RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 ANGEL1Q9UNK9 670 aaKnown RBP6.95□□□□□ -1.3
ATXN3-243ENST00000556671 DAGLAQ9Y4D2 1042 aa6.95□□□□□ -1.3
ATXN3-243ENST00000556671 PCDHGC5Q9Y5F6 944 aa6.95□□□□□ -1.3
ATXN3-243ENST00000556671 TCOF1Q13428 1488 aaKnown RBP6.95□□□□□ -1.3
ATXN3-243ENST00000556671 PREX1Q8TCU6 1659 aa6.95□□□□□ -1.3
ATXN3-243ENST00000556671 AGLP35573 1532 aa6.95□□□□□ -1.3
ATXN3-243ENST00000556671 REREQ9P2R6 1566 aa6.95□□□□□ -1.3
ATXN3-243ENST00000556671 ZMYM3Q14202 1370 aa6.95□□□□□ -1.3
ATXN3-243ENST00000556671 KIF15Q9NS87 1388 aa6.95□□□□□ -1.3
ATXN3-243ENST00000556671 MROH2AA6NES4 1674 aa6.94□□□□□ -1.3
ATXN3-243ENST00000556671 PNMA6FA0A0J9YX94 578 aa6.94□□□□□ -1.3
ATXN3-243ENST00000556671 SLFN14P0C7P3 912 aa6.94□□□□□ -1.3
ATXN3-243ENST00000556671 MAPK1P28482 360 aa6.94□□□□□ -1.3
ATXN3-243ENST00000556671 PLCB3Q01970 1234 aa6.94□□□□□ -1.3
ATXN3-243ENST00000556671 ID3Q02535 119 aa6.94□□□□□ -1.3
ATXN3-243ENST00000556671 PPP2R3AQ06190 1150 aa6.94□□□□□ -1.3
ATXN3-243ENST00000556671 PDZD3Q86UT5 571 aa6.94□□□□□ -1.3
ATXN3-243ENST00000556671 FANCD2OSQ96PS1 177 aa6.94□□□□□ -1.3
ATXN3-243ENST00000556671 ATXN3LQ9H3M9 355 aa6.94□□□□□ -1.3
ATXN3-243ENST00000556671 BSDC1Q9NW68 430 aaPredicted RBP6.94□□□□□ -1.3
ATXN3-243ENST00000556671 DUOX2Q9NRD8 1548 aa6.94□□□□□ -1.3
ATXN3-243ENST00000556671 KANK1Q14678 1352 aa6.94□□□□□ -1.3
ATXN3-243ENST00000556671 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.93□□□□□ -1.3
ATXN3-243ENST00000556671 OGFOD3Q6PK18 319 aa6.93□□□□□ -1.3
ATXN3-243ENST00000556671 NXPE4Q6UWF7 544 aa6.93□□□□□ -1.3
ATXN3-243ENST00000556671 ABI1Q8IZP0 508 aa6.93□□□□□ -1.3
ATXN3-243ENST00000556671 FMNL2Q96PY5 1086 aa6.93□□□□□ -1.3
ATXN3-243ENST00000556671 ZC3H7BQ9UGR2 993 aaKnown RBP6.93□□□□□ -1.3
ATXN3-243ENST00000556671 PLXNC1O60486 1568 aa6.93□□□□□ -1.3
ATXN3-243ENST00000556671 HNRNPUQ00839 825 aaKnown RBP eCLIP6.92□□□□□ -1.3
ATXN3-243ENST00000556671 SULF2Q8IWU5 870 aa6.92□□□□□ -1.3
ATXN3-243ENST00000556671 STK35Q8TDR2 534 aa6.92□□□□□ -1.3
ATXN3-243ENST00000556671 FBXL18Q96ME1 805 aa6.92□□□□□ -1.3
ATXN3-243ENST00000556671 LGR6Q9HBX8 967 aa6.92□□□□□ -1.3
ATXN3-243ENST00000556671 LRRC4CQ9HCJ2 640 aa6.92□□□□□ -1.3
ATXN3-243ENST00000556671 DISC1Q9NRI5 854 aa6.92□□□□□ -1.3
ATXN3-243ENST00000556671 CNTLNQ9NXG0 1405 aa6.92□□□□□ -1.3
ATXN3-243ENST00000556671 EIF2AK4Q9P2K8 1649 aaKnown RBP6.91□□□□□ -1.3
ATXN3-243ENST00000556671 C3orf58Q8NDZ4 430 aa6.91□□□□□ -1.3
ATXN3-243ENST00000556671 KCNB2Q92953 911 aa6.91□□□□□ -1.3
ATXN3-243ENST00000556671 PIDD1Q9HB75 910 aa6.91□□□□□ -1.3
ATXN3-243ENST00000556671 AKAP2Q9Y2D5 859 aa6.91□□□□□ -1.3
ATXN3-243ENST00000556671 MYO5BQ9ULV0 1848 aa6.91□□□□□ -1.3
ATXN3-243ENST00000556671 NCOA1Q15788 1441 aa6.91□□□□□ -1.3
ATXN3-243ENST00000556671 CAMSAP1Q5T5Y3 1602 aa6.9□□□□□ -1.3
ATXN3-243ENST00000556671 NME2P22392 152 aa6.9□□□□□ -1.3
ATXN3-243ENST00000556671 ARNTP27540 789 aa6.9□□□□□ -1.3
ATXN3-243ENST00000556671 KRTAP19-1Q8IUB9 90 aa6.9□□□□□ -1.3
ATXN3-243ENST00000556671 KRTAP1-3Q8IUG1 177 aa6.9□□□□□ -1.3
ATXN3-243ENST00000556671 SMYD4Q8IYR2 804 aaPredicted RBP6.9□□□□□ -1.3
ATXN3-243ENST00000556671 PTPRKQ15262 1439 aa6.9□□□□□ -1.31
ATXN3-243ENST00000556671 SHANK2Q9UPX8 1470 aa6.9□□□□□ -1.31
ATXN3-243ENST00000556671 FMR1Q06787 632 aaKnown RBP eCLIP6.89□□□□□ -1.31
ATXN3-243ENST00000556671 TTLL4Q14679 1199 aa6.89□□□□□ -1.31
ATXN3-243ENST00000556671 CYP27C1Q4G0S4 372 aa6.89□□□□□ -1.31
ATXN3-243ENST00000556671 CBLL1Q75N03 491 aa6.89□□□□□ -1.31
ATXN3-243ENST00000556671 FBF1Q8TES7 1133 aa6.89□□□□□ -1.31
ATXN3-243ENST00000556671 NECAB3Q96P71 396 aaPredicted RBP6.89□□□□□ -1.31
ATXN3-243ENST00000556671 GOLGA2P5Q9HBQ8 144 aa6.89□□□□□ -1.31
ATXN3-243ENST00000556671 CACNA2D2Q9NY47 1150 aa6.89□□□□□ -1.31
ATXN3-243ENST00000556671 UHRF1BP1Q6BDS2 1440 aa6.89□□□□□ -1.31
ATXN3-243ENST00000556671 ANKRD50Q9ULJ7 1429 aa6.89□□□□□ -1.31
ATXN3-243ENST00000556671 RNF17Q9BXT8 1623 aaKnown RBP6.89□□□□□ -1.31
ATXN3-243ENST00000556671 ZC3H13Q5T200 1668 aaKnown RBP6.89□□□□□ -1.31
ATXN3-243ENST00000556671 KDM5DQ9BY66 1539 aa6.88□□□□□ -1.31
ATXN3-243ENST00000556671 ERBINQ96RT1 1412 aa6.88□□□□□ -1.31
ATXN3-243ENST00000556671 NUP155O75694 1391 aa6.88□□□□□ -1.31
ATXN3-243ENST00000556671 TXKP42681 527 aa6.88□□□□□ -1.31
ATXN3-243ENST00000556671 ZNF252P-AS1Q0IIN9 211 aa6.88□□□□□ -1.31
ATXN3-243ENST00000556671 CDK5R2Q13319 367 aa6.88□□□□□ -1.31
ATXN3-243ENST00000556671 ZC3H12AQ5D1E8 599 aaKnown RBP6.88□□□□□ -1.31
ATXN3-243ENST00000556671 LCE3BQ5TA77 95 aa6.88□□□□□ -1.31
ATXN3-243ENST00000556671 TP53INP2Q8IXH6 220 aa6.88□□□□□ -1.31
ATXN3-243ENST00000556671 FLCNQ8NFG4 579 aa6.88□□□□□ -1.31
ATXN3-243ENST00000556671 EMILIN2Q9BXX0 1053 aa6.88□□□□□ -1.31
ATXN3-243ENST00000556671 SRCIN1Q9C0H9 1055 aa6.88□□□□□ -1.31
ATXN3-243ENST00000556671 PAK6Q9NQU5 681 aaPredicted RBP6.88□□□□□ -1.31
ATXN3-243ENST00000556671 IVNS1ABPQ9Y6Y0 642 aa6.88□□□□□ -1.31
ATXN3-243ENST00000556671 STRCQ7RTU9 1775 aa6.87□□□□□ -1.31
ATXN3-243ENST00000556671 GCC2Q8IWJ2 1684 aa6.87□□□□□ -1.31
ATXN3-243ENST00000556671 RRBP1Q9P2E9 1410 aaKnown RBP6.87□□□□□ -1.31
ATXN3-243ENST00000556671 TNRQ92752 1358 aa6.87□□□□□ -1.31
ATXN3-243ENST00000556671 RNGTTO60942 597 aaKnown RBP6.87□□□□□ -1.31
ATXN3-243ENST00000556671 NEFMP07197 916 aa6.87□□□□□ -1.31
ATXN3-243ENST00000556671 FAM87AP0C7U9 286 aa6.87□□□□□ -1.31
ATXN3-243ENST00000556671 HCLS1P14317 486 aaPredicted RBP6.87□□□□□ -1.31
ATXN3-243ENST00000556671 GSTT1P30711 240 aa6.87□□□□□ -1.31
ATXN3-243ENST00000556671 MAPK8P45983 427 aa6.87□□□□□ -1.31
ATXN3-243ENST00000556671 COL19A1Q14993 1142 aa6.87□□□□□ -1.31
ATXN3-243ENST00000556671 MAP1SQ66K74 1059 aaPredicted RBP6.87□□□□□ -1.31
ATXN3-243ENST00000556671 ZSCAN29Q8IWY8 852 aaPredicted RBP6.87□□□□□ -1.31
ATXN3-243ENST00000556671 AGBL5Q8NDL9 886 aa6.87□□□□□ -1.31
ATXN3-243ENST00000556671 ASB16Q96NS5 453 aa6.87□□□□□ -1.31
ATXN3-243ENST00000556671 OSBPL7Q9BZF2 842 aa6.87□□□□□ -1.31
ATXN3-243ENST00000556671 PCOLCE2Q9UKZ9 415 aa6.87□□□□□ -1.31
ATXN3-243ENST00000556671 RNF114Q9Y508 228 aa6.87□□□□□ -1.31
ATXN3-243ENST00000556671 MYO3AQ8NEV4 1616 aa6.87□□□□□ -1.31
ATXN3-243ENST00000556671 ABCC3O15438 1527 aa6.86□□□□□ -1.31
ATXN3-243ENST00000556671 ADGRL2O95490 1459 aa6.86□□□□□ -1.31
ATXN3-243ENST00000556671 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms