RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 USP17L2Q6R6M4 530 aa9.47□□□□□ -0.89
PTCSC3-201ENST00000556013 AACSQ86V21 672 aa9.47□□□□□ -0.89
PTCSC3-201ENST00000556013 MAGEB6Q8N7X4 407 aa9.47□□□□□ -0.89
PTCSC3-201ENST00000556013 U2AF1L4Q8WU68 220 aaKnown RBP9.47□□□□□ -0.89
PTCSC3-201ENST00000556013 C12orf42Q96LP6 360 aa9.47□□□□□ -0.89
PTCSC3-201ENST00000556013 DNAJC18Q9H819 358 aa9.47□□□□□ -0.89
PTCSC3-201ENST00000556013 ZBTB40Q9NUA8 1239 aa9.47□□□□□ -0.89
PTCSC3-201ENST00000556013 SERPINB13Q9UIV8 391 aa9.47□□□□□ -0.89
PTCSC3-201ENST00000556013 USP5P45974 858 aa9.46□□□□□ -0.9
PTCSC3-201ENST00000556013 DYNLL1P63167 89 aaKnown RBP9.46□□□□□ -0.9
PTCSC3-201ENST00000556013 IRX3P78415 501 aaPredicted RBP9.46□□□□□ -0.9
PTCSC3-201ENST00000556013 PDE3AQ14432 1141 aa9.46□□□□□ -0.9
PTCSC3-201ENST00000556013 CCDC84Q86UT8 332 aaPredicted RBP9.46□□□□□ -0.9
PTCSC3-201ENST00000556013 TRMT44Q8IYL2 757 aaKnown RBP9.46□□□□□ -0.9
PTCSC3-201ENST00000556013 ANKLE1Q8NAG6 615 aa9.46□□□□□ -0.9
PTCSC3-201ENST00000556013 GPRC5AQ8NFJ5 357 aa9.46□□□□□ -0.9
PTCSC3-201ENST00000556013 PANK1Q8TE04 598 aa9.46□□□□□ -0.9
PTCSC3-201ENST00000556013 SHISA4Q96DD7 197 aa9.46□□□□□ -0.9
PTCSC3-201ENST00000556013 P2RX7Q99572 595 aaKnown RBP9.46□□□□□ -0.9
PTCSC3-201ENST00000556013 RIOK1Q9BRS2 568 aaKnown RBP9.46□□□□□ -0.9
PTCSC3-201ENST00000556013 CRISPLD2Q9H0B8 497 aa9.46□□□□□ -0.9
PTCSC3-201ENST00000556013 CABP5Q9NP86 173 aa9.46□□□□□ -0.9
PTCSC3-201ENST00000556013 PAK6Q9NQU5 681 aaPredicted RBP9.46□□□□□ -0.9
PTCSC3-201ENST00000556013 TLR7Q9NYK1 1049 aaKnown RBP9.46□□□□□ -0.9
PTCSC3-201ENST00000556013 ZBTB21Q9ULJ3 1066 aa9.46□□□□□ -0.9
PTCSC3-201ENST00000556013 EXOC6BQ9Y2D4 811 aa9.46□□□□□ -0.9
PTCSC3-201ENST00000556013 NR2E3Q9Y5X4 410 aa9.46□□□□□ -0.9
PTCSC3-201ENST00000556013 PHIPQ8WWQ0 1821 aa9.45□□□□□ -0.9
PTCSC3-201ENST00000556013 DOCK1Q14185 1865 aa9.45□□□□□ -0.9
PTCSC3-201ENST00000556013 INHAP05111 366 aa9.45□□□□□ -0.9
PTCSC3-201ENST00000556013 MAPK4P31152 587 aa9.45□□□□□ -0.9
PTCSC3-201ENST00000556013 HERVK_113P62684 666 aa9.45□□□□□ -0.9
PTCSC3-201ENST00000556013 MTMR2Q13614 643 aa9.45□□□□□ -0.9
PTCSC3-201ENST00000556013 CERKLQ49MI3 558 aaPredicted RBP9.45□□□□□ -0.9
PTCSC3-201ENST00000556013 LBX2Q6XYB7 198 aa9.45□□□□□ -0.9
PTCSC3-201ENST00000556013 SOCS4Q8WXH5 440 aa9.45□□□□□ -0.9
PTCSC3-201ENST00000556013 NUDT12Q9BQG2 462 aa9.45□□□□□ -0.9
PTCSC3-201ENST00000556013 UNC93B1Q9H1C4 597 aa9.45□□□□□ -0.9
PTCSC3-201ENST00000556013 ANTXR1Q9H6X2 564 aa9.45□□□□□ -0.9
PTCSC3-201ENST00000556013 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.45□□□□□ -0.9
PTCSC3-201ENST00000556013 RABGAP1Q9Y3P9 1069 aa9.45□□□□□ -0.9
PTCSC3-201ENST00000556013 RPTORQ8N122 1335 aa9.45□□□□□ -0.9
PTCSC3-201ENST00000556013 PTPRFP10586 1907 aa9.44□□□□□ -0.9
PTCSC3-201ENST00000556013 MAGEB6P1A0A0J9YX57 407 aa9.44□□□□□ -0.9
PTCSC3-201ENST00000556013 USP17L15C9J2P7 530 aa9.44□□□□□ -0.9
PTCSC3-201ENST00000556013 USP17L13C9JLJ4 530 aa9.44□□□□□ -0.9
PTCSC3-201ENST00000556013 USP17L11C9JVI0 530 aa9.44□□□□□ -0.9
PTCSC3-201ENST00000556013 USP17L18D6R9N7 530 aa9.44□□□□□ -0.9
PTCSC3-201ENST00000556013 USP17L22D6RA61 530 aa9.44□□□□□ -0.9
PTCSC3-201ENST00000556013 USP17L17D6RBQ6 530 aa9.44□□□□□ -0.9
PTCSC3-201ENST00000556013 USP17L19D6RCP7 530 aa9.44□□□□□ -0.9
PTCSC3-201ENST00000556013 USP17L20D6RJB6 530 aa9.44□□□□□ -0.9
PTCSC3-201ENST00000556013 MYCP01106 439 aaPredicted RBP9.44□□□□□ -0.9
PTCSC3-201ENST00000556013 TFRCP02786 760 aaKnown RBP9.44□□□□□ -0.9
PTCSC3-201ENST00000556013 HMGCRP04035 888 aa9.44□□□□□ -0.9
PTCSC3-201ENST00000556013 IFIT2P09913 472 aaKnown RBP9.44□□□□□ -0.9
PTCSC3-201ENST00000556013 JAG1P78504 1218 aa9.44□□□□□ -0.9
PTCSC3-201ENST00000556013 GABPAQ06546 454 aa9.44□□□□□ -0.9
PTCSC3-201ENST00000556013 USP17L24Q0WX57 530 aa9.44□□□□□ -0.9
PTCSC3-201ENST00000556013 SLC9C2Q5TAH2 1124 aa9.44□□□□□ -0.9
PTCSC3-201ENST00000556013 MIGA1Q8NAN2 632 aa9.44□□□□□ -0.9
PTCSC3-201ENST00000556013 DPF3Q92784 378 aa9.44□□□□□ -0.9
PTCSC3-201ENST00000556013 CRNKL1Q9BZJ0 848 aaKnown RBP9.44□□□□□ -0.9
PTCSC3-201ENST00000556013 KIAA1683Q9H0B3 1180 aa9.44□□□□□ -0.9
PTCSC3-201ENST00000556013 HMX1Q9NP08 348 aaPredicted RBP9.44□□□□□ -0.9
PTCSC3-201ENST00000556013 EMILIN3Q9NT22 766 aa9.44□□□□□ -0.9
PTCSC3-201ENST00000556013 RBPJLQ9UBG7 517 aa9.44□□□□□ -0.9
PTCSC3-201ENST00000556013 DOCK3Q8IZD9 2030 aa9.44□□□□□ -0.9
PTCSC3-201ENST00000556013 GLRX3O76003 335 aaKnown RBP9.43□□□□□ -0.9
PTCSC3-201ENST00000556013 ECM2O94769 699 aaPredicted RBP9.43□□□□□ -0.9
PTCSC3-201ENST00000556013 FARP2O94887 1054 aaPredicted RBP9.43□□□□□ -0.9
PTCSC3-201ENST00000556013 GH2P01242 217 aa9.43□□□□□ -0.9
PTCSC3-201ENST00000556013 POLR3DP05423 398 aaPredicted RBP9.43□□□□□ -0.9
PTCSC3-201ENST00000556013 ELNP15502 786 aa9.43□□□□□ -0.9
PTCSC3-201ENST00000556013 ATP5JP18859 108 aa9.43□□□□□ -0.9
PTCSC3-201ENST00000556013 ERVK-9P63128 1117 aa9.43□□□□□ -0.9
PTCSC3-201ENST00000556013 ERVK-24P63145 666 aa9.43□□□□□ -0.9
PTCSC3-201ENST00000556013 CCNA1P78396 465 aa9.43□□□□□ -0.9
PTCSC3-201ENST00000556013 ABCB5Q2M3G0 1257 aa9.43□□□□□ -0.9
PTCSC3-201ENST00000556013 MAP3K21Q5TCX8 1036 aa9.43□□□□□ -0.9
PTCSC3-201ENST00000556013 CATSPERGQ6ZRH7 1159 aa9.43□□□□□ -0.9
PTCSC3-201ENST00000556013 SIRT2Q8IXJ6 389 aa9.43□□□□□ -0.9
PTCSC3-201ENST00000556013 USP6NLQ92738 828 aa9.43□□□□□ -0.9
PTCSC3-201ENST00000556013 DEFB118Q96PH6 123 aa9.43□□□□□ -0.9
PTCSC3-201ENST00000556013 IL1RAPL2Q9NP60 686 aa9.43□□□□□ -0.9
PTCSC3-201ENST00000556013 ATP8A2Q9NTI2 1148 aa9.43□□□□□ -0.9
PTCSC3-201ENST00000556013 HOXC10Q9NYD6 342 aa9.43□□□□□ -0.9
PTCSC3-201ENST00000556013 SWAP70Q9UH65 585 aa9.43□□□□□ -0.9
PTCSC3-201ENST00000556013 SAP30BPQ9UHR5 308 aaKnown RBP9.43□□□□□ -0.9
PTCSC3-201ENST00000556013 RCAN3Q9UKA8 241 aa9.43□□□□□ -0.9
PTCSC3-201ENST00000556013 MGAMO43451 1857 aa9.42□□□□□ -0.9
PTCSC3-201ENST00000556013 A0A1W2PPC1 479 aa9.42□□□□□ -0.9
PTCSC3-201ENST00000556013 TCRBV5S4A2TA0A5A2 114 aa9.42□□□□□ -0.9
PTCSC3-201ENST00000556013 H0YGN5 161 aa9.42□□□□□ -0.9
PTCSC3-201ENST00000556013 GDF11O95390 407 aa9.42□□□□□ -0.9
PTCSC3-201ENST00000556013 PDE6AP16499 860 aa9.42□□□□□ -0.9
PTCSC3-201ENST00000556013 PLCD1P51178 756 aa9.42□□□□□ -0.9
PTCSC3-201ENST00000556013 UBE3CQ15386 1083 aa9.42□□□□□ -0.9
PTCSC3-201ENST00000556013 Q3C1V9 767 aa9.42□□□□□ -0.9
PTCSC3-201ENST00000556013 NECAB2Q7Z6G3 386 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms