RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 KIF24Q5T7B8 1368 aa7.57□□□□□ -1.2
CPSF2-205ENST00000556622 MON2Q7Z3U7 1717 aa7.56□□□□□ -1.2
CPSF2-205ENST00000556622 CRB1P82279 1406 aa7.56□□□□□ -1.2
CPSF2-205ENST00000556622 ZBTB39O15060 712 aa7.56□□□□□ -1.2
CPSF2-205ENST00000556622 LILRB5O75023 590 aa7.56□□□□□ -1.2
CPSF2-205ENST00000556622 SCNN1AP37088 669 aa7.56□□□□□ -1.2
CPSF2-205ENST00000556622 RIPK4P57078 832 aa7.56□□□□□ -1.2
CPSF2-205ENST00000556622 DDB1Q16531 1140 aa7.56□□□□□ -1.2
CPSF2-205ENST00000556622 GTF3C2Q8WUA4 911 aaPredicted RBP7.56□□□□□ -1.2
CPSF2-205ENST00000556622 KRTAP4-9Q9BYQ8 210 aa7.56□□□□□ -1.2
CPSF2-205ENST00000556622 API5Q9BZZ5 524 aaKnown RBP7.56□□□□□ -1.2
CPSF2-205ENST00000556622 SLIT3O75094 1523 aa7.56□□□□□ -1.2
CPSF2-205ENST00000556622 ANKRD26Q9UPS8 1709 aa7.55□□□□□ -1.2
CPSF2-205ENST00000556622 MAP3K19Q56UN5 1328 aa7.55□□□□□ -1.2
CPSF2-205ENST00000556622 NRKQ7Z2Y5 1582 aa7.55□□□□□ -1.2
CPSF2-205ENST00000556622 VIRMAQ69YN4 1812 aaKnown RBP7.55□□□□□ -1.2
CPSF2-205ENST00000556622 HOXC9P31274 260 aa7.55□□□□□ -1.2
CPSF2-205ENST00000556622 SKOR2Q2VWA4 1001 aaPredicted RBP7.55□□□□□ -1.2
CPSF2-205ENST00000556622 CASC1Q6TDU7 716 aa7.55□□□□□ -1.2
CPSF2-205ENST00000556622 TBC1D32Q96NH3 1257 aa7.55□□□□□ -1.2
CPSF2-205ENST00000556622 PCMTD2Q9NV79 361 aa7.55□□□□□ -1.2
CPSF2-205ENST00000556622 IFT57Q9NWB7 429 aa7.55□□□□□ -1.2
CPSF2-205ENST00000556622 EGFL7Q9UHF1 273 aa7.55□□□□□ -1.2
CPSF2-205ENST00000556622 MTMR7Q9Y216 660 aa7.55□□□□□ -1.2
CPSF2-205ENST00000556622 LAS1LQ9Y4W2 734 aaKnown RBP7.55□□□□□ -1.2
CPSF2-205ENST00000556622 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.55□□□□□ -1.2
CPSF2-205ENST00000556622 COL5A2P05997 1499 aaPredicted RBP7.55□□□□□ -1.2
CPSF2-205ENST00000556622 BRWD3Q6RI45 1802 aa7.55□□□□□ -1.2
CPSF2-205ENST00000556622 RGPD5Q99666 1765 aa7.54□□□□□ -1.2
CPSF2-205ENST00000556622 TRIM37O94972 964 aa7.54□□□□□ -1.2
CPSF2-205ENST00000556622 IGHDP01880 384 aa7.54□□□□□ -1.2
CPSF2-205ENST00000556622 HOXD8P13378 290 aaPredicted RBP7.54□□□□□ -1.2
CPSF2-205ENST00000556622 ARID4AP29374 1257 aaPredicted RBP7.54□□□□□ -1.2
CPSF2-205ENST00000556622 ZAP70P43403 619 aa7.54□□□□□ -1.2
CPSF2-205ENST00000556622 RAC1P63000 192 aa7.54□□□□□ -1.2
CPSF2-205ENST00000556622 HSP90AB2PQ58FF8 381 aa7.54□□□□□ -1.2
CPSF2-205ENST00000556622 HSCBQ8IWL3 235 aa7.54□□□□□ -1.2
CPSF2-205ENST00000556622 TRPM4Q8TD43 1214 aa7.54□□□□□ -1.2
CPSF2-205ENST00000556622 PANK1Q8TE04 598 aa7.54□□□□□ -1.2
CPSF2-205ENST00000556622 PIK3R5Q8WYR1 880 aa7.54□□□□□ -1.2
CPSF2-205ENST00000556622 BHMTQ93088 406 aa7.54□□□□□ -1.2
CPSF2-205ENST00000556622 PLEKHF1Q96S99 279 aa7.54□□□□□ -1.2
CPSF2-205ENST00000556622 ZFATQ9P243 1243 aa7.54□□□□□ -1.2
CPSF2-205ENST00000556622 KAT6BQ8WYB5 2073 aa7.54□□□□□ -1.2
CPSF2-205ENST00000556622 NRAPQ86VF7 1730 aa7.54□□□□□ -1.2
CPSF2-205ENST00000556622 OVOS2A0A0J9YW53 1432 aa7.53□□□□□ -1.2
CPSF2-205ENST00000556622 OVOS2Q6IE36 1432 aa7.53□□□□□ -1.2
CPSF2-205ENST00000556622 GOLGA6L22H0YM25 854 aa7.53□□□□□ -1.2
CPSF2-205ENST00000556622 IL2RBP14784 551 aa7.53□□□□□ -1.2
CPSF2-205ENST00000556622 SSTR4P31391 388 aa7.53□□□□□ -1.2
CPSF2-205ENST00000556622 DEFB132Q7Z7B7 95 aa7.53□□□□□ -1.2
CPSF2-205ENST00000556622 ITPRIPQ8IWB1 547 aa7.53□□□□□ -1.2
CPSF2-205ENST00000556622 SMC5Q8IY18 1101 aa7.53□□□□□ -1.2
CPSF2-205ENST00000556622 DDX54Q8TDD1 881 aaKnown RBP7.53□□□□□ -1.2
CPSF2-205ENST00000556622 CHMP5Q9NZZ3 219 aa7.53□□□□□ -1.2
CPSF2-205ENST00000556622 COL18A1P39060 1754 aa7.53□□□□□ -1.2
CPSF2-205ENST00000556622 SOS1Q07889 1333 aaPredicted RBP7.52□□□□□ -1.2
CPSF2-205ENST00000556622 NFAT5O94916 1531 aa7.52□□□□□ -1.2
CPSF2-205ENST00000556622 LMO7Q8WWI1 1683 aa7.52□□□□□ -1.21
CPSF2-205ENST00000556622 XYLBO75191 536 aa7.52□□□□□ -1.21
CPSF2-205ENST00000556622 TARSP26639 723 aaKnown RBP7.52□□□□□ -1.21
CPSF2-205ENST00000556622 FKBP4Q02790 459 aaKnown RBP eCLIP7.52□□□□□ -1.21
CPSF2-205ENST00000556622 EXOSC9Q06265 439 aaKnown RBP7.52□□□□□ -1.21
CPSF2-205ENST00000556622 NFE2L2Q16236 605 aa7.52□□□□□ -1.21
CPSF2-205ENST00000556622 PCSK7Q16549 785 aa7.52□□□□□ -1.21
CPSF2-205ENST00000556622 ECM1Q16610 540 aa7.52□□□□□ -1.21
CPSF2-205ENST00000556622 XKR5Q6UX68 686 aa7.52□□□□□ -1.21
CPSF2-205ENST00000556622 RGL4Q8IZJ4 473 aa7.52□□□□□ -1.21
CPSF2-205ENST00000556622 FMR1NBQ8N0W7 255 aaPredicted RBP7.52□□□□□ -1.21
CPSF2-205ENST00000556622 MARCH10Q8NA82 808 aaPredicted RBP7.52□□□□□ -1.21
CPSF2-205ENST00000556622 NUDT8Q8WV74 236 aa7.52□□□□□ -1.21
CPSF2-205ENST00000556622 GBP4Q96PP9 640 aa7.52□□□□□ -1.21
CPSF2-205ENST00000556622 C22orf23Q9BZE7 217 aa7.52□□□□□ -1.21
CPSF2-205ENST00000556622 JPH1Q9HDC5 661 aaPredicted RBP7.52□□□□□ -1.21
CPSF2-205ENST00000556622 POLKQ9UBT6 870 aa7.52□□□□□ -1.21
CPSF2-205ENST00000556622 ARID1BQ8NFD5 2236 aaPredicted RBP7.51□□□□□ -1.21
CPSF2-205ENST00000556622 ZBTB42B2RXF5 422 aa7.51□□□□□ -1.21
CPSF2-205ENST00000556622 SASH3O75995 380 aa7.51□□□□□ -1.21
CPSF2-205ENST00000556622 FAM13AO94988 1023 aa7.51□□□□□ -1.21
CPSF2-205ENST00000556622 NFKB1P19838 968 aa7.51□□□□□ -1.21
CPSF2-205ENST00000556622 SOX18P35713 384 aa7.51□□□□□ -1.21
CPSF2-205ENST00000556622 IREB2P48200 963 aaKnown RBP7.51□□□□□ -1.21
CPSF2-205ENST00000556622 TBC1D8BQ0IIM8 1120 aa7.51□□□□□ -1.21
CPSF2-205ENST00000556622 TRIP4Q15650 581 aaPredicted RBP7.51□□□□□ -1.21
CPSF2-205ENST00000556622 NOM1Q5C9Z4 860 aaKnown RBP7.51□□□□□ -1.21
CPSF2-205ENST00000556622 BMP2KLQ5H9B9 411 aa7.51□□□□□ -1.21
CPSF2-205ENST00000556622 NBPF6Q5VWK0 638 aa7.51□□□□□ -1.21
CPSF2-205ENST00000556622 ALKBH2Q6NS38 261 aa7.51□□□□□ -1.21
CPSF2-205ENST00000556622 CMTR1Q8N1G2 835 aaKnown RBP7.51□□□□□ -1.21
CPSF2-205ENST00000556622 ZCRB1Q8TBF4 217 aaKnown RBP7.51□□□□□ -1.21
CPSF2-205ENST00000556622 WFDC12Q8WWY7 111 aa7.51□□□□□ -1.21
CPSF2-205ENST00000556622 SNX21Q969T3 373 aa7.51□□□□□ -1.21
CPSF2-205ENST00000556622 NBPF4Q96M43 638 aa7.51□□□□□ -1.21
CPSF2-205ENST00000556622 PNMA5Q96PV4 448 aa7.51□□□□□ -1.21
CPSF2-205ENST00000556622 ZBTB40Q9NUA8 1239 aa7.51□□□□□ -1.21
CPSF2-205ENST00000556622 TLR7Q9NYK1 1049 aaKnown RBP7.51□□□□□ -1.21
CPSF2-205ENST00000556622 FNDC3AQ9Y2H6 1198 aaKnown RBP7.51□□□□□ -1.21
CPSF2-205ENST00000556622 USP20Q9Y2K6 914 aa7.51□□□□□ -1.21
CPSF2-205ENST00000556622 RRP7AQ9Y3A4 280 aaKnown RBP7.51□□□□□ -1.21
CPSF2-205ENST00000556622 LTN1O94822 1766 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms