RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 TACC3Q9Y6A5 838 aa13.01□□□□□ -0.33
TMEM260-208ENST00000555905 SIPA1L1O43166 1804 aa13.01□□□□□ -0.33
TMEM260-208ENST00000555905 POLR2AP24928 1970 aaKnown RBP13.01□□□□□ -0.33
TMEM260-208ENST00000555905 ERICH2A1L162 156 aa13□□□□□ -0.33
TMEM260-208ENST00000555905 TSPY2A6NKD2 308 aa13□□□□□ -0.33
TMEM260-208ENST00000555905 POTECB2RU33 542 aa13□□□□□ -0.33
TMEM260-208ENST00000555905 EXOSC10Q01780 885 aaKnown RBP13□□□□□ -0.33
TMEM260-208ENST00000555905 BECN1Q14457 450 aa13□□□□□ -0.33
TMEM260-208ENST00000555905 ANKRD1Q15327 319 aa13□□□□□ -0.33
TMEM260-208ENST00000555905 METTL16Q86W50 562 aaKnown RBP13□□□□□ -0.33
TMEM260-208ENST00000555905 IQCA1Q86XH1 822 aa13□□□□□ -0.33
TMEM260-208ENST00000555905 HSCBQ8IWL3 235 aa13□□□□□ -0.33
TMEM260-208ENST00000555905 UBAC1Q9BSL1 405 aa13□□□□□ -0.33
TMEM260-208ENST00000555905 ALDH8A1Q9H2A2 487 aaPredicted RBP13□□□□□ -0.33
TMEM260-208ENST00000555905 RRAGCQ9HB90 399 aa13□□□□□ -0.33
TMEM260-208ENST00000555905 ZSWIM5Q9P217 1185 aa13□□□□□ -0.33
TMEM260-208ENST00000555905 SCAF8Q9UPN6 1271 aaKnown RBP13□□□□□ -0.33
TMEM260-208ENST00000555905 TBC1D12O60347 775 aa12.99□□□□□ -0.33
TMEM260-208ENST00000555905 TSPY3P0CV98 308 aa12.99□□□□□ -0.33
TMEM260-208ENST00000555905 TSPY8P0CW00 308 aa12.99□□□□□ -0.33
TMEM260-208ENST00000555905 RASA1P20936 1047 aa12.99□□□□□ -0.33
TMEM260-208ENST00000555905 TFAP4Q01664 338 aa12.99□□□□□ -0.33
TMEM260-208ENST00000555905 Q6ZUG5 572 aa12.99□□□□□ -0.33
TMEM260-208ENST00000555905 CYB5R4Q7L1T6 521 aa12.99□□□□□ -0.33
TMEM260-208ENST00000555905 CHST3Q7LGC8 479 aa12.99□□□□□ -0.33
TMEM260-208ENST00000555905 KRT26Q7Z3Y9 468 aa12.99□□□□□ -0.33
TMEM260-208ENST00000555905 SNX21Q969T3 373 aa12.99□□□□□ -0.33
TMEM260-208ENST00000555905 TMEM87BQ96K49 555 aa12.99□□□□□ -0.33
TMEM260-208ENST00000555905 CCDC17Q96LX7 622 aa12.99□□□□□ -0.33
TMEM260-208ENST00000555905 TCEANC2Q96MN5 208 aa12.99□□□□□ -0.33
TMEM260-208ENST00000555905 TTC14Q96N46 770 aa12.99□□□□□ -0.33
TMEM260-208ENST00000555905 MTA3Q9BTC8 594 aa12.99□□□□□ -0.33
TMEM260-208ENST00000555905 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.99□□□□□ -0.33
TMEM260-208ENST00000555905 PGAP2Q9UHJ9 254 aa12.99□□□□□ -0.33
TMEM260-208ENST00000555905 IFIT3O14879 490 aaKnown RBP12.98□□□□□ -0.33
TMEM260-208ENST00000555905 SHMT1P34896 483 aa12.98□□□□□ -0.33
TMEM260-208ENST00000555905 AK2P54819 239 aa12.98□□□□□ -0.33
TMEM260-208ENST00000555905 ANTXR2P58335 489 aa12.98□□□□□ -0.33
TMEM260-208ENST00000555905 COL9A3Q14050 684 aaPredicted RBP12.98□□□□□ -0.33
TMEM260-208ENST00000555905 SUPT20HL1Q3ZLR7 823 aa12.98□□□□□ -0.33
TMEM260-208ENST00000555905 CERKLQ49MI3 558 aaPredicted RBP12.98□□□□□ -0.33
TMEM260-208ENST00000555905 CCDC178Q5BJE1 867 aa12.98□□□□□ -0.33
TMEM260-208ENST00000555905 TMEM67Q5HYA8 995 aa12.98□□□□□ -0.33
TMEM260-208ENST00000555905 FAM47AQ5JRC9 791 aa12.98□□□□□ -0.33
TMEM260-208ENST00000555905 DCAF15Q66K64 600 aa12.98□□□□□ -0.33
TMEM260-208ENST00000555905 ZNF526Q8TF50 670 aaPredicted RBP12.98□□□□□ -0.33
TMEM260-208ENST00000555905 TEPSINQ96N21 525 aa12.98□□□□□ -0.33
TMEM260-208ENST00000555905 LRRC2Q9BYS8 371 aa12.98□□□□□ -0.33
TMEM260-208ENST00000555905 FAM196BA6NMK8 535 aa12.97□□□□□ -0.33
TMEM260-208ENST00000555905 NBPF12Q5TAG4 269 aaPredicted RBP12.97□□□□□ -0.33
TMEM260-208ENST00000555905 TATDN1Q6P1N9 297 aa12.97□□□□□ -0.33
TMEM260-208ENST00000555905 MIGA2Q7L4E1 593 aa12.97□□□□□ -0.33
TMEM260-208ENST00000555905 CDAN1Q8IWY9 1227 aa12.97□□□□□ -0.33
TMEM260-208ENST00000555905 FBXL16Q8N461 479 aa12.97□□□□□ -0.33
TMEM260-208ENST00000555905 ZSCAN10Q96SZ4 725 aaPredicted RBP12.97□□□□□ -0.33
TMEM260-208ENST00000555905 DNAJC18Q9H819 358 aa12.97□□□□□ -0.33
TMEM260-208ENST00000555905 DAXXQ9UER7 740 aaPredicted RBP12.97□□□□□ -0.33
TMEM260-208ENST00000555905 ANGEL1Q9UNK9 670 aaKnown RBP12.97□□□□□ -0.33
TMEM260-208ENST00000555905 LIMCH1Q9UPQ0 1083 aa12.97□□□□□ -0.33
TMEM260-208ENST00000555905 ADM5C9JUS6 153 aa12.96□□□□□ -0.33
TMEM260-208ENST00000555905 MPHOSPH10O00566 681 aaKnown RBP12.96□□□□□ -0.33
TMEM260-208ENST00000555905 SH2B2O14492 632 aaPredicted RBP12.96□□□□□ -0.33
TMEM260-208ENST00000555905 MAP3K10Q02779 954 aa12.96□□□□□ -0.33
TMEM260-208ENST00000555905 TOB2Q14106 344 aaPredicted RBP12.96□□□□□ -0.33
TMEM260-208ENST00000555905 WTAPQ15007 396 aa12.96□□□□□ -0.33
TMEM260-208ENST00000555905 PPP4R3BQ5MIZ7 849 aa12.96□□□□□ -0.33
TMEM260-208ENST00000555905 NOL8Q76FK4 1167 aaKnown RBP12.96□□□□□ -0.33
TMEM260-208ENST00000555905 CDC37L1Q7L3B6 337 aa12.96□□□□□ -0.33
TMEM260-208ENST00000555905 USP48Q86UV5 1035 aa12.96□□□□□ -0.33
TMEM260-208ENST00000555905 LDHDQ86WU2 507 aa12.96□□□□□ -0.33
TMEM260-208ENST00000555905 TMTC2Q8N394 836 aa12.96□□□□□ -0.33
TMEM260-208ENST00000555905 NEDD1Q8NHV4 660 aa12.96□□□□□ -0.33
TMEM260-208ENST00000555905 NKX2-3Q8TAU0 364 aa12.96□□□□□ -0.33
TMEM260-208ENST00000555905 IGDCC4Q8TDY8 1250 aa12.96□□□□□ -0.33
TMEM260-208ENST00000555905 BRF1Q92994 677 aa12.96□□□□□ -0.33
TMEM260-208ENST00000555905 ZKSCAN3Q9BRR0 538 aa12.96□□□□□ -0.33
TMEM260-208ENST00000555905 AGXT2Q9BYV1 514 aa12.96□□□□□ -0.33
TMEM260-208ENST00000555905 NMRK2Q9NPI5 230 aa12.96□□□□□ -0.33
TMEM260-208ENST00000555905 TCP11L1Q9NUJ3 509 aa12.96□□□□□ -0.33
TMEM260-208ENST00000555905 PLIN4Q96Q06 1357 aa12.95□□□□□ -0.34
TMEM260-208ENST00000555905 TNKSO95271 1327 aa12.95□□□□□ -0.34
TMEM260-208ENST00000555905 CCDC69A6NI79 296 aa12.95□□□□□ -0.34
TMEM260-208ENST00000555905 K7ELQ4 463 aaPredicted RBP12.95□□□□□ -0.34
TMEM260-208ENST00000555905 CD2BP2O95400 341 aaKnown RBP12.95□□□□□ -0.34
TMEM260-208ENST00000555905 SLURP2P0DP57 97 aa12.95□□□□□ -0.34
TMEM260-208ENST00000555905 AKR1B1P15121 316 aa12.95□□□□□ -0.34
TMEM260-208ENST00000555905 LIFRP42702 1097 aa12.95□□□□□ -0.34
TMEM260-208ENST00000555905 ABCB5Q2M3G0 1257 aa12.95□□□□□ -0.34
TMEM260-208ENST00000555905 IFIT1BQ5T764 474 aaKnown RBP12.95□□□□□ -0.34
TMEM260-208ENST00000555905 PRAMEF18Q5VWM3 479 aa12.95□□□□□ -0.34
TMEM260-208ENST00000555905 NFXL1Q6ZNB6 911 aa12.95□□□□□ -0.34
TMEM260-208ENST00000555905 ZSCAN31Q96LW9 406 aaPredicted RBP12.95□□□□□ -0.34
TMEM260-208ENST00000555905 ZNF341Q9BYN7 854 aa12.95□□□□□ -0.34
TMEM260-208ENST00000555905 TBC1D2Q9BYX2 928 aa12.95□□□□□ -0.34
TMEM260-208ENST00000555905 LY9Q9HBG7 655 aa12.95□□□□□ -0.34
TMEM260-208ENST00000555905 CABP5Q9NP86 173 aa12.95□□□□□ -0.34
TMEM260-208ENST00000555905 NMT2O60551 498 aa12.94□□□□□ -0.34
TMEM260-208ENST00000555905 NF2P35240 595 aa12.94□□□□□ -0.34
TMEM260-208ENST00000555905 APOBRQ0VD83 1088 aa12.94□□□□□ -0.34
TMEM260-208ENST00000555905 SYNE3Q6ZMZ3 975 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms