RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 MAP3K11Q16584 847 aa8.46□□□□□ -1.06
HIF1A-209ENST00000556827 ASIC4Q96FT7 647 aa8.46□□□□□ -1.06
HIF1A-209ENST00000556827 PLAGL2Q9UPG8 496 aa8.46□□□□□ -1.06
HIF1A-209ENST00000556827 URB2Q14146 1524 aaKnown RBP8.45□□□□□ -1.06
HIF1A-209ENST00000556827 LRIG2O94898 1065 aa8.45□□□□□ -1.06
HIF1A-209ENST00000556827 ITGB5P18084 799 aa8.45□□□□□ -1.06
HIF1A-209ENST00000556827 FUT4P22083 530 aa8.45□□□□□ -1.06
HIF1A-209ENST00000556827 SEPT6Q14141 434 aa8.45□□□□□ -1.06
HIF1A-209ENST00000556827 MRPL58Q14197 206 aaKnown RBP8.45□□□□□ -1.06
HIF1A-209ENST00000556827 ANGEL2Q5VTE6 544 aaKnown RBP8.45□□□□□ -1.06
HIF1A-209ENST00000556827 CYFIP1Q7L576 1253 aa8.45□□□□□ -1.06
HIF1A-209ENST00000556827 PRDM5Q9NQX1 630 aaPredicted RBP8.45□□□□□ -1.06
HIF1A-209ENST00000556827 IGF2BP3O00425 579 aaKnown RBP eCLIP8.44□□□□□ -1.06
HIF1A-209ENST00000556827 RPS26P62854 115 aaKnown RBP8.44□□□□□ -1.06
HIF1A-209ENST00000556827 PI4K2BQ8TCG2 481 aa8.44□□□□□ -1.06
HIF1A-209ENST00000556827 WNT10AQ9GZT5 417 aa8.44□□□□□ -1.06
HIF1A-209ENST00000556827 FBRSQ9HAH7 460 aa8.44□□□□□ -1.06
HIF1A-209ENST00000556827 RC3H2Q9HBD1 1191 aaKnown RBP8.44□□□□□ -1.06
HIF1A-209ENST00000556827 SNCAIPQ9Y6H5 919 aa8.44□□□□□ -1.06
HIF1A-209ENST00000556827 IFT140Q96RY7 1462 aa8.44□□□□□ -1.06
HIF1A-209ENST00000556827 BIN1O00499 593 aa8.43□□□□□ -1.06
HIF1A-209ENST00000556827 CDK8P49336 464 aa8.43□□□□□ -1.06
HIF1A-209ENST00000556827 MIPEPQ99797 713 aa8.43□□□□□ -1.06
HIF1A-209ENST00000556827 FOXQ1Q9C009 403 aa8.43□□□□□ -1.06
HIF1A-209ENST00000556827 TNKS2Q9H2K2 1166 aa8.43□□□□□ -1.06
HIF1A-209ENST00000556827 TPX2Q9ULW0 747 aaKnown RBP8.43□□□□□ -1.06
HIF1A-209ENST00000556827 SNX11Q9Y5W9 270 aa8.43□□□□□ -1.06
HIF1A-209ENST00000556827 EOMESO95936 686 aa8.42□□□□□ -1.06
HIF1A-209ENST00000556827 RBM25P49756 843 aaKnown RBP8.42□□□□□ -1.06
HIF1A-209ENST00000556827 LIG3P49916 1009 aa8.42□□□□□ -1.06
HIF1A-209ENST00000556827 IKZF1Q13422 519 aa8.42□□□□□ -1.06
HIF1A-209ENST00000556827 LDLRAD1Q5T700 205 aa8.42□□□□□ -1.06
HIF1A-209ENST00000556827 FAM214BQ7L5A3 538 aa8.42□□□□□ -1.06
HIF1A-209ENST00000556827 SPACA3Q8IXA5 215 aa8.42□□□□□ -1.06
HIF1A-209ENST00000556827 MRRFQ96E11 262 aaKnown RBP8.42□□□□□ -1.06
HIF1A-209ENST00000556827 KIAA1522Q9P206 1035 aaPredicted RBP8.42□□□□□ -1.06
HIF1A-209ENST00000556827 MAPK8IP1Q9UQF2 711 aa8.42□□□□□ -1.06
HIF1A-209ENST00000556827 PCDHB5Q9Y5E4 795 aa8.42□□□□□ -1.06
HIF1A-209ENST00000556827 ABCC8Q09428 1581 aa8.42□□□□□ -1.06
HIF1A-209ENST00000556827 GRK4P32298 578 aa8.41□□□□□ -1.06
HIF1A-209ENST00000556827 SLBPQ14493 270 aaKnown RBP eCLIP8.41□□□□□ -1.06
HIF1A-209ENST00000556827 NKG7Q16617 165 aa8.41□□□□□ -1.06
HIF1A-209ENST00000556827 LCE3BQ5TA77 95 aa8.41□□□□□ -1.06
HIF1A-209ENST00000556827 AGMOQ6ZNB7 445 aa8.41□□□□□ -1.06
HIF1A-209ENST00000556827 HID1Q8IV36 788 aa8.41□□□□□ -1.06
HIF1A-209ENST00000556827 ASB11Q8WXH4 323 aa8.41□□□□□ -1.06
HIF1A-209ENST00000556827 CRELD1Q96HD1 420 aa8.41□□□□□ -1.06
HIF1A-209ENST00000556827 MIR1-1HGQ9H1L0 117 aa8.41□□□□□ -1.06
HIF1A-209ENST00000556827 MBNL3Q9NUK0 354 aaKnown RBP8.41□□□□□ -1.06
HIF1A-209ENST00000556827 ADAMTS6Q9UKP5 1117 aa8.41□□□□□ -1.06
HIF1A-209ENST00000556827 CCDC88BA6NC98 1476 aa8.4□□□□□ -1.06
HIF1A-209ENST00000556827 FAM155AB1AL88 458 aaPredicted RBP8.4□□□□□ -1.06
HIF1A-209ENST00000556827 SLITRK5O94991 958 aa8.4□□□□□ -1.06
HIF1A-209ENST00000556827 PAPLNO95428 1278 aa8.4□□□□□ -1.06
HIF1A-209ENST00000556827 RNASE1P07998 156 aaKnown RBP8.4□□□□□ -1.06
HIF1A-209ENST00000556827 CLCN7P51798 805 aa8.4□□□□□ -1.06
HIF1A-209ENST00000556827 TAF1CQ15572 869 aaPredicted RBP8.4□□□□□ -1.06
HIF1A-209ENST00000556827 TSNAXIP1Q2TAA8 658 aa8.4□□□□□ -1.06
HIF1A-209ENST00000556827 CYB5RLQ6IPT4 315 aa8.4□□□□□ -1.06
HIF1A-209ENST00000556827 KRTAP19-1Q8IUB9 90 aa8.4□□□□□ -1.06
HIF1A-209ENST00000556827 BACH2Q9BYV9 841 aa8.4□□□□□ -1.06
HIF1A-209ENST00000556827 USP31Q70CQ4 1352 aa8.39□□□□□ -1.07
HIF1A-209ENST00000556827 RLBP1P12271 317 aa8.39□□□□□ -1.07
HIF1A-209ENST00000556827 NKPD1Q17RQ9 610 aa8.39□□□□□ -1.07
HIF1A-209ENST00000556827 PRAMEF13Q5VWM6 474 aa8.39□□□□□ -1.07
HIF1A-209ENST00000556827 DIEXFQ68CQ4 756 aaKnown RBP8.39□□□□□ -1.07
HIF1A-209ENST00000556827 KRTAP1-3Q8IUG1 177 aa8.39□□□□□ -1.07
HIF1A-209ENST00000556827 MFSD2AQ8NA29 543 aa8.39□□□□□ -1.07
HIF1A-209ENST00000556827 XAGE3Q8WTP9 111 aa8.39□□□□□ -1.07
HIF1A-209ENST00000556827 F6X3S4 739 aa8.38□□□□□ -1.07
HIF1A-209ENST00000556827 CAP2P40123 477 aa8.38□□□□□ -1.07
HIF1A-209ENST00000556827 SFRP5Q5T4F7 317 aa8.38□□□□□ -1.07
HIF1A-209ENST00000556827 LETMD1Q6P1Q0 360 aa8.38□□□□□ -1.07
HIF1A-209ENST00000556827 SLC23A3Q6PIS1 610 aa8.38□□□□□ -1.07
HIF1A-209ENST00000556827 ATG4DQ86TL0 474 aaPredicted RBP8.38□□□□□ -1.07
HIF1A-209ENST00000556827 TMEM87AQ8NBN3 555 aa8.38□□□□□ -1.07
HIF1A-209ENST00000556827 LRRN4CLQ8ND94 238 aa8.38□□□□□ -1.07
HIF1A-209ENST00000556827 ZNF608Q9ULD9 1512 aaPredicted RBP8.38□□□□□ -1.07
HIF1A-209ENST00000556827 RECKO95980 971 aa8.37□□□□□ -1.07
HIF1A-209ENST00000556827 YBX3P16989 372 aaKnown RBP eCLIP8.37□□□□□ -1.07
HIF1A-209ENST00000556827 TFE3P19532 575 aaPredicted RBP8.37□□□□□ -1.07
HIF1A-209ENST00000556827 ZP2Q05996 745 aa8.37□□□□□ -1.07
HIF1A-209ENST00000556827 OGFOD2Q6N063 350 aa8.37□□□□□ -1.07
HIF1A-209ENST00000556827 ZNF746Q6NUN9 644 aaPredicted RBP8.37□□□□□ -1.07
HIF1A-209ENST00000556827 MFSD4AQ8N468 514 aa8.37□□□□□ -1.07
HIF1A-209ENST00000556827 JARID2Q92833 1246 aaPredicted RBP8.37□□□□□ -1.07
HIF1A-209ENST00000556827 BCL11AQ9H165 835 aa8.37□□□□□ -1.07
HIF1A-209ENST00000556827 PRDM7Q9NQW5 492 aa8.37□□□□□ -1.07
HIF1A-209ENST00000556827 PITPNM2Q9BZ72 1349 aa8.36□□□□□ -1.07
HIF1A-209ENST00000556827 TOPBP1Q92547 1522 aa8.36□□□□□ -1.07
HIF1A-209ENST00000556827 CST3P01034 146 aaPredicted RBP8.36□□□□□ -1.07
HIF1A-209ENST00000556827 PGRP06401 933 aa8.36□□□□□ -1.07
HIF1A-209ENST00000556827 ST13P50502 369 aaKnown RBP8.36□□□□□ -1.07
HIF1A-209ENST00000556827 CDKAL1Q5VV42 579 aa8.36□□□□□ -1.07
HIF1A-209ENST00000556827 DPH2Q9BQC3 489 aaPredicted RBP8.36□□□□□ -1.07
HIF1A-209ENST00000556827 NOC4LQ9BVI4 516 aaKnown RBP8.36□□□□□ -1.07
HIF1A-209ENST00000556827 TLR6Q9Y2C9 796 aa8.36□□□□□ -1.07
HIF1A-209ENST00000556827 TACC3Q9Y6A5 838 aa8.36□□□□□ -1.07
HIF1A-209ENST00000556827 PRR33A8MZF0 331 aa8.35□□□□□ -1.07
HIF1A-209ENST00000556827 GFRA2O00451 464 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms