RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 GDF11O95390 407 aa27.45■■□□□ 1.98
TDP1-216ENST00000556867 CYP2D6P10635 497 aa27.45■■□□□ 1.98
TDP1-216ENST00000556867 EVX2Q03828 476 aa27.45■■□□□ 1.98
TDP1-216ENST00000556867 TAF1CQ15572 869 aaPredicted RBP27.45■■□□□ 1.98
TDP1-216ENST00000556867 ZNF296Q8WUU4 475 aaPredicted RBP27.45■■□□□ 1.98
TDP1-216ENST00000556867 MYH8P13535 1937 aa27.44■■□□□ 1.98
TDP1-216ENST00000556867 TRIM75PA6NK02 468 aa27.44■■□□□ 1.98
TDP1-216ENST00000556867 GNAT2P19087 354 aa27.44■■□□□ 1.98
TDP1-216ENST00000556867 SHMT1P34896 483 aa27.44■■□□□ 1.98
TDP1-216ENST00000556867 SHROOM1Q2M3G4 852 aaPredicted RBP27.44■■□□□ 1.98
TDP1-216ENST00000556867 GIMAP6Q6P9H5 292 aa27.44■■□□□ 1.98
TDP1-216ENST00000556867 FASTKD5Q7L8L6 764 aaKnown RBP27.44■■□□□ 1.98
TDP1-216ENST00000556867 ZNF280CQ8ND82 737 aa27.44■■□□□ 1.98
TDP1-216ENST00000556867 AS3MTQ9HBK9 375 aa27.44■■□□□ 1.98
TDP1-216ENST00000556867 LOC285556D6RIA3 1793 aa27.44■■□□□ 1.98
TDP1-216ENST00000556867 GSG1L2A8MUP6 293 aa27.43■■□□□ 1.98
TDP1-216ENST00000556867 USP17L12C9JPN9 530 aa27.43■■□□□ 1.98
TDP1-216ENST00000556867 USP17L21D6R901 530 aa27.43■■□□□ 1.98
TDP1-216ENST00000556867 C12orf60Q5U649 245 aa27.43■■□□□ 1.98
TDP1-216ENST00000556867 AMOTL1Q8IY63 956 aa27.43■■□□□ 1.98
TDP1-216ENST00000556867 WDR18Q9BV38 432 aa27.43■■□□□ 1.98
TDP1-216ENST00000556867 ZFYVE28Q9HCC9 887 aa27.43■■□□□ 1.98
TDP1-216ENST00000556867 SPP2Q13103 211 aa27.42■■□□□ 1.98
TDP1-216ENST00000556867 CERKLQ49MI3 558 aaPredicted RBP27.42■■□□□ 1.98
TDP1-216ENST00000556867 GPAT2Q6NUI2 795 aa27.42■■□□□ 1.98
TDP1-216ENST00000556867 SEC62Q99442 399 aaKnown RBP27.42■■□□□ 1.98
TDP1-216ENST00000556867 ARPP21Q9UBL0 812 aaPredicted RBP27.42■■□□□ 1.98
TDP1-216ENST00000556867 SWAP70Q9UH65 585 aa27.42■■□□□ 1.98
TDP1-216ENST00000556867 FKTNO75072 461 aa27.41■■□□□ 1.98
TDP1-216ENST00000556867 GH2P01242 217 aa27.41■■□□□ 1.98
TDP1-216ENST00000556867 PDE4AP27815 886 aa27.41■■□□□ 1.98
TDP1-216ENST00000556867 CTR9Q6PD62 1173 aa27.41■■□□□ 1.98
TDP1-216ENST00000556867 CYP2D7A0A087X1C5 515 aa27.4■■□□□ 1.98
TDP1-216ENST00000556867 TRIM6-TRIM34B2RNG4 842 aa27.4■■□□□ 1.98
TDP1-216ENST00000556867 PDHXO00330 501 aa27.4■■□□□ 1.98
TDP1-216ENST00000556867 SBK1Q52WX2 424 aa27.4■■□□□ 1.98
TDP1-216ENST00000556867 IFFO2Q5TF58 517 aa27.4■■□□□ 1.98
TDP1-216ENST00000556867 GADL1Q6ZQY3 521 aa27.4■■□□□ 1.98
TDP1-216ENST00000556867 EPB41L4AQ9HCS5 686 aaPredicted RBP27.4■■□□□ 1.98
TDP1-216ENST00000556867 ABCB5Q2M3G0 1257 aa27.39■■□□□ 1.98
TDP1-216ENST00000556867 SLC44A5Q8NCS7 719 aa27.39■■□□□ 1.98
TDP1-216ENST00000556867 DYNLL2Q96FJ2 89 aa27.39■■□□□ 1.98
TDP1-216ENST00000556867 SLC45A1Q9Y2W3 748 aa27.39■■□□□ 1.98
TDP1-216ENST00000556867 TLR2O60603 784 aa27.38■■□□□ 1.97
TDP1-216ENST00000556867 SH3D19Q5HYK7 790 aa27.38■■□□□ 1.97
TDP1-216ENST00000556867 C16orf86Q6ZW13 317 aa27.38■■□□□ 1.97
TDP1-216ENST00000556867 PROCA1Q8NCQ7 364 aaPredicted RBP27.38■■□□□ 1.97
TDP1-216ENST00000556867 RILPL2Q969X0 211 aa27.38■■□□□ 1.97
TDP1-216ENST00000556867 HELLSQ9NRZ9 838 aa27.38■■□□□ 1.97
TDP1-216ENST00000556867 PATL2C9JE40 543 aaKnown RBP27.37■■□□□ 1.97
TDP1-216ENST00000556867 SMIM22K7EJ46 135 aa27.37■■□□□ 1.97
TDP1-216ENST00000556867 CTU1Q7Z7A3 348 aaKnown RBP27.37■■□□□ 1.97
TDP1-216ENST00000556867 CABP5Q9NP86 173 aa27.37■■□□□ 1.97
TDP1-216ENST00000556867 AGTPBP1Q9UPW5 1226 aa27.37■■□□□ 1.97
TDP1-216ENST00000556867 ROBO3Q96MS0 1386 aa27.36■■□□□ 1.97
TDP1-216ENST00000556867 HMGCS2P54868 508 aa27.36■■□□□ 1.97
TDP1-216ENST00000556867 BACE1P56817 501 aa27.36■■□□□ 1.97
TDP1-216ENST00000556867 MTMR2Q13614 643 aa27.36■■□□□ 1.97
TDP1-216ENST00000556867 PARK7Q99497 189 aaKnown RBP27.36■■□□□ 1.97
TDP1-216ENST00000556867 ADGRA2Q96PE1 1338 aa27.36■■□□□ 1.97
TDP1-216ENST00000556867 APPP05067 770 aa27.35■■□□□ 1.97
TDP1-216ENST00000556867 TDO2P48775 406 aa27.35■■□□□ 1.97
TDP1-216ENST00000556867 CDK8P49336 464 aa27.35■■□□□ 1.97
TDP1-216ENST00000556867 SP3Q02447 781 aa27.35■■□□□ 1.97
TDP1-216ENST00000556867 DGKZQ13574 1117 aa27.35■■□□□ 1.97
TDP1-216ENST00000556867 CCDC129Q6ZRS4 1044 aa27.35■■□□□ 1.97
TDP1-216ENST00000556867 IFNL3Q8IZI9 196 aa27.35■■□□□ 1.97
TDP1-216ENST00000556867 FAM227BQ96M60 508 aa27.35■■□□□ 1.97
TDP1-216ENST00000556867 NACAP1Q9BZK3 213 aa27.35■■□□□ 1.97
TDP1-216ENST00000556867 A0A0D9SFI3 127 aa27.34■■□□□ 1.97
TDP1-216ENST00000556867 C19orf81C9J6K1 198 aa27.34■■□□□ 1.97
TDP1-216ENST00000556867 USP17L10C9JJH3 530 aa27.34■■□□□ 1.97
TDP1-216ENST00000556867 GUCY1A2P33402 732 aa27.34■■□□□ 1.97
TDP1-216ENST00000556867 RAB3GAP1Q15042 981 aa27.34■■□□□ 1.97
TDP1-216ENST00000556867 ERO1AQ96HE7 468 aa27.34■■□□□ 1.97
TDP1-216ENST00000556867 MCOLN1Q9GZU1 580 aa27.34■■□□□ 1.97
TDP1-216ENST00000556867 MCMDC2Q4G0Z9 681 aa27.33■■□□□ 1.97
TDP1-216ENST00000556867 TREML2Q5T2D2 321 aa27.33■■□□□ 1.97
TDP1-216ENST00000556867 CCDC17Q96LX7 622 aa27.33■■□□□ 1.97
TDP1-216ENST00000556867 FOXP2O15409 715 aa27.32■■□□□ 1.96
TDP1-216ENST00000556867 SDSP20132 328 aa27.32■■□□□ 1.96
TDP1-216ENST00000556867 NMIQ13287 307 aaPredicted RBP27.32■■□□□ 1.96
TDP1-216ENST00000556867 SEPT2Q15019 361 aa27.32■■□□□ 1.96
TDP1-216ENST00000556867 TTC22Q5TAA0 569 aa27.32■■□□□ 1.96
TDP1-216ENST00000556867 C17orf99Q6UX52 265 aa27.32■■□□□ 1.96
TDP1-216ENST00000556867 TMEM179Q6ZVK1 233 aa27.32■■□□□ 1.96
TDP1-216ENST00000556867 TMOD4Q9NZQ9 345 aa27.32■■□□□ 1.96
TDP1-216ENST00000556867 MINDY4BA8MYZ0 360 aa27.31■■□□□ 1.96
TDP1-216ENST00000556867 MPHOSPH10O00566 681 aaKnown RBP27.31■■□□□ 1.96
TDP1-216ENST00000556867 CYP2C8P10632 490 aa27.31■■□□□ 1.96
TDP1-216ENST00000556867 NAPBQ9H115 298 aa27.31■■□□□ 1.96
TDP1-216ENST00000556867 AKR1B1P15121 316 aa27.3■■□□□ 1.96
TDP1-216ENST00000556867 PABPC4Q13310 644 aaKnown RBP eCLIP27.3■■□□□ 1.96
TDP1-216ENST00000556867 CENPQQ7L2Z9 268 aaPredicted RBP27.3■■□□□ 1.96
TDP1-216ENST00000556867 CD99L2Q8TCZ2 262 aa27.3■■□□□ 1.96
TDP1-216ENST00000556867 FEZ1Q99689 392 aa27.3■■□□□ 1.96
TDP1-216ENST00000556867 KIAA1683Q9H0B3 1180 aa27.3■■□□□ 1.96
TDP1-216ENST00000556867 PNMA3Q9UL41 463 aa27.3■■□□□ 1.96
TDP1-216ENST00000556867 GREB1LQ9C091 1923 aaPredicted RBP27.29■■□□□ 1.96
TDP1-216ENST00000556867 GSPT1P15170 499 aaKnown RBP27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms