnown RBP9.56□□□□□ -0.88
LINC00871-204ENST00000556886 TMEM87BQ96K49 555 aa9.56□□□□□ -0.88
LINC00871-204ENST00000556886 DUSP23Q9BVJ7 150 aa9.56□□□□□ -0.88
LINC00871-204ENST00000556886 FOXQ1Q9C009 403 aa9.56□□□□□ -0.88
LINC00871-204ENST00000556886 RRBP1Q9P2E9 1410 aaKnown RBP9.56□□□□□ -0.88
LINC00871-204ENST00000556886 TGFB1P01137 390 aa9.55□□□□□ -0.88
LINC00871-204ENST00000556886 MCM4P33991 863 aa9.55□□□□□ -0.88
LINC00871-204ENST00000556886 TNNI2P48788 182 aa9.55□□□□□ -0.88
LINC00871-204ENST00000556886 TMEM201Q5SNT2 666 aa9.55□□□□□ -0.88
LINC00871-204ENST00000556886 OGFOD3Q6PK18 319 aa9.55□□□□□ -0.88
LINC00871-204ENST00000556886 GK5Q6ZS86 529 aa9.55□□□□□ -0.88
LINC00871-204ENST00000556886 MCATQ8IVS2 390 aaKnown RBP9.55□□□□□ -0.88
LINC00871-204ENST00000556886 GIMAP7Q8NHV1 300 aa9.55□□□□□ -0.88
LINC00871-204ENST00000556886 OSBPL1AQ9BXW6 950 aa9.55□□□□□ -0.88
LINC00871-204ENST00000556886 PRDM10Q9NQV6 1147 aa9.55□□□□□ -0.88
LINC00871-204ENST00000556886 ATG3Q9NT62 314 aa9.55□□□□□ -0.88
LINC00871-204ENST00000556886 TARBP1Q13395 1621 aaKnown RBP9.54□□□□□ -0.88
LINC00871-204ENST00000556886 PRR19A6NJB7 356 aa9.54□□□□□ -0.88
LINC00871-204ENST00000556886 CST3P01034 146 aaPredicted RBP9.54□□□□□ -0.88
LINC00871-204ENST00000556886 CLCQ05315 142 aa9.54□□□□□ -0.88
LINC00871-204ENST00000556886 SLC6A19Q695T7 634 aa9.54□□□□□ -0.88
LINC00871-204ENST00000556886 XAGE3Q8WTP9 111 aa9.54□□□□□ -0.88
LINC00871-204ENST00000556886 GPRASP2Q96D09 838 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms