RNA–Protein interactions for RNA: ENST00000556284.1

MTHFD1-213, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 932 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-213ENST00000556284 RBM25P49756 843 aaKnown RBP11.92□□□□□ -0.5
MTHFD1-213ENST00000556284 NT5C2P49902 561 aa11.92□□□□□ -0.5
MTHFD1-213ENST00000556284 PLCD1P51178 756 aa11.92□□□□□ -0.5
MTHFD1-213ENST00000556284 HAND2P61296 217 aa11.92□□□□□ -0.5
MTHFD1-213ENST00000556284 KRT32Q14532 448 aa11.92□□□□□ -0.5
MTHFD1-213ENST00000556284 SH3BP5LQ7L8J4 393 aa11.92□□□□□ -0.5
MTHFD1-213ENST00000556284 METTL16Q86W50 562 aaKnown RBP11.92□□□□□ -0.5
MTHFD1-213ENST00000556284 LDHDQ86WU2 507 aa11.92□□□□□ -0.5
MTHFD1-213ENST00000556284 SULF1Q8IWU6 871 aa11.92□□□□□ -0.5
MTHFD1-213ENST00000556284 ZSCAN29Q8IWY8 852 aaPredicted RBP11.92□□□□□ -0.5
MTHFD1-213ENST00000556284 ZNF526Q8TF50 670 aaPredicted RBP11.92□□□□□ -0.5
MTHFD1-213ENST00000556284 HOOK2Q96ED9 719 aa11.92□□□□□ -0.5
MTHFD1-213ENST00000556284 TMEM39BQ9GZU3 492 aa11.92□□□□□ -0.5
MTHFD1-213ENST00000556284 EHD4Q9H223 541 aa11.92□□□□□ -0.5
MTHFD1-213ENST00000556284 RNF41Q9H4P4 317 aaPredicted RBP11.92□□□□□ -0.5
MTHFD1-213ENST00000556284 CYP2D7A0A087X1C5 515 aa11.91□□□□□ -0.5
MTHFD1-213ENST00000556284 FGRP09769 529 aa11.91□□□□□ -0.5
MTHFD1-213ENST00000556284 PDE4BQ07343 736 aa11.91□□□□□ -0.5
MTHFD1-213ENST00000556284 AKNAD1Q5T1N1 836 aa11.91□□□□□ -0.5
MTHFD1-213ENST00000556284 MFSD6Q6ZSS7 791 aa11.91□□□□□ -0.5
MTHFD1-213ENST00000556284 CDC37L1Q7L3B6 337 aa11.91□□□□□ -0.5
MTHFD1-213ENST00000556284 KRT26Q7Z3Y9 468 aa11.91□□□□□ -0.5
MTHFD1-213ENST00000556284 STAG1Q8WVM7 1258 aa11.91□□□□□ -0.5
MTHFD1-213ENST00000556284 IL17RAQ96F46 866 aa11.91□□□□□ -0.5
MTHFD1-213ENST00000556284 TEPSINQ96N21 525 aa11.91□□□□□ -0.5
MTHFD1-213ENST00000556284 TBC1D32Q96NH3 1257 aa11.91□□□□□ -0.5
MTHFD1-213ENST00000556284 CSRNP1Q96S65 589 aa11.91□□□□□ -0.5
MTHFD1-213ENST00000556284 ZNF287Q9HBT7 754 aa11.91□□□□□ -0.5
MTHFD1-213ENST00000556284 GPBP1L1Q9HC44 474 aaPredicted RBP11.91□□□□□ -0.5
MTHFD1-213ENST00000556284 SWAP70Q9UH65 585 aa11.91□□□□□ -0.5
MTHFD1-213ENST00000556284 SERPINB13Q9UIV8 391 aa11.91□□□□□ -0.5
MTHFD1-213ENST00000556284 TBC1D12O60347 775 aa11.9□□□□□ -0.5
MTHFD1-213ENST00000556284 MAP3K10Q02779 954 aa11.9□□□□□ -0.5
MTHFD1-213ENST00000556284 CTDSPL2Q05D32 466 aa11.9□□□□□ -0.5
MTHFD1-213ENST00000556284 GABPAQ06546 454 aa11.9□□□□□ -0.5
MTHFD1-213ENST00000556284 SUPT20HL1Q3ZLR7 823 aa11.9□□□□□ -0.5
MTHFD1-213ENST00000556284 C16orf86Q6ZW13 317 aa11.9□□□□□ -0.5
MTHFD1-213ENST00000556284 TRIM34Q9BYJ4 488 aa11.9□□□□□ -0.5
MTHFD1-213ENST00000556284 CNNM2Q9H8M5 875 aa11.9□□□□□ -0.5
MTHFD1-213ENST00000556284 HERC5Q9UII4 1024 aaKnown RBP11.9□□□□□ -0.5
MTHFD1-213ENST00000556284 SNX14Q9Y5W7 946 aa11.9□□□□□ -0.5
MTHFD1-213ENST00000556284 ROBO3Q96MS0 1386 aa11.9□□□□□ -0.5
MTHFD1-213ENST00000556284 E7EWF7 191 aa11.89□□□□□ -0.51
MTHFD1-213ENST00000556284 ORC4O43929 436 aa11.89□□□□□ -0.51
MTHFD1-213ENST00000556284 PSMA5P28066 241 aa11.89□□□□□ -0.51
MTHFD1-213ENST00000556284 TRDNQ13061 729 aa11.89□□□□□ -0.51
MTHFD1-213ENST00000556284 USP48Q86UV5 1035 aa11.89□□□□□ -0.51
MTHFD1-213ENST00000556284 TBC1D10CQ8IV04 446 aa11.89□□□□□ -0.51
MTHFD1-213ENST00000556284 CRACR2BQ8N4Y2 399 aaPredicted RBP11.89□□□□□ -0.51
MTHFD1-213ENST00000556284 IL27Q8NEV9 243 aa11.89□□□□□ -0.51
MTHFD1-213ENST00000556284 DYNLL2Q96FJ2 89 aa11.89□□□□□ -0.51
MTHFD1-213ENST00000556284 TM6SF1Q9BZW5 370 aa11.89□□□□□ -0.51
MTHFD1-213ENST00000556284 KRT23Q9C075 422 aa11.89□□□□□ -0.51
MTHFD1-213ENST00000556284 NBPF3Q9H094 633 aa11.89□□□□□ -0.51
MTHFD1-213ENST00000556284 SCAF8Q9UPN6 1271 aaKnown RBP11.89□□□□□ -0.51
MTHFD1-213ENST00000556284 ECM29Q5VYK3 1845 aa11.88□□□□□ -0.51
MTHFD1-213ENST00000556284 SMIM22K7EJ46 135 aa11.88□□□□□ -0.51
MTHFD1-213ENST00000556284 HMGB1P09429 215 aaKnown RBP11.88□□□□□ -0.51
MTHFD1-213ENST00000556284 YY1P25490 414 aa11.88□□□□□ -0.51
MTHFD1-213ENST00000556284 CDK8P49336 464 aa11.88□□□□□ -0.51
MTHFD1-213ENST00000556284 SLC4A8Q2Y0W8 1093 aa11.88□□□□□ -0.51
MTHFD1-213ENST00000556284 NBPF12Q5TAG4 269 aaPredicted RBP11.88□□□□□ -0.51
MTHFD1-213ENST00000556284 DCAF15Q66K64 600 aa11.88□□□□□ -0.51
MTHFD1-213ENST00000556284 MAP1SQ66K74 1059 aaPredicted RBP11.88□□□□□ -0.51
MTHFD1-213ENST00000556284 NCOA7Q8NI08 942 aa11.88□□□□□ -0.51
MTHFD1-213ENST00000556284 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.88□□□□□ -0.51
MTHFD1-213ENST00000556284 MKNK2Q9HBH9 465 aa11.88□□□□□ -0.51
MTHFD1-213ENST00000556284 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.88□□□□□ -0.51
MTHFD1-213ENST00000556284 ARIH1Q9Y4X5 557 aaPredicted RBP11.88□□□□□ -0.51
MTHFD1-213ENST00000556284 TAF6LQ9Y6J9 622 aa11.88□□□□□ -0.51
MTHFD1-213ENST00000556284 FOCADQ5VW36 1801 aa11.88□□□□□ -0.51
MTHFD1-213ENST00000556284 ADM5C9JUS6 153 aa11.87□□□□□ -0.51
MTHFD1-213ENST00000556284 SHMT1P34896 483 aa11.87□□□□□ -0.51
MTHFD1-213ENST00000556284 TATDN1Q6P1N9 297 aa11.87□□□□□ -0.51
MTHFD1-213ENST00000556284 STOX1Q6ZVD7 989 aa11.87□□□□□ -0.51
MTHFD1-213ENST00000556284 RALYLQ86SE5 291 aaKnown RBP11.87□□□□□ -0.51
MTHFD1-213ENST00000556284 CDAN1Q8IWY9 1227 aa11.87□□□□□ -0.51
MTHFD1-213ENST00000556284 ZNF444Q8N0Y2 327 aaPredicted RBP11.87□□□□□ -0.51
MTHFD1-213ENST00000556284 SLAIN1Q8ND83 568 aa11.87□□□□□ -0.51
MTHFD1-213ENST00000556284 ESR2Q92731 530 aa11.87□□□□□ -0.51
MTHFD1-213ENST00000556284 CCDC17Q96LX7 622 aa11.87□□□□□ -0.51
MTHFD1-213ENST00000556284 JAKMIP1Q96N16 626 aaKnown RBP11.87□□□□□ -0.51
MTHFD1-213ENST00000556284 NEK1Q96PY6 1258 aa11.87□□□□□ -0.51
MTHFD1-213ENST00000556284 TOMM22Q9NS69 142 aa11.87□□□□□ -0.51
MTHFD1-213ENST00000556284 TACC3Q9Y6A5 838 aa11.87□□□□□ -0.51
MTHFD1-213ENST00000556284 CDK5RAP2Q96SN8 1893 aa11.87□□□□□ -0.51
MTHFD1-213ENST00000556284 PRDM1O75626 825 aa11.86□□□□□ -0.51
MTHFD1-213ENST00000556284 NF2P35240 595 aa11.86□□□□□ -0.51
MTHFD1-213ENST00000556284 ADCK5Q3MIX3 580 aa11.86□□□□□ -0.51
MTHFD1-213ENST00000556284 RRP12Q5JTH9 1297 aaKnown RBP11.86□□□□□ -0.51
MTHFD1-213ENST00000556284 PRAMEF18Q5VWM3 479 aa11.86□□□□□ -0.51
MTHFD1-213ENST00000556284 MIGA2Q7L4E1 593 aa11.86□□□□□ -0.51
MTHFD1-213ENST00000556284 STK11IPQ8N1F8 1099 aa11.86□□□□□ -0.51
MTHFD1-213ENST00000556284 SLC44A5Q8NCS7 719 aa11.86□□□□□ -0.51
MTHFD1-213ENST00000556284 CDCA5Q96FF9 252 aa11.86□□□□□ -0.51
MTHFD1-213ENST00000556284 KIF2CQ99661 725 aa11.86□□□□□ -0.51
MTHFD1-213ENST00000556284 MTA3Q9BTC8 594 aa11.86□□□□□ -0.51
MTHFD1-213ENST00000556284 ZNF341Q9BYN7 854 aa11.86□□□□□ -0.51
MTHFD1-213ENST00000556284 GLIS2Q9BZE0 524 aaPredicted RBP11.86□□□□□ -0.51
MTHFD1-213ENST00000556284 DNAJC18Q9H819 358 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms