RNA–Protein interactions for RNA: ENST00000556462.1

LINC01550-206, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 2 BASIC

Gene LINC01550, Length 2,098 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-206ENST00000556462 STX6O43752 255 aa12.68□□□□□ -0.38
LINC01550-206ENST00000556462 DHX16O60231 1041 aaKnown RBP12.68□□□□□ -0.38
LINC01550-206ENST00000556462 RPS12P25398 132 aaKnown RBP12.68□□□□□ -0.38
LINC01550-206ENST00000556462 METAP2P50579 478 aaKnown RBP eCLIP12.68□□□□□ -0.38
LINC01550-206ENST00000556462 EIF6P56537 245 aaKnown RBP12.68□□□□□ -0.38
LINC01550-206ENST00000556462 IFIT1BQ5T764 474 aaKnown RBP12.68□□□□□ -0.38
LINC01550-206ENST00000556462 CLEC17AQ6ZS10 378 aa12.68□□□□□ -0.38
LINC01550-206ENST00000556462 DHX36Q9H2U1 1008 aaKnown RBP12.68□□□□□ -0.38
LINC01550-206ENST00000556462 ECM29Q5VYK3 1845 aa12.68□□□□□ -0.38
LINC01550-206ENST00000556462 PTPDC1A2A3K4 754 aa12.68□□□□□ -0.38
LINC01550-206ENST00000556462 ENTPD3O75355 529 aa12.68□□□□□ -0.38
LINC01550-206ENST00000556462 FDPSP14324 419 aaKnown RBP12.68□□□□□ -0.38
LINC01550-206ENST00000556462 YBX3P16989 372 aaKnown RBP eCLIP12.68□□□□□ -0.38
LINC01550-206ENST00000556462 LMNB1P20700 586 aa12.68□□□□□ -0.38
LINC01550-206ENST00000556462 MMP14P50281 582 aa12.68□□□□□ -0.38
LINC01550-206ENST00000556462 RCAN1P53805 252 aa12.68□□□□□ -0.38
LINC01550-206ENST00000556462 ZNF280AP59817 542 aaPredicted RBP12.68□□□□□ -0.38
LINC01550-206ENST00000556462 NTRK3Q16288 839 aa12.68□□□□□ -0.38
LINC01550-206ENST00000556462 LARP1BQ659C4 914 aaKnown RBP12.68□□□□□ -0.38
LINC01550-206ENST00000556462 ZNF654Q8IZM8 581 aa12.68□□□□□ -0.38
LINC01550-206ENST00000556462 ANKS1AQ92625 1134 aa12.68□□□□□ -0.38
LINC01550-206ENST00000556462 DPF2Q92785 391 aa12.68□□□□□ -0.38
LINC01550-206ENST00000556462 DDX11Q96FC9 970 aa12.68□□□□□ -0.38
LINC01550-206ENST00000556462 EHD4Q9H223 541 aa12.68□□□□□ -0.38
LINC01550-206ENST00000556462 ZNF70Q9UC06 446 aaPredicted RBP12.68□□□□□ -0.38
LINC01550-206ENST00000556462 NID2Q14112 1375 aa12.67□□□□□ -0.38
LINC01550-206ENST00000556462 WDR33Q9C0J8 1336 aaKnown RBP12.67□□□□□ -0.38
LINC01550-206ENST00000556462 CLRN2A0PK11 232 aa12.67□□□□□ -0.38
LINC01550-206ENST00000556462 WNT10BO00744 389 aa12.67□□□□□ -0.38
LINC01550-206ENST00000556462 PPFIA3O75145 1194 aa12.67□□□□□ -0.38
LINC01550-206ENST00000556462 TSPY3P0CV98 308 aa12.67□□□□□ -0.38
LINC01550-206ENST00000556462 TSPY8P0CW00 308 aa12.67□□□□□ -0.38
LINC01550-206ENST00000556462 SLURP2P0DP57 97 aa12.67□□□□□ -0.38
LINC01550-206ENST00000556462 HMGN5P82970 282 aaKnown RBP12.67□□□□□ -0.38
LINC01550-206ENST00000556462 TROAPQ12815 778 aa12.67□□□□□ -0.38
LINC01550-206ENST00000556462 SPDYE2Q495Y8 402 aa12.67□□□□□ -0.38
LINC01550-206ENST00000556462 FOXD4L5Q5VV16 416 aaPredicted RBP12.67□□□□□ -0.38
LINC01550-206ENST00000556462 SYNE3Q6ZMZ3 975 aa12.67□□□□□ -0.38
LINC01550-206ENST00000556462 DGKHQ86XP1 1220 aa12.67□□□□□ -0.38
LINC01550-206ENST00000556462 CCDC144CPQ8IYA2 1237 aa12.67□□□□□ -0.38
LINC01550-206ENST00000556462 NEDD1Q8NHV4 660 aa12.67□□□□□ -0.38
LINC01550-206ENST00000556462 FOXD4L4Q8WXT5 416 aaPredicted RBP12.67□□□□□ -0.38
LINC01550-206ENST00000556462 MYOZ2Q9NPC6 264 aa12.67□□□□□ -0.38
LINC01550-206ENST00000556462 MTMR6Q9Y217 621 aa12.67□□□□□ -0.38
LINC01550-206ENST00000556462 ZNF541Q9H0D2 1346 aa12.67□□□□□ -0.38
LINC01550-206ENST00000556462 GOLGA8AA7E2F4 631 aa12.66□□□□□ -0.38
LINC01550-206ENST00000556462 HLA-DOAP06340 250 aa12.66□□□□□ -0.38
LINC01550-206ENST00000556462 PDCP20941 246 aa12.66□□□□□ -0.38
LINC01550-206ENST00000556462 GMPSP49915 693 aaPredicted RBP12.66□□□□□ -0.38
LINC01550-206ENST00000556462 NBPF9Q3BBW0 867 aa12.66□□□□□ -0.38
LINC01550-206ENST00000556462 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.66□□□□□ -0.38
LINC01550-206ENST00000556462 DNAJC18Q9H819 358 aa12.66□□□□□ -0.38
LINC01550-206ENST00000556462 PI4KBQ9UBF8 816 aa12.66□□□□□ -0.38
LINC01550-206ENST00000556462 SWAP70Q9UH65 585 aa12.66□□□□□ -0.38
LINC01550-206ENST00000556462 ATRNL1Q5VV63 1379 aa12.66□□□□□ -0.38
LINC01550-206ENST00000556462 CPLX1O14810 134 aa12.66□□□□□ -0.38
LINC01550-206ENST00000556462 EGFRP00533 1210 aa12.66□□□□□ -0.38
LINC01550-206ENST00000556462 ZSCAN22P10073 491 aaPredicted RBP12.66□□□□□ -0.38
LINC01550-206ENST00000556462 PDIA4P13667 645 aaKnown RBP12.66□□□□□ -0.38
LINC01550-206ENST00000556462 SHMT1P34896 483 aa12.66□□□□□ -0.38
LINC01550-206ENST00000556462 METTL16Q86W50 562 aaKnown RBP12.66□□□□□ -0.38
LINC01550-206ENST00000556462 FANCBQ8NB91 859 aa12.66□□□□□ -0.38
LINC01550-206ENST00000556462 GJA3Q9Y6H8 435 aa12.66□□□□□ -0.38
LINC01550-206ENST00000556462 TCP10L2B9ZVM9 353 aa12.65□□□□□ -0.38
LINC01550-206ENST00000556462 MCM4P33991 863 aa12.65□□□□□ -0.38
LINC01550-206ENST00000556462 NOVP48745 357 aa12.65□□□□□ -0.38
LINC01550-206ENST00000556462 NBR1Q14596 966 aa12.65□□□□□ -0.38
LINC01550-206ENST00000556462 CCDC178Q5BJE1 867 aa12.65□□□□□ -0.38
LINC01550-206ENST00000556462 FKBP1CQ5VVH2 108 aa12.65□□□□□ -0.38
LINC01550-206ENST00000556462 FOXP4Q8IVH2 680 aaPredicted RBP12.65□□□□□ -0.38
LINC01550-206ENST00000556462 ZSCAN29Q8IWY8 852 aaPredicted RBP12.65□□□□□ -0.38
LINC01550-206ENST00000556462 NUP133Q8WUM0 1156 aa12.65□□□□□ -0.38
LINC01550-206ENST00000556462 TMOD2Q9NZR1 351 aa12.65□□□□□ -0.38
LINC01550-206ENST00000556462 CNOT7Q9UIV1 285 aaKnown RBP12.65□□□□□ -0.38
LINC01550-206ENST00000556462 CNTNAP1P78357 1384 aa12.65□□□□□ -0.38
LINC01550-206ENST00000556462 BAG4O95429 457 aaKnown RBP12.65□□□□□ -0.39
LINC01550-206ENST00000556462 CATIPQ7Z7H3 387 aa12.65□□□□□ -0.39
LINC01550-206ENST00000556462 MICALL2Q8IY33 904 aa12.65□□□□□ -0.39
LINC01550-206ENST00000556462 FAM184AQ8NB25 1140 aa12.65□□□□□ -0.39
LINC01550-206ENST00000556462 FAM151AQ8WW52 585 aa12.65□□□□□ -0.39
LINC01550-206ENST00000556462 COL2A1P02458 1487 aaPredicted RBP12.64□□□□□ -0.39
LINC01550-206ENST00000556462 DDAH1O94760 285 aa12.64□□□□□ -0.39
LINC01550-206ENST00000556462 AKR1B1P15121 316 aa12.64□□□□□ -0.39
LINC01550-206ENST00000556462 IFNAR1P17181 557 aa12.64□□□□□ -0.39
LINC01550-206ENST00000556462 PPP2R5BQ15173 497 aa12.64□□□□□ -0.39
LINC01550-206ENST00000556462 RTN1Q16799 776 aa12.64□□□□□ -0.39
LINC01550-206ENST00000556462 CEP95Q96GE4 821 aa12.64□□□□□ -0.39
LINC01550-206ENST00000556462 CHAMP1Q96JM3 812 aa12.64□□□□□ -0.39
LINC01550-206ENST00000556462 ORC3Q9UBD5 711 aaPredicted RBP12.64□□□□□ -0.39
LINC01550-206ENST00000556462 IGKV6D-41A0A0C4DH26 115 aa12.63□□□□□ -0.39
LINC01550-206ENST00000556462 CCDC196A0A1B0GTZ2 297 aa12.63□□□□□ -0.39
LINC01550-206ENST00000556462 VPS37CA5D8V6 355 aaPredicted RBP12.63□□□□□ -0.39
LINC01550-206ENST00000556462 FAM196BA6NMK8 535 aa12.63□□□□□ -0.39
LINC01550-206ENST00000556462 MYO1BO43795 1136 aa12.63□□□□□ -0.39
LINC01550-206ENST00000556462 F13A1P00488 732 aa12.63□□□□□ -0.39
LINC01550-206ENST00000556462 RBM26Q5T8P6 1007 aaKnown RBP12.63□□□□□ -0.39
LINC01550-206ENST00000556462 TATDN1Q6P1N9 297 aa12.63□□□□□ -0.39
LINC01550-206ENST00000556462 CPLX2Q6PUV4 134 aaKnown RBP12.63□□□□□ -0.39
LINC01550-206ENST00000556462 CDC37L1Q7L3B6 337 aa12.63□□□□□ -0.39
LINC01550-206ENST00000556462 SAMD7Q7Z3H4 446 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms